Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e09f
         (614 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0584 + 4345134-4345237,4346165-4346267,4346397-4346466,434...    45   6e-05
03_06_0300 + 32967935-32968029,32968975-32969077,32969175-329692...    39   8e-04
05_07_0116 - 27785083-27786123,27786201-27786278,27786364-277869...    35   0.059
09_06_0072 - 20682424-20682870,20683928-20684854                       30   1.7  
01_06_0367 + 28789824-28790110,28790204-28790744                       30   1.7  
09_04_0310 + 16578679-16580936,16581027-16581294                       27   8.9  
01_06_0109 - 26526691-26526775,26526894-26527019,26527228-265273...    27   8.9  

>07_01_0584 +
           4345134-4345237,4346165-4346267,4346397-4346466,
           4346552-4346590,4346684-4346801,4346894-4346951,
           4347031-4347095,4347281-4347341,4347678-4347779,
           4348005-4348070,4348399-4348443,4348540-4348797,
           4349289-4349501,4350103-4350411,4350461-4350613
          Length = 587

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
 Frame = +1

Query: 439 DRQTTGIVLWSEPIVTRFNDQKVAVVLMDTQGTFDN--SSTVRDSSTIFALSTLLSSIQI 612
           D +T GI +W  PI    N  KV+V+ +DT+G F++   S V D   IFAL+T+LSSI I
Sbjct: 101 DTKTKGIWVWGTPIELDVNGSKVSVLYLDTEG-FESIGKSNVYD-DRIFALATVLSSILI 158


>03_06_0300 +
           32967935-32968029,32968975-32969077,32969175-32969244,
           32969464-32969581,32969687-32969744,32969831-32969895,
           32969990-32969996,32970087-32970147,32970757-32970776,
           32970858-32970923,32971126-32971293,32971372-32971629,
           32972098-32972310,32972824-32973099
          Length = 525

 Score = 38.7 bits (86), Expect(2) = 8e-04
 Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
 Frame = +1

Query: 454 GIVLWSEPIVTRFNDQKVAVVLMDTQGTFDN--SSTVRDSSTIFALSTLLSSIQI 612
           GI +W  P+    +  KV+V+ +DT+G F++   S V D   IFAL+T+LSS+ I
Sbjct: 90  GIWIWGTPVEMDIDGSKVSVLYLDTEG-FESVGKSNVYD-DRIFALATVLSSVLI 142



 Score = 21.4 bits (43), Expect(2) = 8e-04
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 304 YRGGKSFLLDFFL 342
           YR GKSFLL+  L
Sbjct: 71  YRSGKSFLLNQLL 83


>05_07_0116 -
           27785083-27786123,27786201-27786278,27786364-27786976,
           27787128-27787213,27787316-27787438,27787600-27787734,
           27787930-27788019,27788796-27788981,27789560-27789661,
           27789787-27789900,27790010-27790153,27790260-27790325,
           27790895-27791056,27791668-27791916
          Length = 1062

 Score = 34.7 bits (76), Expect = 0.059
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = +1

Query: 448 TTGIVLWSEPIV-TRFNDQKVAVVLMDTQGTFDNSSTVRDSSTIFALSTLLSSIQI 612
           T G+ +WS P+  T  +  +  +VL+DT+G      T   S  IF+L+ LLSS+ I
Sbjct: 101 TKGLWMWSAPLKRTGLDGTEYNLVLLDTEGIDAYDQTGTYSIQIFSLAVLLSSMFI 156


>09_06_0072 - 20682424-20682870,20683928-20684854
          Length = 457

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = -3

Query: 429 PPNESRQRLVFLAQPRSTITRRGGRF*VSEEEVQQEG 319
           PPN+  Q  VFL  P S   RR G F V  E +  +G
Sbjct: 283 PPNQRMQLEVFLTLPESDYNRRLGVFQVRAEFLSADG 319


>01_06_0367 + 28789824-28790110,28790204-28790744
          Length = 275

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 385 WLGQEDEPLTGFIWRAGCDRQTT 453
           W  +EDE L  F+ R GCDR  T
Sbjct: 25  WTPEEDEVLARFVAREGCDRWRT 47


>09_04_0310 + 16578679-16580936,16581027-16581294
          Length = 841

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 318 LSTAVDASDADYDHRKVLDLI 256
           L TA+ AS+A YD R +LD I
Sbjct: 544 LETAIRASNAQYDDRDILDRI 564


>01_06_0109 -
           26526691-26526775,26526894-26527019,26527228-26527370,
           26527521-26527555,26527676-26527791,26527868-26527936,
           26528070-26528173,26528253-26528338,26528429-26528530,
           26528609-26528662,26528763-26528840,26528936-26528973,
           26529235-26529344,26529463-26529506,26530232-26530280
          Length = 412

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/50 (24%), Positives = 28/50 (56%)
 Frame = -3

Query: 402 VFLAQPRSTITRRGGRF*VSEEEVQQEGLSTAVDASDADYDHRKVLDLIS 253
           ++L+   + + +  GRF    +EV + G  +  +A+   Y+HR + D+++
Sbjct: 207 LYLSTKNTILKKYDGRFKDIFQEVYEAGWKSKFEAAGIWYEHRLIDDMVA 256


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,342,221
Number of Sequences: 37544
Number of extensions: 304311
Number of successful extensions: 829
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)