Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11d22f
         (586 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep: ...    56   5e-07
UniRef50_Q8MLS3 Cluster: CG30413-PA; n=1; Drosophila melanogaste...    40   0.043
UniRef50_UPI00015B5015 Cluster: PREDICTED: hypothetical protein;...    37   0.30 
UniRef50_Q4V4H7 Cluster: IP04046p; n=4; Sophophora|Rep: IP04046p...    37   0.40 
UniRef50_Q2PE22 Cluster: CG34026-PA; n=1; Drosophila melanogaste...    35   1.6  
UniRef50_Q178T1 Cluster: Putative uncharacterized protein; n=1; ...    35   1.6  
UniRef50_A0GBT2 Cluster: Putative anti-sigma regulatory factor, ...    34   2.8  
UniRef50_Q72A96 Cluster: Putative uncharacterized protein; n=2; ...    33   3.8  
UniRef50_A3SCQ6 Cluster: Putative uncharacterized protein; n=2; ...    33   6.6  
UniRef50_A5K036 Cluster: Putative uncharacterized protein; n=1; ...    33   6.6  
UniRef50_Q1WFH9 Cluster: ACP225; n=10; melanogaster subgroup|Rep...    32   8.7  
UniRef50_Q17IR0 Cluster: Putative uncharacterized protein; n=2; ...    32   8.7  
UniRef50_A2G5S6 Cluster: Putative uncharacterized protein; n=1; ...    32   8.7  

>UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep:
           HMG176 - Helicoverpa armigera (Cotton bollworm)
           (Heliothis armigera)
          Length = 176

 Score = 56.4 bits (130), Expect = 5e-07
 Identities = 30/93 (32%), Positives = 48/93 (51%)
 Frame = +2

Query: 119 RSTLNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSI 298
           RS ++LG IG  DRLL +    R + +++    + +     + I  +  R  G+ Q  + 
Sbjct: 73  RSGMSLGNIGASDRLLSASTHSR-NPIANQVQTVNVRYTGSSSIIILAVRAYGSGQGATA 131

Query: 299 RLTHGGLGSTFAAFDITNAAGRGLNYRVEIWGR 397
           R+  G LG       + +A GRG +YR+EIWGR
Sbjct: 132 RVVEGYLGRNSITIQLQSARGRGFHYRIEIWGR 164


>UniRef50_Q8MLS3 Cluster: CG30413-PA; n=1; Drosophila
           melanogaster|Rep: CG30413-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 122

 Score = 39.9 bits (89), Expect = 0.043
 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
 Frame = +2

Query: 101 DFDSFRRSTLNLGVIGNQDRLLRSENFVRA-SMVSSWAHPLTLF-APTGTRINAIRAREV 274
           +F S   +    G     D L+ SE   ++ S++       TL  A T   I  I+  ++
Sbjct: 21  NFGSGEGNDYTYGTQATTDTLIASETITKSKSLLGITTKTYTLTQAGTAKTITYIKITDL 80

Query: 275 GASQSGSIRLTHGGLGSTFAAFDITNAAGRGLNYRVEIWG 394
              +  +  +T GG+GST      T+A G G+  +V I+G
Sbjct: 81  KKMRGATAEITSGGVGSTTVTIKFTSARGAGIKSQVVIYG 120


>UniRef50_UPI00015B5015 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 136

 Score = 37.1 bits (82), Expect = 0.30
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
 Frame = +2

Query: 140 VIGNQ---DRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRL-T 307
           +IGN+   DRL+  EN V+ S           F  TG  I  IRA +   + +G+I    
Sbjct: 43  IIGNRQAGDRLVYQENIVKPSKWLQVIEVKKSFNITGYLITQIRAMDQKTNGNGAIASRV 102

Query: 308 HGGLGSTFAAFDITNAAGRGLNYRVEIWGR 397
            GG+G +       +    G+N+ V+I+ R
Sbjct: 103 DGGVGYSNVTLKFKSQRSHGINFVVQIYAR 132


>UniRef50_Q4V4H7 Cluster: IP04046p; n=4; Sophophora|Rep: IP04046p -
           Drosophila melanogaster (Fruit fly)
          Length = 112

 Score = 36.7 bits (81), Expect = 0.40
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
 Frame = +2

Query: 149 NQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSG-SIRLTHGGLGS 325
           N D LL     VR  + +++ +    +      I+A+   +   + SG S  L  GG G 
Sbjct: 29  NNDYLLSRTTEVRNPIKNNYWNVNVNYPAGFYNISAVIVYDNFKNNSGASPSLYSGGPGY 88

Query: 326 TFAAFDITNAAGRGLNYRVEIWGR 397
            FA  ++     RG+N  VEIWGR
Sbjct: 89  RFATVNLRGQVNRGINSTVEIWGR 112


>UniRef50_Q2PE22 Cluster: CG34026-PA; n=1; Drosophila
           melanogaster|Rep: CG34026-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 117

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +2

Query: 248 INAIRAREVGASQSGSIRLTHGGLGSTFAAFDITNAAGRGLNYRVEIWGR 397
           I AI+  +   S   +  L  GG GS  A    T+  G G+   VEIWGR
Sbjct: 68  ITAIKITDKKKSHGATAVLVSGGPGSKGATIKFTSERGYGIKDIVEIWGR 117


>UniRef50_Q178T1 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 195

 Score = 34.7 bits (76), Expect = 1.6
 Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
 Frame = +2

Query: 128 LNLGVIGNQDRLLRSENFV-RASMVSSWAHPLTLFAPTGTRINAIRAREVGASQSGSIRL 304
           L  G     D L+  +N V   S  S+    L ++      I  +RA +      G++  
Sbjct: 85  LEFGNCSESDELIYFDNTVIENSGPSTLNGTLEIYIDAPVNITCVRAIDQIKDGFGAVP- 143

Query: 305 THGGLGSTFAAFDITNAAGRGLNYRVEIWG 394
           T+  +GS +A  D++   GRG ++ + ++G
Sbjct: 144 TYNSMGSNWAKIDVSGQYGRGFHFHIYVYG 173


>UniRef50_A0GBT2 Cluster: Putative anti-sigma regulatory factor,
           serine/threonine protein kinase; n=4; Bacteria|Rep:
           Putative anti-sigma regulatory factor, serine/threonine
           protein kinase - Burkholderia phytofirmans PsJN
          Length = 155

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +2

Query: 224 LFAPTGTRINAI-RAREVGASQSGSIRLTHGGLGSTFAAFDITNAAGRGLNYRVEIWGR 397
           +F  TG  I  I RA E G S + S+ L  GG     + F+IT+ AG+G    +  W R
Sbjct: 96  VFEDTGPGIPDISRALEDGFSTAKSMGLGLGGARRLVSEFEITSTAGQGTRVSITQWKR 154


>UniRef50_Q72A96 Cluster: Putative uncharacterized protein; n=2;
            Desulfovibrio vulgaris subsp. vulgaris|Rep: Putative
            uncharacterized protein - Desulfovibrio vulgaris (strain
            Hildenborough / ATCC 29579 / NCIMB8303)
          Length = 1783

 Score = 33.5 bits (73), Expect = 3.8
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = -2

Query: 282  DAPTSLARMALMRVPVGANKVNG*AHDDTIEARTKFSLR 166
            D P SLAR+ +  VPV A +V+G A   T+E RT+ + R
Sbjct: 1137 DVPVSLARLVVDTVPV-AGEVSGEARVSTVEGRTEGAFR 1174


>UniRef50_A3SCQ6 Cluster: Putative uncharacterized protein; n=2;
           Sulfitobacter|Rep: Putative uncharacterized protein -
           Sulfitobacter sp. EE-36
          Length = 328

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = -2

Query: 366 PLPAAFVMSKAAKVEPSPP*VSLIEPDCDAPTSLARMALMRVPVGANKV 220
           P P A   S++A+V P P  +   +PD DAP  L+R  + + P  A K+
Sbjct: 126 PAPLAVPPSESAQVAPPPETLQAQDPDSDAPV-LSRRPMRKNPETAAKI 173


>UniRef50_A5K036 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 1452

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = -1

Query: 502  LTVRSL*INLDFVWLNCTHELRPKCYCYFLYIVFLTSPNFHPVVQSPAGCVRNVKSGKGG 323
            + + +L IN   +++N +++LR     YF  ++ L     H  + SP G    +  G+GG
Sbjct: 1212 IMLNTLRINNTNLFINLSYDLRKNNLDYFYLLLLLNFYGLHDSLISPGGVEDPLSGGEGG 1271

Query: 322  TE 317
             E
Sbjct: 1272 EE 1273


>UniRef50_Q1WFH9 Cluster: ACP225; n=10; melanogaster subgroup|Rep:
           ACP225 - Drosophila yakuba (Fruit fly)
          Length = 121

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
 Frame = +2

Query: 125 TLNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGT-RINAIRAREVGASQSGSIR 301
           T   GV+    +L+  E  V A            F P    +++AI   +   S+ G+  
Sbjct: 28  TTTFGVLKPGAKLIHKEEIVEAKKFLRVVTRKVHFKPQQPYKLSAIVITDHSESKGGTAS 87

Query: 302 LTHGGLGSTFAAFDITNAAGRGLNYRVEIW 391
           L  GG    FA     +    GLN+ +EI+
Sbjct: 88  LLEGGPPGKFAVIGFRSDRNHGLNFTLEIY 117


>UniRef50_Q17IR0 Cluster: Putative uncharacterized protein; n=2;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 118

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
 Frame = +2

Query: 155 DRLLRSENFVRASM-VSSWAHPLTLFAPTGT----RINAIRARE-VGASQSGSIRLTHGG 316
           DRLL+S   V  S+ V           P G+     +  I AR+ V     G   L  GG
Sbjct: 32  DRLLQSATIVNNSLPVPIKTAVFQYLPPQGSARAPNVTYILARDNVRNGLGGFAALISGG 91

Query: 317 LGSTFAAFDITNAAGRGLNYRVEIWGR 397
           +  T A   +++    G N+ +E++GR
Sbjct: 92  INQTHATVKLSSRPNLGFNFTIEVYGR 118


>UniRef50_A2G5S6 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 824

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = -1

Query: 391 PNFHPVVQSPAGCVRNVKSGKGGTESAVSKPDRTGL*C---PNFSSAYGVDASTGRRKQS 221
           P F PV+ SP G   N KS   G+E  +S P   G      P F S     AS    KQS
Sbjct: 240 PGFEPVLSSPPG-FENTKSNSSGSEPILSDPPGFGKVIDAPPGFESVINTPASK-ESKQS 297

Query: 220 Q 218
           +
Sbjct: 298 E 298


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,546,524
Number of Sequences: 1657284
Number of extensions: 10772160
Number of successful extensions: 22302
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 21763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22297
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)