Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e04r
         (555 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    27   0.14 
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    27   0.14 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   2.4  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.2  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  

>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -2

Query: 485 VLTAIVAVSTNEVADPRSTDRANALSIGSITSSDRLLRSFV 363
           VL   VAV +   A  + T + + + +  I  SDRLL+++V
Sbjct: 5   VLVLFVAVLSVVFAADKYTTKYDNIDLNQILKSDRLLKNYV 45


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -2

Query: 485 VLTAIVAVSTNEVADPRSTDRANALSIGSITSSDRLLRSFV 363
           VL   VAV +   A  + T + + + +  I  SDRLL+++V
Sbjct: 5   VLVLFVAVVSVVFAADKYTTKYDNIDLNQILKSDRLLKNYV 45


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 109  FLFFCLHKKFVLPIFLINNSRIYYEASLSF 20
            F FF ++  FVL +FL+   + Y      F
Sbjct: 1270 FAFFMMNALFVLIVFLLTLKKDYLHIKWPF 1299


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 109  FLFFCLHKKFVLPIFLINNSRIYYEASLSF 20
            F FF ++  FVL +FL+   + Y      F
Sbjct: 1270 FAFFMMNALFVLIVFLLTLKKDYLHIKWPF 1299


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = -1

Query: 192 AAKSIFFTVQIWGR*NAYSGRLHANTRSFCFFVCTKNSFSPFF*LIIRVFITKLP-CLFF 16
           AA  IFF V +WG        L A+     F       F P +   + +F+ ++P C F 
Sbjct: 148 AASVIFFDVVVWG--------LSASDLGVFF-----KRFLPVYVSYLLIFVQQIPFCFFV 194

Query: 15  RTCKL 1
           R  +L
Sbjct: 195 RVIRL 199


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -2

Query: 110 VFVFLFAQKIRSPHFFN**FAYLL-RSFLVF 21
           VF+  FAQ + SP  FN  + Y    +F VF
Sbjct: 141 VFILFFAQGLTSP-IFNLVYVYCCDNNFNVF 170


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 133 TFTCKYTKFLFFCLHKKFVLPI 68
           +F   Y +FL+ C H   +L I
Sbjct: 136 SFIENYCQFLYNCFHSTLLLMI 157


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 109  FLFFCLHKKFVLPIFLI 59
            F FF  +  FVL +FL+
Sbjct: 1270 FAFFMFNALFVLVVFLL 1286


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 109  FLFFCLHKKFVLPIFLI 59
            F FF  +  FVL +FL+
Sbjct: 1270 FAFFMFNALFVLVVFLL 1286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,614
Number of Sequences: 336
Number of extensions: 2384
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)