Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11e11f
(601 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 33 0.19
At5g15860.2 68418.m01856 expressed protein 31 0.58
At5g15860.1 68418.m01855 expressed protein 31 0.58
At2g37925.1 68415.m04655 copper transporter family protein simil... 31 0.77
At3g62680.1 68416.m07041 proline-rich family protein contains pr... 30 1.3
At1g26120.1 68414.m03188 esterase-related contains similaity to ... 29 1.8
At3g48050.2 68416.m05239 bromo-adjacent homology (BAH) domain-co... 29 2.4
At3g48050.1 68416.m05238 bromo-adjacent homology (BAH) domain-co... 29 2.4
At3g20460.1 68416.m02590 sugar transporter, putative similar to ... 29 2.4
At3g02410.1 68416.m00228 hypothetical protein weak similarity to... 29 2.4
At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin fa... 29 3.1
At4g16260.1 68417.m02466 glycosyl hydrolase family 17 protein si... 28 4.1
At3g18810.1 68416.m02389 protein kinase family protein contains ... 28 4.1
At3g48060.1 68416.m05240 bromo-adjacent homology (BAH) domain-co... 28 5.4
At1g26390.1 68414.m03219 FAD-binding domain-containing protein s... 28 5.4
At1g07440.1 68414.m00794 tropinone reductase, putative / tropine... 28 5.4
At4g21585.1 68417.m03124 bifunctional nuclease, putative similar... 27 7.2
At3g55160.1 68416.m06126 expressed protein 27 7.2
At3g07900.1 68416.m00965 expressed protein contains Pfam PF03138... 27 7.2
At1g16830.1 68414.m02023 pentatricopeptide (PPR) repeat-containi... 27 7.2
At4g28680.1 68417.m04098 tyrosine decarboxylase, putative simila... 27 9.5
At4g20160.1 68417.m02949 expressed protein ; expression supporte... 27 9.5
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t... 27 9.5
At2g16650.1 68415.m01911 expressed protein 27 9.5
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 32.7 bits (71), Expect = 0.19
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -2
Query: 591 PTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPL-TAVLYRPLARPRQSTTIT 415
P P L P +T+P LPPP N PTL P+ T +Y+P P T T
Sbjct: 63 PPVHKPTLSPPVYTKPTLPPPAYTPPV----YNKPTLPAPVYTPPVYKPTLSPPVYTKPT 118
Query: 414 L 412
L
Sbjct: 119 L 119
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/69 (28%), Positives = 27/69 (39%)
Frame = -2
Query: 594 LPTTCAPKLKPIKWTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTTIT 415
LP P L P +T+P L P + N P+L P +Y+P P T T
Sbjct: 120 LPPVFKPTLSPPVYTKPTLSPTVYKPTLSPPVNNKPSLSPP----VYKPTLSPPVYTKPT 175
Query: 414 LQSETASKA 388
L K+
Sbjct: 176 LPPPVYKKS 184
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 600 PAL-PTTCAPKLKPIKWTRPQLPPPL 526
P+L P P L P +T+P LPPP+
Sbjct: 155 PSLSPPVYKPTLSPPVYTKPTLPPPV 180
>At5g15860.2 68418.m01856 expressed protein
Length = 299
Score = 31.1 bits (67), Expect = 0.58
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 299 SNYNGNLPLFVIVHG--WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 472
SN +G P+ V V G W G A +++ L A D V +D+R G + V
Sbjct: 149 SNNDGLKPVVVFVTGGAWII-GYKAWGSLLGMQL-AERDIIVACLDYRNFPQGTISDMVT 206
Query: 473 GVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSLGAHVVGNA 598
F+ N I+ GG+ R++L+G S GAH+ A
Sbjct: 207 DASQGISFVCNN----ISAFGGDPNRIYLMGQSAGAHIAACA 244
>At5g15860.1 68418.m01855 expressed protein
Length = 427
Score = 31.1 bits (67), Expect = 0.58
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 299 SNYNGNLPLFVIVHG--WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVN 472
SN +G P+ V V G W G A +++ L A D V +D+R G + V
Sbjct: 149 SNNDGLKPVVVFVTGGAWII-GYKAWGSLLGMQL-AERDIIVACLDYRNFPQGTISDMVT 206
Query: 473 GVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSLGAHVVGNA 598
F+ N I+ GG+ R++L+G S GAH+ A
Sbjct: 207 DASQGISFVCNN----ISAFGGDPNRIYLMGQSAGAHIAACA 244
>At2g37925.1 68415.m04655 copper transporter family protein similar
to SP|Q39065 Copper transporter 1 (COPT1) {Arabidopsis
thaliana}; contains Pfam profile PF04145: Ctr copper
transporter family; supporting cDNA
gi|18496855|gb|AF466372.1|
Length = 145
Score = 30.7 bits (66), Expect = 0.77
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +2
Query: 329 VIVHGWNSNGNSAVNTMIRPALLAVS-----DCNVIVVDWRGLANGLYNTAV 469
V+V WN+ + T RP+LL + +C V+ W G G+Y A+
Sbjct: 8 VVVEAWNTTTTTQTQTPHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALAL 59
>At3g62680.1 68416.m07041 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 313
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -2
Query: 591 PTTCAPKLKPIKWTRPQLPPPLLMSQT-KKLP-RNCPTLGTPL-TAVLYRPLARP 436
P P L P +T+P +PPP+ K P PT+ P+ T +Y+P P
Sbjct: 97 PPVYKPTLSPPVYTKPTIPPPVYTPPVYKPTPVYTKPTIPPPVYTPPVYKPTPSP 151
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = -2
Query: 591 PTTCAPKLKPIKWTRPQLPPPL----LMSQTKKLP-RNCPTLGTPL-TAVLYRPLARPRQ 430
P P L P +T+P +PPP+ + T P PT+ P+ T +Y+P P
Sbjct: 49 PPVYKPTLSPPVYTKPTIPPPVYTPPVYKHTPSPPVYTKPTIPPPVYTPPVYKPTLSPPV 108
Query: 429 STTITL 412
T T+
Sbjct: 109 YTKPTI 114
>At1g26120.1 68414.m03188 esterase-related contains similaity to
esterase 6 GI:606998 from [Drosophila simulans] and
esterase GI:12584120 from [Sphingomonas elodea]
Length = 476
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +2
Query: 395 LAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSL 574
L+ D V +D+R G + V S F+ N + GG+ R++L+G S
Sbjct: 232 LSERDIIVACIDYRNFPQGSISDMVKDASSGISFVCNHIA----EYGGDPDRIYLMGQSA 287
Query: 575 GAHV 586
GAH+
Sbjct: 288 GAHI 291
>At3g48050.2 68416.m05239 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 586 NVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNS 473
N+ A A+++ +P+A+ V +P V E S GN+
Sbjct: 776 NLLASVAADEMSKSPVASPSVSQPPNSVMNENSTVGNN 813
>At3g48050.1 68416.m05238 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 586 NVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNS 473
N+ A A+++ +P+A+ V +P V E S GN+
Sbjct: 776 NLLASVAADEMSKSPVASPSVSQPPNSVMNENSTVGNN 813
>At3g20460.1 68416.m02590 sugar transporter, putative similar to
ERD6 protein [Arabidopsis thaliana] GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 488
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +2
Query: 362 SAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLV-----WLIN 526
SA+N+++ A +AV+ V+ W+ LA ++ VP V +F+G F + WL
Sbjct: 181 SAINSLVMCASVAVTYLLGSVISWQKLA------LISTVPCVFEFVGLFFIPESPRWLSR 234
Query: 527 NG 532
NG
Sbjct: 235 NG 236
>At3g02410.1 68416.m00228 hypothetical protein weak similarity to
kynurenine formamidase [Mus musculus] GI:21552719
Length = 422
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 395 LAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSL 574
LA D V +D+R G + V+ F+ N I+ GG+ R++L+G S
Sbjct: 176 LAERDIIVACLDYRNFPQGTISDMVSDAAQGISFVCNN----ISAFGGDPNRIYLMGQSA 231
Query: 575 GAHV 586
GAH+
Sbjct: 232 GAHI 235
>At5g15780.1 68418.m01845 pollen Ole e 1 allergen and extensin
family protein contains Pfam profile PF01190: Pollen
proteins Ole e I family
Length = 401
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = -2
Query: 600 PALPTTCAPKLKPIKW--TRPQLP--PPLLMSQTKKLPRNCPTLGTPLTAV 460
P LPT P L PI T P LP PP+ + LP P+ PL V
Sbjct: 314 PLLPTPPTPTLPPIPTIPTLPPLPVLPPVPIVNPPSLPPPPPSFPVPLPPV 364
>At4g16260.1 68417.m02466 glycosyl hydrolase family 17 protein
similar to glucan endo-1,3-beta-glucosidase, basic
vacuolar isoform precursor SP:P52407 from [Hevea
brasiliensis]
Length = 306
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 227 WLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 373
W +R QN + + +++ S G+LP+ V GW SNG +A +
Sbjct: 222 WDGSRGYQNLFDALLDVVYSAVERSG-GGSLPVVVSESGWPSNGGNAAS 269
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +2
Query: 200 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVN 373
+ NG NN N NN NGN N+ N+N N N +G N+NGN+ N
Sbjct: 87 NNNGNNNN----DNNNGNNKDNNNNGNNNNGNNNNGNDN-------NGNNNNGNNNDN 133
>At3g48060.1 68416.m05240 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1611
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 586 NVRAQAEANQVDSTPIAASVVDEPDQKVAKELSDTGNS 473
N+ A A+++ +P+A+ V +P + E S GN+
Sbjct: 776 NLLASVAADEMSKSPVASPSVSQPPNSLMNENSTVGNN 813
>At1g26390.1 68414.m03219 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 530
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 13 QHEAPTSAGWLNSIVFWQCYP 75
+HE WLNS +FW YP
Sbjct: 330 KHEDCQEMSWLNSTLFWADYP 350
>At1g07440.1 68414.m00794 tropinone reductase, putative / tropine
dehydrogenase, putative similar to tropinone reductase
SP:P50165 from [Datura stramonium]
Length = 266
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -1
Query: 592 TDNVRAQAEANQVDSTPIAASVVDEPDQKV 503
+D +RA A A V +TP+A +V D+ +KV
Sbjct: 184 SDGIRANAVAPAVIATPLAEAVYDDEFKKV 213
>At4g21585.1 68417.m03124 bifunctional nuclease, putative similar to
bifunctional nuclease [Zinnia elegans]
gi|4099833|gb|AAD00694
Length = 299
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 164 DLEEPAEEDILMSRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGNLPLFV 331
D+ +P L G N + RR N H V N + S + YN +LPL +
Sbjct: 151 DIHQPLHVGFL-GDEGGNTITVRWYRRKTNLHHVWDNMIIESALKTYYNKSLPLMI 205
>At3g55160.1 68416.m06126 expressed protein
Length = 2149
Score = 27.5 bits (58), Expect = 7.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 40 WLNSIVFWQCYPHDPWRQQ 96
WL+S ++ CYP P+R++
Sbjct: 762 WLSSFLYLSCYPSAPYRRK 780
>At3g07900.1 68416.m00965 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'auxin-independent growth promoter -related' based on
similarity to axi 1 protein (GB:X80301) (GI:559920) from
[Nicotiana tabacum], which, due to scienitific fraud was
retracted. Retraction in: Schell J. EMBO J 1999 May
17;18(10):2908. PMID:10400497.
Length = 579
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = -2
Query: 525 LMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQSTTITLQSETASKAGRIMVFTAEFPLLF 346
+ S +KL CP +T +L R L PR + E + T+EFP L+
Sbjct: 397 MTSNERKLAGLCPLNAKEVTRLL-RALGAPRDARIYWAGGEPLGGKEALKPLTSEFPHLY 455
Query: 345 QPWTI 331
+ I
Sbjct: 456 NKYDI 460
>At1g16830.1 68414.m02023 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 738
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -1
Query: 286 VDIAICNNLMVVLV---TSGEKPVLVVCTVP*HKDVFLGRFFQVNEVRNTLAIRHPNVSA 116
VD+ + + VL + G P +V+C + H LGRF + +V +L R
Sbjct: 423 VDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQ 482
Query: 115 YTF 107
YTF
Sbjct: 483 YTF 485
>At4g28680.1 68417.m04098 tyrosine decarboxylase, putative similar
to SP|P54768 Tyrosine/DOPA decarboxylase 1 [Includes:
DOPA decarboxylase (EC 4.1.1.28) (DDC); Tyrosine
decarboxylase (EC 4.1.1.25)] {Papaver somniferum},
SP|Q06086 Tyrosine decarboxylase 2 (EC 4.1.1.25)
{Petroselinum crispum}; contains Pfam profile PF00282:
Pyridoxal-dependent decarboxylase conserved domain
Length = 545
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 236 TRRNQNNHQVITNGNVNSIRNSNYNGN 316
T +N TNGN ++ N NYNGN
Sbjct: 14 TGNGYSNGNGYTNGNGHTNGNGNYNGN 40
>At4g20160.1 68417.m02949 expressed protein ; expression supported
by MPSS
Length = 1188
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 245 NQNNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCN 415
N N + N NV +I + + NL +FV H N + +V+ ++ ++ AV +C+
Sbjct: 33 NNNKKKNNNNNNVRNIHVAAFEKNLNVFVRDH--LENCSVSVDDVVDDSIKAVPECS 87
>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
enhancer of zeste-like protein 1(EZA1) (GI:4185507)
[Arabidopsis thaliana]; similar to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 856
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 379 DPPRLAGRLRLQRYCCGLAWSCQRSIQHCRQWSSQCRT 492
D P L ++YC G + SC+ + C SQCR+
Sbjct: 620 DCPCLTNETCCEKYC-GCSKSCKNRFRGCHCAKSQCRS 656
>At2g16650.1 68415.m01911 expressed protein
Length = 511
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 310 WKPASLCYCPRLEQQRKLRCEHH 378
+ PA LC+C +LE ++ E H
Sbjct: 149 YAPALLCFCEKLEAEKGYEVEEH 171
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,489,820
Number of Sequences: 28952
Number of extensions: 332317
Number of successful extensions: 1384
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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