Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e09r
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    24   1.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   6.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.0  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 504 RLITLTSQGTINIDRTD 554
           ++ITLT  G +NID  D
Sbjct: 192 QMITLTFNGAVNIDNID 208


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 504 RLITLTSQGTINIDRTD 554
           ++ITLT  G +N+D  D
Sbjct: 185 QMITLTFNGAVNVDNID 201


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 467 CCVFAFFMIIWQTSDHL 517
           CC+  F  + WQ + +L
Sbjct: 16  CCILFFIYLYWQQTSNL 32


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 13/55 (23%), Positives = 27/55 (49%)
 Frame = -2

Query: 652 YSELKEINSASNDMAVADSYREYCRYMDGKCKPSVLSILIVPWLVKVIRRLPDYH 488
           +  L +   A    A A+  +++C+ +D   + S++   I+P  VK +   P+ H
Sbjct: 289 FQNLLKDTEAEVRAAAANKVKDFCQNLDKAHQESIIMNNILP-CVKELVADPNQH 342


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -2

Query: 469 AWDYFRSKRRNYSYRSDDSYRTDLESKLEDGFH 371
           AWD F + ++ ++Y  + S  ++  +     FH
Sbjct: 547 AWDKFTNMQQQFAYIDESSNSSNYFANKTYDFH 579


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,970
Number of Sequences: 336
Number of extensions: 3568
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)