BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11e01f
(606 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 1.8
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 2.3
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 23 2.3
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 3.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 4.1
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 4.1
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 4.1
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 4.1
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 4.1
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 4.1
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 4.1
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 5.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 5.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 5.4
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 5.4
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 9.4
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 9.4
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.4
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 21 9.4
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 282 CVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
C L Y + EQ P +P FPS +GP
Sbjct: 109 CKKLYYNINYIEQIPVPVPVPIYCGNFPSRPMGP 142
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 2.3
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 267 NDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
N+K L +NY EQ P +P + FP +GP
Sbjct: 322 NNKKLYYNINYI----EQIPVPVPVPIYYGNFPPRPMGP 356
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 23.0 bits (47), Expect = 2.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 41 KFKNETPTVFLQKQRWNPSGFLRWR 115
K K + P F + +W+ GFLR R
Sbjct: 142 KEKAKFPQEFFPECKWSRKGFLRTR 166
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +3
Query: 336 ELPFIFNKFPSTVVGPNDTIKLKMDVSKAVVCEIE 440
E+ + +KF S + N T+K + + C++E
Sbjct: 85 EIAALNHKFSSVTLYRNKTVKYSARMHAIIACQME 119
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 261 HGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
+ N K L +NY EQ P +P FPS +GP
Sbjct: 103 YNNYKKLYYNINYI----EQIPVPVPVPIYCGNFPSRPMGP 139
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 261 HGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
+ N K L +NY EQ P +P FPS +GP
Sbjct: 103 YNNYKKLYYNINYI----EQIPVPVPVPIYCGNFPSRPMGP 139
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 261 HGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
+ N K L +NY EQ P +P FPS +GP
Sbjct: 103 YNNYKKLYYNINYI----EQIPVPVPVPIYCGNFPSRPMGP 139
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 261 HGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
+ N K L +NY EQ P +P FPS +GP
Sbjct: 103 YNNYKKLYYNINYI----EQIPVPVPVPIYCGNFPSRPMGP 139
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 261 HGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
+ N K L +NY EQ P +P FPS +GP
Sbjct: 103 YNNYKKLYYNINYI----EQIPVPVPVPIYCGNFPSRPMGP 139
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 261 HGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
+ N K L +NY EQ P +P FPS +GP
Sbjct: 103 YNNYKKLYYNINYI----EQIPVPVPVPIYCGNFPSRPMGP 139
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 261 HGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
+ N K L +NY EQ P +P FPS +GP
Sbjct: 103 YNNYKKLYYNINYI----EQIPVPVPVPIYCGNFPSRPMGP 139
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +3
Query: 291 LNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
L YK++ + P +P + FP +GP
Sbjct: 115 LYYKNYIINIEQIPVPVPVYYGNFPPRPMGP 145
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +3
Query: 291 LNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
L+Y + EQ P P + FP +GP
Sbjct: 334 LHYNINYIEQIPVPVPFPVYYGNFPPRPMGP 364
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +3
Query: 291 LNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
L YK++ + P +P + FP +GP
Sbjct: 340 LYYKNYIINIEQIPVPVPVYYGNFPPRPMGP 370
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.8 bits (44), Expect = 5.4
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 373 WWDQTTPSS*KWM 411
WW++ P S KW+
Sbjct: 76 WWERYQPISYKWI 88
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/29 (27%), Positives = 14/29 (48%)
Frame = +3
Query: 297 YKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
YK++ + P +P + FP +GP
Sbjct: 117 YKNYIINIEQIPVPVPVYYGNFPPRPMGP 145
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/29 (27%), Positives = 14/29 (48%)
Frame = +3
Query: 297 YKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
YK++ + P +P + FP +GP
Sbjct: 117 YKNYIINIEQIPVPVPVYYGNFPPRPMGP 145
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.4
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +3
Query: 261 HGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
+ N K L +NY EQ P P + FP +GP
Sbjct: 95 NNNYKPLYYNINYI----EQIPVPVPFPVYYGNFPPRPMGP 131
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.4
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +3
Query: 261 HGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
+ N K L +NY EQ P P + FP +GP
Sbjct: 95 NNNYKPLYYNINYI----EQIPVPVPFPVYYGNFPPRPMGP 131
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.4
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +3
Query: 261 HGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
+ N K L +NY EQ P P + FP +GP
Sbjct: 95 NNNYKPLYYNINYI----EQIPVPVPFPVYYGNFPPRPMGP 131
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.4
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +3
Query: 261 HGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
+ N K L +NY EQ P P + FP +GP
Sbjct: 95 NNNYKPLYYNINYI----EQIPVPVPFPVYYGNFPPRPMGP 131
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.4
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +3
Query: 261 HGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
+ N K L +NY EQ P P + FP +GP
Sbjct: 328 NNNYKPLYYNINYI----EQIPVPVPFPVYYGNFPPRPMGP 364
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.4
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +3
Query: 261 HGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
+ N K L +NY EQ P P + FP +GP
Sbjct: 328 NNNYKPLYYNINYI----EQIPVPVPFPVYYGNFPPRPMGP 364
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.4
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +3
Query: 261 HGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
+ N K L +NY EQ P P + FP +GP
Sbjct: 328 NNNYKPLYYNINYI----EQIPVPVPFPVYYGNFPPRPMGP 364
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 9.4
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +3
Query: 261 HGNDKVLCVGLNYKDHCEEQKLTPPELPFIFNKFPSTVVGP 383
+ N K L +NY EQ P P + FP +GP
Sbjct: 317 NNNYKPLYYNINYI----EQIPVPVPFPVYYGNFPPRPMGP 353
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 226 TGDLALIFFTLEMEFVLRSSINVDGN 149
T D++L+F M +R+SINV G+
Sbjct: 460 TNDISLLFAVDWMLDRIRTSINVLGD 485
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,946
Number of Sequences: 438
Number of extensions: 3902
Number of successful extensions: 29
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -