Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e09f
         (614 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.4  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   2.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.4  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   5.5  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   5.5  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   5.5  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   7.2  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -3

Query: 345 SEEEVQQEGLSTAVDASDADYDHRKVLDLISQ*DHP*CIL 226
           SEE  Q++G S +V        + ++ DL+   +HP C++
Sbjct: 307 SEETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFEHP-CVM 345


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -3

Query: 345 SEEEVQQEGLSTAVDASDADYDHRKVLDLISQ*DHP*CIL 226
           SEE  Q++G S +V        + ++ DL+   +HP C++
Sbjct: 222 SEETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFEHP-CVM 260


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -3

Query: 345 SEEEVQQEGLSTAVDASDADYDHRKVLDLISQ*DHP*CIL 226
           SEE  Q++G S +V        + ++ DL+   +HP C++
Sbjct: 541 SEETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFEHP-CVM 579


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 456 YRSMVGTDCYQIQRSKGGC 512
           Y +++ T CY+++    GC
Sbjct: 115 YFNLIDTKCYKLEHPVTGC 133


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 456 YRSMVGTDCYQIQRSKGGC 512
           Y +++ T CY+++    GC
Sbjct: 120 YFNLIDTKCYKLEHPVTGC 138


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +3

Query: 456 YRSMVGTDCYQIQRSKGGC 512
           Y +++ T CY+++    GC
Sbjct: 120 YFNLIDTKCYKLEHPVTGC 138


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 508 AVVLMDTQGTFDNSSTVRDSSTIFALSTLL 597
           A++L   Q T DN+ TVR+ +  + + T +
Sbjct: 24  ALLLGFVQSTPDNNKTVREFNVYWNVPTFM 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,624
Number of Sequences: 438
Number of extensions: 2777
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)