Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e09f
         (614 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    28   0.28 
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           27   0.36 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   1.5  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   3.4  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 27.9 bits (59), Expect = 0.28
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 450 CLTVATSPPNESRQRLVFLAQP 385
           CL+  T PP   RQRLV L +P
Sbjct: 534 CLSRGTFPPQWKRQRLVLLPKP 555


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 27.5 bits (58), Expect = 0.36
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -3

Query: 453 SCLTVATSPPNESRQRLVFLAQP 385
           SCL  AT P    RQRLV L +P
Sbjct: 525 SCLETATFPAPWKRQRLVLLPKP 547


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -3

Query: 450 CLTVATSPPNESRQRLVFLAQP 385
           CL   T P    RQRLV L +P
Sbjct: 481 CLNTGTFPQQWKRQRLVLLPKP 502


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 450 CLTVATSPPNESRQRLVFLAQ 388
           CLT  T P    RQRLV L++
Sbjct: 473 CLTRGTFPSEWKRQRLVLLSK 493


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,334
Number of Sequences: 2352
Number of extensions: 12535
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)