Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d16r
(696 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 110 9e-25
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-20
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 88 7e-18
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 60 2e-09
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 52 4e-07
SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38) 29 0.54
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_2178| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043) 29 4.8
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 110 bits (265), Expect = 9e-25
Identities = 72/197 (36%), Positives = 102/197 (51%), Gaps = 19/197 (9%)
Frame = -1
Query: 696 KDAFLTSGDYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKNLK----LPLNKVHIV 529
K+ L GD+NVI+VDW + ++ AV VG+ A L+ L+ L VH++
Sbjct: 135 KNELLWEGDFNVIIVDWMRGAWFPFTRAVANTRLVGAQTARLLQILEERSGRKLAYVHVI 194
Query: 528 GFNLGAHVAGVTGRNLEGK---VARITGLDPSARDW---ENNVLRLGTNDAQYVEVIHTD 367
GF+ GAHVAG GR ++ + + RIT LDP+A W + +RL T+DA +V+VIHT
Sbjct: 195 GFSFGAHVAGYVGRRMKKRGRMIDRITALDPAAM-WFHKHHEDVRLDTSDALFVDVIHTS 253
Query: 366 GSGVNKNGLGVAIGHIDFFVNGRLVQPGCTN--------NLCSHNRAYEVFAATI-THGK 214
G+ IGH DF+ NG QPGC N C H RA +F ++ T
Sbjct: 254 AD----YGITSTIGHADFYPNGGKKQPGCDNFFRGFSSYLFCGHKRAPALFTTSLYTKTP 309
Query: 213 HYGNQCSTEAEITANNC 163
Y C +E + + NC
Sbjct: 310 LYSYPCRSEDDFNSGNC 326
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 96.3 bits (229), Expect = 2e-20
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 17/175 (9%)
Frame = -1
Query: 696 KDAFLTSGDYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKNLKLPLNKV----HIV 529
+ A + D NVI DWS + Y A VG+ I +K L ++V
Sbjct: 633 RHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPASFYLV 692
Query: 528 GFNLGAHVAGVTGRNLEG---KVARITGLDPSARDWEN-NV-LRLGTNDAQYVEVIHTDG 364
GF+LGAH++G GR + K+ RITGLDP++ + N +V +RL +DA +V+V+HTD
Sbjct: 693 GFSLGAHISGYVGRRIAKTGQKLNRITGLDPASIHFVNAHVDVRLDPSDADFVDVMHTD- 751
Query: 363 SGVNKNGLGVAIGHIDFFVNGRLVQPGCTNNL--------CSHNRAYEVFAATIT 223
++ G GHIDF+ NG QPGC + L C H RA E +A ++T
Sbjct: 752 --MDLAGTPTVSGHIDFYPNGGKKQPGCRDLLDGPINYVICDHMRAPEYYAESVT 804
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 87.8 bits (208), Expect = 7e-18
Identities = 58/150 (38%), Positives = 83/150 (55%), Gaps = 10/150 (6%)
Frame = -1
Query: 696 KDAFLTSGDYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKN-LKLPLNK----VHI 532
KD L D NVI+VDW + Y AV VG+ +A F+K L L ++ H
Sbjct: 116 KDELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFHS 175
Query: 531 VGFNLGAHVAGVTGRNLE--GK-VARITGLDPSARDWENNV--LRLGTNDAQYVEVIHTD 367
+GF+LGAH++G G+ L+ G+ + RITGLDP+ ++ +RL DAQ+V+VIHT
Sbjct: 176 IGFSLGAHISGYVGQRLKRIGRHLDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHTS 235
Query: 366 GSGVNKNGLGVAIGHIDFFVNGRLVQPGCT 277
G+ GH+DF+ NG Q GC+
Sbjct: 236 ----YVFGITAPHGHMDFYPNGGTSQRGCS 261
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = -1
Query: 696 KDAFLTSGDYNVIVVDWSSFS--LSTYSTAVMAVTGVGSSIATFLKNLK----LPLNKVH 535
+D L NVI VDW S + L+ Y A VG+ +A + ++ L +VH
Sbjct: 45 RDELLKREPMNVITVDWQSGADGLNLYHVAAGNTRVVGAQLAELITTIQRVFDFDLRRVH 104
Query: 534 IVGFNLGAHVAGVTGRNLEGKVARIT 457
++G +LGAHVAG G L GKV RIT
Sbjct: 105 LIGHSLGAHVAGYAGERLSGKVGRIT 130
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 52.0 bits (119), Expect = 4e-07
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Frame = -1
Query: 453 LDPSARDWENNVL--RLGTNDAQYVEVIHTDGSGVNKNGLGVAIGHIDFFVNGRLVQPGC 280
LDP+ + N + RL +DA++V+V+HTD ++ G GHIDF+ NG QPGC
Sbjct: 2 LDPAGLYFVNEHVDVRLDPSDAEFVDVMHTD---MDFAGTSTQSGHIDFYPNGGKNQPGC 58
Query: 279 -------TNNL-CSHNRAYEVFAATIT 223
+N L C H RA++ F +IT
Sbjct: 59 RDIADGPSNALKCDHVRAHDYFTESIT 85
>SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38)
Length = 450
Score = 29.5 bits (63), Expect(2) = 0.54
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 284 PGWTRRPLTKKSMC-PIATPKPFLLTPDPSV*ITSTY*ASFVPSRSTLFSQSRAEGSRP 457
P +P+ +C P+ +P P +++P P I + + VP+ TL QS A P
Sbjct: 193 PSPASQPVAPSPVCIPVQSPAPNMMSPSPQQFIAQSPAPTSVPTPGTLNVQSPASILNP 251
Score = 21.0 bits (42), Expect(2) = 0.54
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +2
Query: 578 AILDPTPVTAITAVEYVDKLN 640
++ P P++A Y++KLN
Sbjct: 257 SVTSPAPLSAAEEQAYLEKLN 277
>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = -1
Query: 534 IVGFNLGAHVAGVTG---RNLEG-KVARITG 454
++GF+LG HVAG G +N G K+ RI+G
Sbjct: 21 VIGFSLGGHVAGYAGSRIKNTTGLKLGRISG 51
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = -1
Query: 417 LRLGTNDAQYVEVIHTDGSGVNKNGLGVAI-GHID-FFVNGRLVQPGCTNNLCSHNRAYE 244
+ + +++ ++ + SG + + HID +NG +V PG + Y
Sbjct: 1 MSMSSDEVNFLVYRYLQESGFQHSAFTFGVESHIDQSSINGSVVPPGALVTILQKGVQYV 60
Query: 243 VFAATITHGKHYGNQCSTEAEITANN-CRG 157
AT+T G Y EAE T CRG
Sbjct: 61 EAEATVTEGVQY-----VEAEATVTEVCRG 85
>SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -1
Query: 582 IATFLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPS 442
+ +FL + + K H+ G ++G H+ GV +VA + + P+
Sbjct: 120 LLSFLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPA 166
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -1
Query: 318 DFFVNGRLVQPGCTNNLCSHNRAYEVFAATITHGKHYGNQCSTEA 184
D++ ++ G T+ C YE T GK YGN+C A
Sbjct: 1278 DYYAQCQVEDDGSTSCKCPIFCTYEYMPVCGTDGKTYGNKCEMRA 1322
>SB_2178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 696 KDAFLTSGDYNVIVVDWSSFSLSTYSTAV 610
K+ L GD+NVI+VDW + ++ AV
Sbjct: 20 KNELLWEGDFNVIIVDWMRGAWFPFTRAV 48
>SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -1
Query: 351 KNGLGVAIG---HIDFFVNGRLVQPGCTNNLCSHNRA 250
K+ G+ IG H+D VNG VQ C+HN+A
Sbjct: 12 KSSEGMYIGADLHLDKDVNGAYVQGSFIGGFCTHNKA 48
>SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043)
Length = 183
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -1
Query: 573 FLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPS 442
FL + + K H+ G ++G H+ GV +VA + + P+
Sbjct: 1 FLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPA 44
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,888,283
Number of Sequences: 59808
Number of extensions: 470337
Number of successful extensions: 1111
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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