Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d14f
(606 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g17390.1 68416.m02222 S-adenosylmethionine synthetase, putati... 210 4e-55
At2g36880.1 68415.m04521 S-adenosylmethionine synthetase, putati... 205 2e-53
At1g02500.2 68414.m00201 S-adenosylmethionine synthetase 1 (SAM1... 205 2e-53
At1g02500.1 68414.m00200 S-adenosylmethionine synthetase 1 (SAM1... 205 2e-53
At4g01850.1 68417.m00242 S-adenosylmethionine synthetase 2 (SAM2... 204 3e-53
At3g46800.1 68416.m05080 DC1 domain-containing protein contains ... 28 4.2
At2g03270.1 68415.m00280 DNA-binding protein, putative similar t... 28 4.2
At3g43300.1 68416.m04570 guanine nucleotide exchange family prot... 28 5.5
At1g54960.1 68414.m06277 NPK1-related protein kinase, putative (... 28 5.5
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 27 7.3
At1g05055.1 68414.m00506 basic transcription factor 2, 44kD subu... 27 7.3
At5g50100.1 68418.m06204 expressed protein contains Pfam domain ... 27 9.6
At4g38660.1 68417.m05473 thaumatin, putative similar to thaumati... 27 9.6
>At3g17390.1 68416.m02222 S-adenosylmethionine synthetase, putative
similar to S-adenosylmethionine synthetase 2 (Methionine
adenosyltransferase 2, AdoMet synthetase 2)
[Catharanthus roseus] SWISS-PROT:Q96552
Length = 393
Score = 210 bits (514), Expect = 4e-55
Identities = 100/155 (64%), Positives = 123/155 (79%), Gaps = 2/155 (1%)
Frame = +2
Query: 146 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 325
FLFTSESV EGHPDK+CDQISDAILDA L QDP++KVACET TKT MV++ GEIT+KANV
Sbjct: 4 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANV 63
Query: 326 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQ 499
DY+++VR+T + IG+ + G D C V++ ++QQSP+IA GVH + + EEVGAGDQ
Sbjct: 64 DYEQIVRKTCREIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEVGAGDQ 123
Query: 500 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRN 604
G MFGYATDET E MPLT VLA KL K+ E+R+N
Sbjct: 124 GHMFGYATDETPELMPLTHVLATKLGAKLTEVRKN 158
>At2g36880.1 68415.m04521 S-adenosylmethionine synthetase, putative
similar to S-adenosylmethionine synthetase 3 (Methionine
adenosyltransferase 3, AdoMet synthetase 3)
[Lycopersicon esculentum] SWISS-PROT:P43282
Length = 390
Score = 205 bits (501), Expect = 2e-53
Identities = 97/155 (62%), Positives = 121/155 (78%), Gaps = 2/155 (1%)
Frame = +2
Query: 146 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 325
FLFTSESV EGHPDK+CDQISDAILDA L QDP++KVACET TKT MV++ GEIT+ A V
Sbjct: 4 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTAAKV 63
Query: 326 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQ 499
DY+K+VR T + IG+ + G D C+V++ ++QQSP+IA GVH + + E++GAGDQ
Sbjct: 64 DYEKIVRSTCREIGFISADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEDIGAGDQ 123
Query: 500 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRN 604
G MFGYATDET E MPLT VLA KL K+ E+R+N
Sbjct: 124 GHMFGYATDETPELMPLTHVLATKLGAKLTEVRKN 158
>At1g02500.2 68414.m00201 S-adenosylmethionine synthetase 1 (SAM1)
identical to S-adenosylmethionine synthetase 1
(Methionine adenosyltransferase 1, AdoMet synthetase 1)
[Arabidopsis thaliana] SWISS-PROT:P23686
Length = 393
Score = 205 bits (501), Expect = 2e-53
Identities = 97/155 (62%), Positives = 121/155 (78%), Gaps = 2/155 (1%)
Frame = +2
Query: 146 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 325
FLFTSESV EGHPDK+CDQISDA+LDA L QDPD+KVACET TKT MV++ GEIT+KA V
Sbjct: 4 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATV 63
Query: 326 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQ 499
DY+K+VR+T + IG+ G D C V++ ++QQSP+IA GVH + + EE+GAGDQ
Sbjct: 64 DYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKCPEEIGAGDQ 123
Query: 500 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRN 604
G MFGYATDET E MPL+ VLA KL ++ E+R+N
Sbjct: 124 GHMFGYATDETPELMPLSHVLATKLGARLTEVRKN 158
>At1g02500.1 68414.m00200 S-adenosylmethionine synthetase 1 (SAM1)
identical to S-adenosylmethionine synthetase 1
(Methionine adenosyltransferase 1, AdoMet synthetase 1)
[Arabidopsis thaliana] SWISS-PROT:P23686
Length = 393
Score = 205 bits (501), Expect = 2e-53
Identities = 97/155 (62%), Positives = 121/155 (78%), Gaps = 2/155 (1%)
Frame = +2
Query: 146 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 325
FLFTSESV EGHPDK+CDQISDA+LDA L QDPD+KVACET TKT MV++ GEIT+KA V
Sbjct: 4 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATV 63
Query: 326 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQ 499
DY+K+VR+T + IG+ G D C V++ ++QQSP+IA GVH + + EE+GAGDQ
Sbjct: 64 DYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKCPEEIGAGDQ 123
Query: 500 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRN 604
G MFGYATDET E MPL+ VLA KL ++ E+R+N
Sbjct: 124 GHMFGYATDETPELMPLSHVLATKLGARLTEVRKN 158
>At4g01850.1 68417.m00242 S-adenosylmethionine synthetase 2 (SAM2)
identical to S-adenosylmethionine synthetase 2
(Methionine adenosyltransferase 2, AdoMet synthetase 2)
[Arabidopsis thaliana] SWISS-PROT:P17562
Length = 393
Score = 204 bits (499), Expect = 3e-53
Identities = 94/155 (60%), Positives = 121/155 (78%), Gaps = 2/155 (1%)
Frame = +2
Query: 146 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 325
FLFTSESV EGHPDK+CDQISDA+LDA L QDPD+KVACET TKT MV++ GEIT+KA +
Sbjct: 4 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATI 63
Query: 326 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHEN--RNDEEVGAGDQ 499
DY+K+VR+T + IG+ G D C V++ ++QQSP+IA GVH + + E++GAGDQ
Sbjct: 64 DYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQ 123
Query: 500 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRN 604
G MFGYATDET E MPL+ VLA K+ ++ E+R+N
Sbjct: 124 GHMFGYATDETPELMPLSHVLATKIGARLTEVRKN 158
>At3g46800.1 68416.m05080 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 682
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 598 PELCNFLIEFVCKHYSQRHAFFCLICCITEHQALVSCPNFLVIS 467
P L NF C R +FCL C H+A + P + I+
Sbjct: 267 PRLVNFTCN-ACGTAGDRSPYFCLQCNFMIHRACIDLPRVININ 309
>At2g03270.1 68415.m00280 DNA-binding protein, putative similar to
Swiss-Prot:Q60560 DNA-binding protein SMUBP-2
(Immunoglobulin MU binding protein 2) (SMUBP-2) (Insulin
II gene enhancer-binding protein)(RIPE3B-binding complex
3B2 P110 subunit) (RIP-1)[Mesocricetus auratus];
identical to putative helicase (atpc-2 gene) cDNA
NCBI_gi:11191230
Length = 639
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/70 (18%), Positives = 40/70 (57%)
Frame = +2
Query: 176 GHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETV 355
GHP ++ Q+ D+ LDA + + ++ +A + + M L G++ + + ++++++ +
Sbjct: 264 GHPARLLPQVLDSALDAQVLKGDNSGLAND--IRKEMKALNGKLLKAKDKNTRRLIQKEL 321
Query: 356 KHIGYDDSSK 385
+ +G ++ +
Sbjct: 322 RTLGKEERKR 331
>At3g43300.1 68416.m04570 guanine nucleotide exchange family protein
similar to SP|Q9Y6D5 Brefeldin A-inhibited guanine
nucleotide-exchange protein 2 {Homo sapiens}; contains
Pfam profile PF01369: Sec7 domain
Length = 1756
Score = 27.9 bits (59), Expect = 5.5
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 239 DPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRE---TVKHIGYDDSSKGFDYKTCS 409
DP+ +A +T + G L C K+ VD++K+ RE + ++ D +S G +T S
Sbjct: 523 DPNPAMASQTASVKGSSLQCLVNVLKSLVDWEKIRREAENSTRNANEDSASTGEPIETKS 582
>At1g54960.1 68414.m06277 NPK1-related protein kinase, putative
(ANP2) similar to protein kinase [Nicotiana tabacum]
gi|456309|dbj|BAA05648; identical to cDNA NPK1-related
protein kinase 2, partial cds GI:2342424
Length = 596
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 230 LNQDPDAKVACETITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDD 376
L+ + DAK +C+T+++ +L C + N + + V V H Y +
Sbjct: 431 LDNNTDAKKSCDTMSEISDILKCKFDENSGNGETETKVSMEVDHPSYSE 479
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 27.5 bits (58), Expect = 7.3
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = -1
Query: 594 SSAIF*LSLCASTTVNGMHSSVSSV--A*PNIKPWSPAPTSSSFLFSCTPAAMFGDCWSS 421
+S++F S A+T+ + + + SS A P+ S AP SSS +F T ++ SS
Sbjct: 203 NSSLFGASSSAATSTSPLFGAPSSATGATPSFSVASSAPGSSSSIFGATGSSPSFSVASS 262
Query: 420 AS 415
AS
Sbjct: 263 AS 264
>At1g05055.1 68414.m00506 basic transcription factor 2, 44kD
subunit-related contains weak similarity to
Swiss-Prot:Q13888 TFIIH basal transcription factor
complex p44 subunit (Basic transcription factor 2 44 kDa
subunit, BTF2-p44, General transcription factor IIH
polypeptide 2) [Homo sapiens]
Length = 421
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 565 CKHYSQRHAFFCLICCITEHQALVSCP 485
CKHY FCL C I H++L +CP
Sbjct: 385 CKHY------FCLDCDIYIHESLHNCP 405
>At5g50100.1 68418.m06204 expressed protein contains Pfam domain
PF04134: Protein of unknown function, DUF393
Length = 214
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 374 DSSKGFDYKTCSVMLALDQQSPNIAAGVHE-NRNDEEVGAG 493
+ ++G DYKT + Q N+ GV R EEVG G
Sbjct: 116 EDNQGLDYKTVMGQIHAIQSDGNVVKGVEAFRRLYEEVGLG 156
>At4g38660.1 68417.m05473 thaumatin, putative similar to
thaumatin-like protein [Arabidopsis thaliana]
GI:2435406, thaumatin-like protein precursor [Pyrus
pyrifolia] GI:3241854; contains Pfam profile PF00314:
Thaumatin family
Length = 345
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 288 TIPVLVMVSHATFASGS*FRCASRIASLIWSHILSG*PSPT 166
T+ V++ +T + GS F A+R +W ILS SPT
Sbjct: 14 TLSFTVLLLASTGSYGSTFTFANRCGYTVWPGILSNAGSPT 54
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,467,604
Number of Sequences: 28952
Number of extensions: 324292
Number of successful extensions: 894
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1206913392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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