Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11e01r
(683 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13922| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_37341| Best HMM Match : FAA_hydrolase (HMM E-Value=3.3e-08) 64 1e-10
SB_48799| Best HMM Match : FAA_hydrolase (HMM E-Value=2.6) 59 4e-09
SB_39921| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_42832| Best HMM Match : ShTK (HMM E-Value=4.6e-07) 30 2.0
SB_46290| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33) 29 2.7
SB_51460| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33) 29 2.7
SB_46590| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_29424| Best HMM Match : 7tm_1 (HMM E-Value=9.99967e-42) 29 3.5
SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11) 29 3.5
SB_51094| Best HMM Match : VWA (HMM E-Value=0) 29 3.5
SB_13438| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24) 29 4.6
SB_10730| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24) 29 4.6
SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_4941| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_51914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_43399| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_24817| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30) 28 6.1
SB_13105| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_207| Best HMM Match : RVT_1 (HMM E-Value=7.4e-06) 28 6.1
SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21) 28 8.1
SB_6544| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_13922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 77.4 bits (182), Expect = 1e-14
Identities = 55/157 (35%), Positives = 83/157 (52%)
Frame = -3
Query: 507 EIELTVVIGKKASKVDSSHAFDYVLGYTIAQDIGATDWEKNKKISQLLLGKAMDTFCPIG 328
E+EL VVIG+K + ++ A D+V GY +A D+ TD + + + L K
Sbjct: 882 EVELGVVIGQKGANINEEAAMDHVGGYALALDM--TD----RTLQEELKKKGH------- 928
Query: 327 PWIVTSDEIGNPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTG 148
PW + NP NL + ++GV KQ+ T+ + +P +I+ +S +MTL GD+ILTG
Sbjct: 929 PWAI------NPHNLKLWLKVDGVTKQEGVTSDMMFTVPFLISYISKIMTLEEGDLILTG 982
Query: 147 TPGGVGVYRNPPEFLQPGDVITSEIENIGTFETRVEE 37
TP GV ++ GD IT+ IE I VE+
Sbjct: 983 TPAGVSA-------VKEGDNITAGIEGIVEMAFSVEK 1012
>SB_37341| Best HMM Match : FAA_hydrolase (HMM E-Value=3.3e-08)
Length = 223
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Frame = -3
Query: 483 GKKASKVD-------SSHAFDYVLGYTIAQDIGATDWEKNKKISQLLLGKAMDTFCPIGP 325
G K+ KVD A DYV GYT+A D+ A DW+ K Q LLGK D + P+GP
Sbjct: 154 GAKSEKVDLIFPGGGEEDAMDYVAGYTVAHDVSARDWQLKKNAGQWLLGKTGDAYLPLGP 213
Query: 324 WIVTSDEI 301
IVT D I
Sbjct: 214 AIVTKDAI 221
Score = 54.8 bits (126), Expect = 6e-08
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = -3
Query: 681 VHGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDTI 544
++ +K++C G+NY DHC EQ + P P IF+KF S + P D I
Sbjct: 24 IYNPEKIICTGMNYADHCYEQNMPIPTEPVIFSKFASAIAAPGDPI 69
>SB_48799| Best HMM Match : FAA_hydrolase (HMM E-Value=2.6)
Length = 77
Score = 58.8 bits (136), Expect = 4e-09
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = -3
Query: 249 QKSNTNQFIHKIPDIIARLSNVMTLLPGDIILTGTPGGVGVYRNPPEFLQPGDVITSEIE 70
Q NT I + +++ +S +TL PGDI+ TGTP GVG + P FL+ GDV+T I+
Sbjct: 2 QTGNTRTMIFDVKTLVSYVSEFITLEPGDILTTGTPPGVGEGKKPQVFLKAGDVMTLGIQ 61
Query: 69 NIG 61
+G
Sbjct: 62 KLG 64
>SB_39921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 478 LPDYNRQFYLADHSFTYIHF*LDGVVWSHHSTRKFVEY 591
L D N Q Y D F Y LDG +H++T+ ++Y
Sbjct: 119 LKDTNCQVYKNDGQFAYFRSPLDGCGTTHNTTKTHIKY 156
>SB_42832| Best HMM Match : ShTK (HMM E-Value=4.6e-07)
Length = 500
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -3
Query: 438 VLGYTIAQD-IGATDWEKNKKISQLLLGKAMDTFCPIGPWIV-TSDEIGNPQNLNVKCSI 265
V G T++Q + W K +K+ QL+ A P G W+ + + + ++ + C+I
Sbjct: 201 VPGVTVSQPKVRGWQWGKRRKLMQLVTSPARTRDFPGGRWVTDCATAVSSTISIPIPCAI 260
Query: 264 NG 259
G
Sbjct: 261 TG 262
>SB_46290| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33)
Length = 1019
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -3
Query: 618 KLTPPELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVCEIELTVVIGKKASKVDSSHAFD 442
K+T PE PF S V D + L + V ++ V++GK+ SK DS A+D
Sbjct: 443 KVTVPEKPFTRRGVLSIVNSVYDPLGLAVPVMLEGRTMLQKLVLMGKRRSKDDSPLAWD 501
>SB_51460| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33)
Length = 1584
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -3
Query: 618 KLTPPELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVCEIELTVVIGKKASKVDSSHAFD 442
K+T PE PF S V D + L + V ++ V++GK+ SK DS A+D
Sbjct: 835 KVTVPEKPFTRRGVLSIVNSVYDPLGLAVPVMLEGRTMLQKLVLMGKRRSKDDSPLAWD 893
>SB_46590| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 972
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 59 VPMFSISLVITS-PG*RNSGGFLYT-PTPPGVPVKMMSPGK 175
+PM+ ++ S PG G + Y PT PG+P + +SPG+
Sbjct: 592 IPMYGSTMAQASLPG--QPGQYQYVIPTQPGIPSQFLSPGQ 630
>SB_29424| Best HMM Match : 7tm_1 (HMM E-Value=9.99967e-42)
Length = 712
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -3
Query: 591 IFNKFPSTVVG-PNDTIKLKMDVSKAVVCEIELTVVIGKKAS 469
+ + STV+G N++ ++ V+ AV+C++ + VIG KA+
Sbjct: 533 VCREMDSTVIGGENNSNMIRKGVNGAVICKVANSYVIGGKAN 574
>SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11)
Length = 1170
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -3
Query: 618 KLTPPELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVCEIELTVVIGKKASKVDSSHAFD 442
K+T PE PF S V D + L + V ++ V++GK+ SK DS A+D
Sbjct: 668 KVTVPEKPFTRRGVLSIVNSVYDPLGLAVPVMLEGRKMLQKLVLMGKRTSKDDSPLAWD 726
>SB_51094| Best HMM Match : VWA (HMM E-Value=0)
Length = 3544
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 537 KMDVSKAVVCEIELTVVIGKKASKVDSSHAFDY--VLGYTIAQDIGATDWEKNKKI 376
K+ +++ + ++ +T++ S VDSS +DY G TI G W+ +KI
Sbjct: 1090 KLKLARKRLGDLGVTIITVALGSTVDSSKIYDYCPYRGNTIYSKDGGISWDMAEKI 1145
>SB_13438| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24)
Length = 672
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 202 NNIRDFVDKLVCITLLFLNAINAALYIQILRISDLIAGNYPRSNWAEGVHCFTQQQLTDF 381
+ +R V + +L +N + L +L + IA Y W G H + +L F
Sbjct: 53 HTVRSTESMWVTVNILVVNLSVSDLIFILLHLPRNIAHLYYAERWLPGTHGRSLCKLNHF 112
Query: 382 LVLLPVCSA 408
+V L CS+
Sbjct: 113 VVGLTFCSS 121
>SB_10730| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24)
Length = 654
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 202 NNIRDFVDKLVCITLLFLNAINAALYIQILRISDLIAGNYPRSNWAEGVHCFTQQQLTDF 381
+ +R V + +L +N + L +L + IA Y W G H + +L F
Sbjct: 38 HTVRSTESMWVTVNILVVNLSVSDLIFILLHLPRNIAHLYYAERWLPGTHGRSLCKLNHF 97
Query: 382 LVLLPVCSA 408
+V L CS+
Sbjct: 98 VVGLTFCSS 106
>SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2141
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 417 QDIGATDWEKNKKISQLLLGKAMDTFCPIG 328
Q I A DWE K +++LG++ T C +G
Sbjct: 1918 QKIYAMDWEPGAKRLRVMLGRSGKTVCTLG 1947
>SB_4941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 252 KQKSNTNQFIHKIPDIIARLSNVMTLLPGDII 157
KQK ++ D+I+R+S + ++PGD+I
Sbjct: 43 KQKQGIHELTDAFYDVISRMSASLPIVPGDLI 74
>SB_51914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 58 STNVLYFTRDHVTGLKKLWGVSVYTNTARSPGQNDVSWQKSHN 186
+TN + +H TG + G + TNT R ++D+ W ++ +
Sbjct: 2 ATNTTRDSHEHDTGWSRA-GHGMVTNTTRDGHEHDIGWSRTRH 43
>SB_43399| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 297 NPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSNVMTLLP 169
NP N + N +QK S+ N F +P ++ LSNVM+L P
Sbjct: 415 NPNNCVQVSTTNSIQKTPSSLNAF---VPALL--LSNVMSLAP 452
>SB_24817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 556
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 600 VLEASISALHSDLCNLIPRI-VLYHFHGP 683
VL ++ D C PRI ++YHFHGP
Sbjct: 127 VLAEYLNLTRVDYCPGTPRIPLIYHFHGP 155
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 28.3 bits (60), Expect = 6.1
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Frame = -3
Query: 681 VHGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVCEI 502
+ G + CV + +HCE L PP P + S V N+ ++L + ++ +V I
Sbjct: 2925 LEGGYRCTCVEGYFGEHCENGTLAPP--PSSAPRQASNDV--NNDVELGLSIAFVLVVLI 2980
Query: 501 ELTVVI----GKKASKVDSSHAFDYVLGYTIAQDIGATDWEKNKKISQLL 364
V++ KKA+K +S + Y + D++K K QLL
Sbjct: 2981 VALVILYFYFRKKAAK-ESGKYYPSEEEYKGGYPMSPLDFDKLDKEEQLL 3029
>SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30)
Length = 3015
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = -3
Query: 558 PNDTIKLKMDVSKAVVCEIELTVVIGKKASKVDSSHAFDYVLGYTIAQDI 409
P+ + + + A+ ++ VV+G + +D+ +FD +LG T +D+
Sbjct: 147 PDPITQRLLQIKAALPGVVQNVVVLGFRPGSIDALASFDVLLGKTTMKDV 196
>SB_13105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 68 FSISLVITSPG*RNSGGFLYTPTPPGVPV 154
F IS+ S G S FL+T PP VPV
Sbjct: 175 FKISISFHSEGAEKSLDFLFTSCPPDVPV 203
>SB_207| Best HMM Match : RVT_1 (HMM E-Value=7.4e-06)
Length = 773
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -3
Query: 297 NPQNLNVKCSINGVQKQKSNTNQFIHKIPDIIARLSNVMTLLP 169
NP N + N +QK S+ N F +P ++ LSNVM+L P
Sbjct: 126 NPNNCVQVSTTNSIQKTPSSLNAF---VPALL--LSNVMSLAP 163
>SB_15999| Best HMM Match : LRR_1 (HMM E-Value=1.7e-21)
Length = 791
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = -3
Query: 237 TNQFIHKIPDIIARLSNVMTLLPGDIILTGTPGGVGVYRNPPEFLQPGDVITSEIENIGT 58
TNQ I K+P+ I L N+ L+ + +L P G+G R L+ D+ +++E+I T
Sbjct: 734 TNQ-ISKLPEDIQWLVNLEVLILSNNLLKKLPRGIGALRK----LRVLDIEENKLESIPT 788
>SB_6544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 238 ITLLFLNAINAALYIQILRISDLIAGNYPRSN 333
I LL + +N ++ ++LR S I N+PR N
Sbjct: 263 IPLLVMVFLNGKIFYEVLRQSSKIKKNFPREN 294
>SB_5894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = -3
Query: 237 TNQFIHKIPDIIARLSNVMTLLPGDIILTGTPGGVGVYRNPPEFLQPGDVITSEIENIGT 58
TNQ I K+P+ I L N+ L+ + +L P G+G R L+ D+ +++E+I T
Sbjct: 309 TNQ-ISKLPEDIQWLVNLEVLILSNNLLKKLPRGIGALRK----LRVLDIEENKLESIPT 363
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,980,338
Number of Sequences: 59808
Number of extensions: 528656
Number of successful extensions: 1356
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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