Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e12f
         (372 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061058-1|AAL28606.1|  516|Drosophila melanogaster LD02646p pro...    29   2.6  
AE013599-648|AAF59092.1|  516|Drosophila melanogaster CG2110-PA ...    29   2.6  
AE014296-3186|AAF49132.2| 1319|Drosophila melanogaster CG8793-PA...    28   4.5  
AF175689-1|AAD51842.1| 1048|Drosophila melanogaster heparan sulf...    27   7.9  
AE014296-1120|AAF50658.1| 1048|Drosophila melanogaster CG8339-PA...    27   7.9  

>AY061058-1|AAL28606.1|  516|Drosophila melanogaster LD02646p
           protein.
          Length = 516

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 321 IQNVLTSSSYLFLTNLCNVLRSWCYHG 241
           IQN+L+SSS L+  +L + LR W   G
Sbjct: 91  IQNILSSSSLLYKEHLYSFLRPWLGDG 117


>AE013599-648|AAF59092.1|  516|Drosophila melanogaster CG2110-PA
           protein.
          Length = 516

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 321 IQNVLTSSSYLFLTNLCNVLRSWCYHG 241
           IQN+L+SSS L+  +L + LR W   G
Sbjct: 91  IQNILSSSSLLYKEHLYSFLRPWLGDG 117


>AE014296-3186|AAF49132.2| 1319|Drosophila melanogaster CG8793-PA
           protein.
          Length = 1319

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 277 VCQKQITAARQYILDLKCLKFRNKYDEMGKK 369
           VC+ Q  A R  +L ++CLK    Y E+ K+
Sbjct: 499 VCKLQQFATRATLLSMECLKTARLYSEVAKQ 529


>AF175689-1|AAD51842.1| 1048|Drosophila melanogaster heparan sulfate
           N-deacetylase/N-sulfotransferase homolog protein.
          Length = 1048

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = +3

Query: 165 KHCSFSPVVLREFNGRKHYIKVDCRRHDSTNSVRHYISLSKTDNCCS 305
           K  S  PV L E   R H  +VD    +  + VRH    SKT NC S
Sbjct: 711 KLASAPPVQLAEMYFRLHPEEVDPVWGNPCDDVRHKKIWSKTKNCDS 757


>AE014296-1120|AAF50658.1| 1048|Drosophila melanogaster CG8339-PA
           protein.
          Length = 1048

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = +3

Query: 165 KHCSFSPVVLREFNGRKHYIKVDCRRHDSTNSVRHYISLSKTDNCCS 305
           K  S  PV L E   R H  +VD    +  + VRH    SKT NC S
Sbjct: 711 KLASAPPVQLAEMYFRLHPEEVDPVWGNPCDDVRHKKIWSKTKNCDS 757


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,018,960
Number of Sequences: 53049
Number of extensions: 371571
Number of successful extensions: 762
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)