Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11e01r
(683 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0540 - 34603979-34604094,34604173-34604290,34604394-346044... 113 9e-26
03_04_0111 + 17364496-17364612,17364741-17364915,17365847-173658... 110 9e-25
07_01_0606 + 4506331-4506645 33 0.21
02_04_0195 + 20830849-20830950,20831498-20831690,20831800-208319... 31 0.85
04_04_1695 + 35433975-35437040 30 1.5
03_02_0441 - 8517501-8517701,8518004-8518139,8519995-8520107,852... 30 2.0
06_03_0577 + 22461831-22462023,22462378-22463160,22463380-224649... 29 2.6
01_04_0124 + 16359695-16359734,16360217-16360453,16361133-163621... 29 2.6
09_04_0653 + 19242063-19242780,19244170-19244324,19245420-192456... 29 3.4
08_01_0684 + 6009474-6009582,6009715-6009904,6011412-6011483,601... 29 4.5
08_01_0683 + 5991905-5992055,5993262-5993451,5993701-5993772,599... 29 4.5
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 4.5
08_02_1253 - 25602258-25602640,25603305-25603767 28 6.0
05_03_0418 + 13700855-13700942,13701602-13701728,13701845-137019... 28 7.9
05_03_0175 + 9222749-9222819,9223045-9223116,9223426-9223497,922... 28 7.9
02_05_1219 + 35011571-35011897,35012008-35013780,35013915-350140... 28 7.9
01_04_0129 - 16449657-16449965 28 7.9
>03_06_0540 -
34603979-34604094,34604173-34604290,34604394-34604444,
34604829-34604891,34605312-34605364,34606084-34606258,
34606375-34606479
Length = 226
Score = 113 bits (273), Expect = 9e-26
Identities = 72/196 (36%), Positives = 111/196 (56%), Gaps = 5/196 (2%)
Frame = -3
Query: 666 KVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVC---EIEL 496
K++ VG N+ H +E P+ P +F K S+ + ++V + V E+EL
Sbjct: 14 KIVGVGRNFVAHAKELGNPVPKEPVLFLKPTSSFLHAG-VAGAAIEVPEPVESLHHEVEL 72
Query: 495 TVVIGKKASKVDSSHAFDYVLGYTIAQDIGATDWEKNKKISQL--LLGKAMDTFCPIGPW 322
VVI ++A V + A D+V GY +A D+ A + + K + L LGKA DTF PI
Sbjct: 73 AVVISQRARDVPEASAMDFVGGYALALDMTARELQSAAKSAGLPWTLGKAQDTFTPISAV 132
Query: 321 IVTSDEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGTP 142
I SD + NP +L + ++ +QK +T+ I KIP +I+ +S++MTL+ GD+ILTGTP
Sbjct: 133 IPKSD-VANPDDLELWLKVDDELRQKGSTSDMIFKIPSLISYISSIMTLMEGDVILTGTP 191
Query: 141 GGVGVYRNPPEFLQPG 94
GVG R P + ++ G
Sbjct: 192 EGVGPVR-PGQKIKAG 206
>03_04_0111 +
17364496-17364612,17364741-17364915,17365847-17365899,
17372593-17372655,17372794-17372844,17372949-17373066,
17373145-17373260
Length = 230
Score = 110 bits (265), Expect = 9e-25
Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 5/196 (2%)
Frame = -3
Query: 666 KVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPN---DTIKLKMDVSKAVVCEIEL 496
K++ VG NY H +E P+ P +F K S+ + I++ V +++ E+EL
Sbjct: 18 KIIGVGRNYVAHAKELGNPVPKEPLLFLKPTSSFLHAGVAGAAIEVPGPV-ESLHHEVEL 76
Query: 495 TVVIGKKASKVDSSHAFDYVLGYTIAQDIGATDWEKNKKISQL--LLGKAMDTFCPIGPW 322
VV+ ++A V + A D+V GY +A D+ A +++ K + L L KA DTF PI
Sbjct: 77 AVVLSQRARDVPEASAMDFVGGYALALDMTAREFQSAAKSAGLPWTLCKAQDTFTPISA- 135
Query: 321 IVTSDEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGTP 142
++ + NP +L + ++ +QK +T+ I KIP +I+ +S++MTL+ GD+ILTGTP
Sbjct: 136 VIPKSAVANPNDLELWLKVDDELRQKGSTSDMIFKIPSLISYISSIMTLMEGDVILTGTP 195
Query: 141 GGVGVYRNPPEFLQPG 94
GVG R P + ++ G
Sbjct: 196 EGVGPVR-PGQKIKAG 210
>07_01_0606 + 4506331-4506645
Length = 104
Score = 33.1 bits (72), Expect = 0.21
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2
Query: 538 KNGCK*SCGLRDRTDGCN 485
+ GC +CG+RDRTDGC+
Sbjct: 44 RGGCAHACGVRDRTDGCS 61
>02_04_0195 +
20830849-20830950,20831498-20831690,20831800-20831904,
20832147-20832235,20832316-20832468,20832628-20832762,
20832849-20833015,20833519-20833613,20833707-20834080,
20834177-20834599
Length = 611
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 546 IKLKMDVSKAVVCEIELTVVIGKKAS-KVDSSHAFDYVLGY 427
IK DV K +C IEL K+ S ++SS+ F++ +G+
Sbjct: 95 IKFGRDVDKGTICSIELDPDKAKQLSDAIESSYWFEFFIGF 135
>04_04_1695 + 35433975-35437040
Length = 1021
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/62 (25%), Positives = 35/62 (56%)
Frame = -3
Query: 633 HCEEQKLTPPELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVCEIELTVVIGKKASKVDSS 454
H E +++ P EL F+ FP++ P D ++++ D ++V ++ V+G A++ + +
Sbjct: 895 HAEAEQVHPDELDEEFDTFPTS--KPGDVVRMRYDRLRSVAGRVQ--TVVGDLATQGERA 950
Query: 453 HA 448
A
Sbjct: 951 QA 952
>03_02_0441 -
8517501-8517701,8518004-8518139,8519995-8520107,
8520189-8520284,8520376-8520590,8520675-8520797,
8520887-8520917,8521020-8521079,8521951-8522106,
8522185-8522274,8522347-8522562,8522671-8522805,
8522898-8523401,8523485-8523700,8524411-8524456,
8524542-8524678,8525059-8525191,8526084-8526358
Length = 960
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -3
Query: 606 PELPFIFNKFPSTVVGPNDTIKLKMDVSKAV 514
P +P + N F VV PN++ ++K V+KAV
Sbjct: 897 PLVPDVINAFAQVVVSPNESDEVKTVVAKAV 927
>06_03_0577 +
22461831-22462023,22462378-22463160,22463380-22464936,
22465082-22465449
Length = 966
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -3
Query: 234 NQFIHKIPDIIARLSNVMTLLPGDIILTGT-PGGVG 130
N+ IP+ I RLSN+M L G +LTG+ P +G
Sbjct: 333 NEVGGNIPEGIGRLSNLMALYMGPNLLTGSIPASLG 368
>01_04_0124 +
16359695-16359734,16360217-16360453,16361133-16362104,
16362211-16362398,16362564-16363942,16364024-16365047,
16365171-16365566,16367484-16367999,16368085-16368226,
16369409-16369553,16371351-16371432,16371851-16371895,
16372018-16372140
Length = 1762
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = -3
Query: 525 SKAVVCEIELTVVIGKKASKVDSSHAFDYVLGYTIAQDIGATDWEKNKK 379
S++ EI + +++ + S + SS FDYV Y A+ IGA E+ KK
Sbjct: 630 SRSAFVEIVIFLLVSIQ-SYIFSSGEFDYVSRYLEAEQIGAMVHEQEKK 677
>09_04_0653 +
19242063-19242780,19244170-19244324,19245420-19245609,
19245830-19245885
Length = 372
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = -3
Query: 201 ARLSNVMTLLPGDIILTGTPGGVGVYRNPPEFLQPGDVITSEIENIGTFETRVEEF 34
A+ +++ T P I T PG +G+ PP +Q +E ENI ET+ EEF
Sbjct: 158 AQPAHIGTAAPPPHIGTAQPGQIGIVTLPPAHIQN----NAENENIAGIETQ-EEF 208
>08_01_0684 +
6009474-6009582,6009715-6009904,6011412-6011483,
6011644-6011715,6011806-6011877,6012163-6012234,
6012283-6012354,6012479-6012550,6012634-6012705,
6013112-6013183,6013275-6013349,6013453-6013524,
6013619-6013684,6013752-6013777,6014179-6014558,
6014642-6014840,6014910-6015068,6015569-6015613,
6015742-6015973,6016053-6016203,6016306-6016665
Length = 879
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 246 KSNTNQFIHKIPDIIARLSNVMTLLPGDII 157
+++ N F IPD I LSN+ L GDI+
Sbjct: 245 RASDNNFTGTIPDFIGSLSNLEDLRIGDIV 274
>08_01_0683 +
5991905-5992055,5993262-5993451,5993701-5993772,
5994016-5994084,5994189-5994260,5994440-5994511,
5994623-5994694,5994777-5994848,5995276-5995347,
5995452-5995526,5995929-5996005,5996417-5996781,
5996872-5997070,5997151-5997309,5997391-5997509,
5997624-5997641,5997701-5997851,5997959-5998190,
5998272-5998422,5998517-5998876
Length = 915
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 234 NQFIHKIPDIIARLSNVMTLLPGDII 157
N F KIPD I L+N+ L GDI+
Sbjct: 238 NDFTGKIPDFIGSLTNLEDLRIGDIV 263
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 95 PG*RNSGGFLYTPTPPGVPVKMMSPG 172
P R GG PTPPG P M PG
Sbjct: 1187 PPPRGHGGVGGPPTPPGAPAPPMPPG 1212
>08_02_1253 - 25602258-25602640,25603305-25603767
Length = 281
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 440 MSSATQ*PRISALQTGRRTRKSVNCCWVKQWTPS 339
M ++ PR SAL TG R + C W+ P+
Sbjct: 9 MVASAMEPRSSALNTGDRAASTARCAWMSVSPPT 42
>05_03_0418 +
13700855-13700942,13701602-13701728,13701845-13701916,
13702079-13702153,13702290-13702361,13702477-13702638,
13702726-13702800,13702880-13702951,13703040-13703108,
13703196-13703264,13703355-13703429,13703522-13703593,
13703668-13703737,13703920-13704361,13704442-13704573,
13704664-13704803,13704910-13705129,13705301-13705536,
13705732-13706256
Length = 930
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = -3
Query: 240 NTNQFIHKIPDIIARLSNVMTLLPGDIILTG 148
N+NQF KIP + +LS V L D LTG
Sbjct: 148 NSNQFTGKIPPSLGKLSKVTWLDLADNQLTG 178
>05_03_0175 +
9222749-9222819,9223045-9223116,9223426-9223497,
9223609-9223680,9223765-9223836,9224408-9224482,
9224587-9224658,9224912-9224977,9225051-9225095,
9225220-9225724,9225807-9226005,9226080-9226238,
9226316-9226434,9226556-9226766,9226905-9227136,
9227219-9227369,9227458-9227781
Length = 838
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = -3
Query: 246 KSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGTPGGV 133
+++ N+F KIPD + L+N++ L+ + ++G G V
Sbjct: 97 RASDNEFTGKIPDYLGSLTNLIDLILRNCKVSGNLGPV 134
>02_05_1219 +
35011571-35011897,35012008-35013780,35013915-35014068,
35014158-35014801
Length = 965
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/67 (34%), Positives = 28/67 (41%)
Frame = +2
Query: 476 FFPITTVSSISQTTALLTSIFNLMVSFGPTTVLGNLLNIKGSSGGVNFCSSQ*SL*FNPT 655
F P T S Q T L S + T++G L G N C SL +PT
Sbjct: 301 FQPDTPPSETKQITILKPSD---SIKRNGNTLVGRQLYSDGDESEGNRCRRHQSLSVSPT 357
Query: 656 HSTLSFP 676
+STLS P
Sbjct: 358 NSTLSEP 364
>01_04_0129 - 16449657-16449965
Length = 102
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 615 LTPPELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVCEIE 499
+T P ++ K P GP I L+ D+ +AV C+ E
Sbjct: 1 MTVPHYTYMMMKMP----GPRGVISLRSDIKQAVTCDKE 35
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,032,728
Number of Sequences: 37544
Number of extensions: 453338
Number of successful extensions: 1263
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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