Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11d16r
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    25   0.59 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   9.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.6  

>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 74  NGYLMPVFTRNIPDPCFTSL 133
           N  ++ V+TRNIPD   TSL
Sbjct: 53  NCLVLNVYTRNIPDGIHTSL 72


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 603 QPSLPLNMLIN*MMTNPQR*RYNRHLL 683
           +P  P N++IN  + +  +  YN HL+
Sbjct: 267 RPDPPQNLVINESIIDLSQQTYNVHLM 293


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 287 RAARITYVATTALMKFLLQQLRMANI 210
           ++AR+ Y   T L  FL+   +M  I
Sbjct: 51  KSARVVYALFTLLGTFLISGFQMQKI 76


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 287 RAARITYVATTALMKFLLQQLRMANI 210
           ++AR+ Y   T L  FL+   +M  I
Sbjct: 51  KSARVVYALFTLLGTFLISGFQMQKI 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,840
Number of Sequences: 336
Number of extensions: 3727
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)