Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11d20r
         (557 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.4  
AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.    21   5.4  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   5.4  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   5.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   9.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.5  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   9.5  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 348 VPFEATSHALLSGVN*FATFRALRVISGFERHCARLTYPVRRVG 479
           V F  T  ALL G   + T   L +I+    +CA      R VG
Sbjct: 141 VVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCRAVG 184


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 348 VPFEATSHALLSGVN*FATFRALRVISGFERHCARLTYPVRRVG 479
           V F  T  ALL G   + T   L +I+    +CA      R VG
Sbjct: 141 VVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCRAVG 184


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = +3

Query: 348 VPFEATSHALLSGVN*FATFRALRVISGFERHCARLTYPVRRVG 479
           V F  T  ALL G   + T   L +I+    +CA      R VG
Sbjct: 141 VVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCRAVG 184


>AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.
          Length = 46

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 549 ELRAQQSRHHRPELYTRPGARLSFRLDE 466
           EL    SR H P+++TR    +   L E
Sbjct: 11  ELEKAFSRTHYPDVFTREELAMKIGLTE 38


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 552 FELRAQQSRHHRPELYTRPGA 490
           FE+   ++R H PE+    GA
Sbjct: 62  FEVSLSENRSHEPEMERPKGA 82


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 552 FELRAQQSRHHRPELYTRPGA 490
           FE+   ++R H PE+    GA
Sbjct: 82  FEVSLSENRSHEPEMERPKGA 102


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 243 EFACMAHFAVQFTLVL*AVG*VQQFL 320
           EF     FA+ +TLV   +G V  ++
Sbjct: 621 EFNAAGFFAINYTLVFSILGGVTTYI 646


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 243 EFACMAHFAVQFTLVL*AVG*VQQFL 320
           EF     FA+ +TLV   +G V  ++
Sbjct: 346 EFNAAGFFAINYTLVFSILGGVTTYI 371


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 341 CFKCGLCQKLLDSTNCSEHEGEL 273
           C   G C  L++S +CS   G L
Sbjct: 231 CQNGGTCHDLVNSFSCSCPSGTL 253


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 525 HHRPELYTRPGARLSFRLDEQDKLSEHN 442
           HH P++Y  P      R   ++ L  HN
Sbjct: 94  HHNPQVYPDPEKFDPDRFLPENCLKRHN 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,483
Number of Sequences: 336
Number of extensions: 2238
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)