Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e03f
         (546 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.0  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   5.3  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   9.3  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   9.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.3  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.3  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.3  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +2

Query: 278 NPENKQHN 301
           NP+NKQHN
Sbjct: 230 NPKNKQHN 237


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 164 DAAKSRVWNAHAAWTWFPARSSP 232
           D      ++ HA W  F A +SP
Sbjct: 195 DIINVMTYDFHAMWAGFTAENSP 217


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 294 NTTPPRFDPSFQPK*FVNPNLSCNYM 371
           N+    FD +FQ    V  N SC Y+
Sbjct: 94  NSADEGFDGTFQTNVVVKHNGSCLYV 119


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 294 NTTPPRFDPSFQPK*FVNPNLSCNYM 371
           N+    FD +FQ    V  N SC Y+
Sbjct: 94  NSADEGFDGTFQTNVVVKHNGSCLYV 119


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 276 TIRKISNTTPP 308
           TI+ +SNT PP
Sbjct: 265 TIQNVSNTIPP 275


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 11/37 (29%), Positives = 14/37 (37%)
 Frame = +2

Query: 215 PARSSPTTEHAT*RMLHASSYNPENKQHNPATFRSQF 325
           P  S  T E    R     S     +QH+PA   + F
Sbjct: 94  PLESLATVEETVVRDKAVESLRAVAQQHSPADLENHF 130


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 276 TIRKISNTTPP 308
           TI+ +SNT PP
Sbjct: 213 TIQNVSNTIPP 223


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 276 TIRKISNTTPP 308
           TI+ +SNT PP
Sbjct: 396 TIQNVSNTIPP 406


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,668
Number of Sequences: 336
Number of extensions: 2780
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)