Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11e02r
(681 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 24 1.3
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 24 1.3
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 24 1.3
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 23 2.3
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 23 2.3
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 23 2.3
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 22 5.3
AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax prot... 22 5.3
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 21 9.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.3
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 273 NTNLKLKKQYNAVKSDAEELRSAR 202
N +KLKK+ AVK E+ R R
Sbjct: 56 NRRMKLKKELRAVKEINEQARRER 79
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 273 NTNLKLKKQYNAVKSDAEELRSAR 202
N +KLKK+ AVK E+ R R
Sbjct: 207 NRRMKLKKELRAVKEINEQARRER 230
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 273 NTNLKLKKQYNAVKSDAEELRSAR 202
N +KLKK+ AVK E+ R R
Sbjct: 266 NRRMKLKKELRAVKEINEQARRER 289
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 336 PPDKRRWAMRYTWNPQNNPVLNTNLKL 256
PP + + PQ+NP++NT L
Sbjct: 57 PPSPQEVYYHHQTIPQDNPIINTETGL 83
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 336 PPDKRRWAMRYTWNPQNNPVLNTNLKL 256
PP + + PQ+NP++NT L
Sbjct: 57 PPSPQEVYYHHQTIPQDNPIINTETGL 83
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 336 PPDKRRWAMRYTWNPQNNPVLNTNLKL 256
PP + + PQ+NP++NT L
Sbjct: 57 PPSPQEVYYHHQTIPQDNPIINTETGL 83
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 273 NTNLKLKKQYNAVKSDAEELRSAR 202
N +KLKK+ A+K E+ + A+
Sbjct: 273 NRRMKLKKEIQAIKELNEQEKQAQ 296
>AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax
protein.
Length = 96
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -1
Query: 273 NTNLKLKKQYNAVKSDAEELRSAR 202
N +KLKK+ A+K E+ + A+
Sbjct: 55 NRRMKLKKEIQAIKELNEQEKQAQ 78
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 21.0 bits (42), Expect = 9.3
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = +1
Query: 298 PCVSHGPSSFIRWYVSSFYQSFPHEIIIHGL 390
P S PS WY +YQ + + H L
Sbjct: 25 PAYSPPPSYCDPWYNPYYYQYLQNAALYHKL 55
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 153 PIPLTFSLFYLNFSLIYEHFLILQHHSLLRCIVF*VS 263
PIP L + +L + I S+ +C++F VS
Sbjct: 277 PIPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVS 313
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 153 PIPLTFSLFYLNFSLIYEHFLILQHHSLLRCIVF*VS 263
PIP L + +L + I S+ +C++F VS
Sbjct: 277 PIPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVS 313
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 153 PIPLTFSLFYLNFSLIYEHFLILQHHSLLRCIVF*VS 263
PIP L + +L + I S+ +C++F VS
Sbjct: 277 PIPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVS 313
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +3
Query: 153 PIPLTFSLFYLNFSLIYEHFLILQHHSLLRCIVF*VS 263
PIP L + +L + I S+ +C++F VS
Sbjct: 277 PIPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVS 313
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,949
Number of Sequences: 336
Number of extensions: 2403
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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