Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e09r
         (755 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    24   1.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    24   1.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   4.1  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   9.4  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   9.4  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   9.4  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 95  KHCDLLFVFIQKRSIIKKNTIRFPNKYANTSQISRIFF 208
           +HC+L  +  +K++  +    +FP +      ISRIFF
Sbjct: 387 QHCEL-HMQPRKKNCCRSWLSKFPTRSKRIDVISRIFF 423


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 95  KHCDLLFVFIQKRSIIKKNTIRFPNKYANTSQISRIFF 208
           +HC+L  +  +K++  +    +FP +      ISRIFF
Sbjct: 387 QHCEL-HMQPRKKNCCRSWLSKFPTRSKRIDVISRIFF 423


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -2

Query: 583 CRYMDGKCKPSVLSILIVPWL 521
           C  +   C+P V + ++  WL
Sbjct: 645 CTKLTADCQPGVTAFIVTSWL 665


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -3

Query: 507 DVCQIIIKKAKTQHGITSEA 448
           D+C  ++   +++HG+T+ A
Sbjct: 63  DMCPDVMSAGESKHGLTNTA 82


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -3

Query: 507 DVCQIIIKKAKTQHGITSEA 448
           D+C  ++   +++HG+T+ A
Sbjct: 68  DMCPDVMSAGESKHGLTNTA 87


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -3

Query: 507 DVCQIIIKKAKTQHGITSEA 448
           D+C  ++   +++HG+T+ A
Sbjct: 68  DMCPDVMSAGESKHGLTNTA 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,915
Number of Sequences: 438
Number of extensions: 4188
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)