Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e12r
         (315 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF175689-1|AAD51842.1| 1048|Drosophila melanogaster heparan sulf...    27   5.0  
AE014296-1120|AAF50658.1| 1048|Drosophila melanogaster CG8339-PA...    27   5.0  
M83207-1|AAA28513.1|  470|Drosophila melanogaster escargot-encod...    26   8.8  
AY113549-1|AAM29554.1|  381|Drosophila melanogaster RE70461p pro...    26   8.8  
AY071590-1|AAL49212.1|  470|Drosophila melanogaster RE64266p pro...    26   8.8  
AE014298-2925|AAF49014.1|  381|Drosophila melanogaster CG14234-P...    26   8.8  
AE014134-2597|AAF53458.1|  470|Drosophila melanogaster CG3758-PA...    26   8.8  

>AF175689-1|AAD51842.1| 1048|Drosophila melanogaster heparan sulfate
           N-deacetylase/N-sulfotransferase homolog protein.
          Length = 1048

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -3

Query: 151 KHCSFSPVVLREFNGRKHYIKVDCRRHDSTNSVRHYISLSKTDNCCS 11
           K  S  PV L E   R H  +VD    +  + VRH    SKT NC S
Sbjct: 711 KLASAPPVQLAEMYFRLHPEEVDPVWGNPCDDVRHKKIWSKTKNCDS 757


>AE014296-1120|AAF50658.1| 1048|Drosophila melanogaster CG8339-PA
           protein.
          Length = 1048

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -3

Query: 151 KHCSFSPVVLREFNGRKHYIKVDCRRHDSTNSVRHYISLSKTDNCCS 11
           K  S  PV L E   R H  +VD    +  + VRH    SKT NC S
Sbjct: 711 KLASAPPVQLAEMYFRLHPEEVDPVWGNPCDDVRHKKIWSKTKNCDS 757


>M83207-1|AAA28513.1|  470|Drosophila melanogaster escargot-encoded
           protein protein.
          Length = 470

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 35  QTYVMSYGVGAIMAAAVNFDIMLPAIKFP*YDWAEAAMLP 154
           QT   +    A +AAA    +++P   +P Y W    M P
Sbjct: 98  QTQAAALAAAAAVAAAAAASVVVPTPTYPKYPWNNFHMSP 137


>AY113549-1|AAM29554.1|  381|Drosophila melanogaster RE70461p
           protein.
          Length = 381

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 315 GIVYLVRSYCDLRIMGFFTALIVNIVGGAVL 223
           GIVY +  Y  LR +GF + L+V   G  +L
Sbjct: 57  GIVYALLGYRCLRAVGFLSGLLVGANGIFIL 87


>AY071590-1|AAL49212.1|  470|Drosophila melanogaster RE64266p
           protein.
          Length = 470

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 35  QTYVMSYGVGAIMAAAVNFDIMLPAIKFP*YDWAEAAMLP 154
           QT   +    A +AAA    +++P   +P Y W    M P
Sbjct: 98  QTQAAALAAAAAVAAAAAASVVVPTPTYPKYPWNNFHMSP 137


>AE014298-2925|AAF49014.1|  381|Drosophila melanogaster CG14234-PA
           protein.
          Length = 381

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 315 GIVYLVRSYCDLRIMGFFTALIVNIVGGAVL 223
           GIVY +  Y  LR +GF + L+V   G  +L
Sbjct: 57  GIVYALLGYRCLRAVGFLSGLLVGANGIFIL 87


>AE014134-2597|AAF53458.1|  470|Drosophila melanogaster CG3758-PA
           protein.
          Length = 470

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +2

Query: 35  QTYVMSYGVGAIMAAAVNFDIMLPAIKFP*YDWAEAAMLP 154
           QT   +    A +AAA    +++P   +P Y W    M P
Sbjct: 98  QTQAAALAAAAAVAAAAAASVVVPTPTYPKYPWNNFHMSP 137


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,244,180
Number of Sequences: 53049
Number of extensions: 307263
Number of successful extensions: 689
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 631882260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)