Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e01f
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    26   0.21 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    26   0.21 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    26   0.21 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   3.5  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      21   6.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.1  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 240 ITLKAPVHGNDKVLCVGLNYKDHCEEQKLTPPELPFI 350
           I L  PV  +  +   G+ Y+D C   +  PP L F+
Sbjct: 166 INLSVPVLLSGLIAMCGMYYRDECSFAESIPPYLFFV 202


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 240 ITLKAPVHGNDKVLCVGLNYKDHCEEQKLTPPELPFI 350
           I L  PV  +  +   G+ Y+D C   +  PP L F+
Sbjct: 399 INLSVPVLLSGLIAMCGMYYRDECSFAESIPPYLFFV 435


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 240 ITLKAPVHGNDKVLCVGLNYKDHCEEQKLTPPELPFI 350
           I L  PV  +  +   G+ Y+D C   +  PP L F+
Sbjct: 399 INLSVPVLLSGLIAMCGMYYRDECSFAESIPPYLFFV 435


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +3

Query: 12  SATFEEVKTGNLKMKLLQFSYKNSDGIRAGFLDGDNVVD 128
           S T EE+  G     ++   + NSD ++    + DN  +
Sbjct: 346 SETCEEIVAGVTTYLVILIQFNNSDFVQRNSTEFDNATE 384


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 383 WSHHSTRKFVEYKRKFWRRQFLLFTVIFVI 294
           WS    R   E K   WR + ++ T++ V+
Sbjct: 2   WSLWKVRGRCEGKDSKWRGEHMVGTIVVVV 31


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 439 SISQTTALLTSIFN-LMVSFGPTTVLGNLLNIKGSSGG 329
           S SQ  A +  + + L +S    T +G L  IKG SGG
Sbjct: 186 SYSQRMARVEEVISDLALSKCQNTPIGILGRIKGISGG 223


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 439 SISQTTALLTSIFN-LMVSFGPTTVLGNLLNIKGSSGG 329
           S SQ  A +  + + L +S    T +G L  IKG SGG
Sbjct: 186 SYSQRMARVEEVISDLALSKCQNTPIGILGRIKGISGG 223


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 467 GFLPDYNRQFYLADHSFTYI 408
           G+  D N  F+L  HSF  +
Sbjct: 525 GYAYDANHPFHLHGHSFRVV 544


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,778
Number of Sequences: 336
Number of extensions: 3171
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)