Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11d13r
         (671 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2AES4 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_Q23DU2 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_Q8F870 Cluster: Putative uncharacterized protein; n=2; ...    33   6.3  
UniRef50_Q2GFT1 Cluster: Putative uncharacterized protein; n=6; ...    33   6.3  
UniRef50_Q4YW00 Cluster: Putative uncharacterized protein; n=5; ...    33   8.3  
UniRef50_A7SAV6 Cluster: Predicted protein; n=1; Nematostella ve...    33   8.3  

>UniRef50_Q2AES4 Cluster: Putative uncharacterized protein; n=1;
           Halothermothrix orenii H 168|Rep: Putative
           uncharacterized protein - Halothermothrix orenii H 168
          Length = 691

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +1

Query: 46  SITKISFNDIAWLWLDTNIDTKNCSTKQYIDNRKTIKATLSNILKRAALTHN 201
           ++ K++FNDI WL        KN   K Y   RK + + L++ILK  ++ +N
Sbjct: 449 NLYKLTFNDIYWLLFPNTESHKNPDPKLY---RKELLSLLNSILKGRSVNYN 497


>UniRef50_Q23DU2 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 252

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
 Frame = -1

Query: 344 VKELSIMYANI*MNTKKVTAS*TILQI-SM*PMICSWILNYEHIKMLDELCVNAARFKMF 168
           V ++ + YA I ++ ++ + +  +L I S    I SWI ++  + + + +C+N   F + 
Sbjct: 87  VLQMCLFYAKIYISKQEASIAYIVLYIFSDVLFISSWITSFAALILRNNICLNYCNFSLG 146

Query: 167 DNVALIVFLLSMYCLVEQFFVSILVSSHNQAISLNDIFVIL 45
            N+   +  L +Y +    +  I   S N  ISL  I + L
Sbjct: 147 FNIIFKIAALIVYQVSCSQYTEI--PSSNLIISLTVIMIFL 185


>UniRef50_Q8F870 Cluster: Putative uncharacterized protein; n=2;
           Leptospira interrogans|Rep: Putative uncharacterized
           protein - Leptospira interrogans
          Length = 234

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 28  LSDQSCSITKISFNDIAWLWLDTNIDTKNCSTKQYID-NRKTIKATLSN 171
           L+DQ+    KI   D+ W+  D + +  N  TK Y D N K  +A + N
Sbjct: 171 LNDQTEKPIKIEQQDLGWMLYDLDFEDYNFDTKSYKDANPKFFRAVIQN 219


>UniRef50_Q2GFT1 Cluster: Putative uncharacterized protein; n=6;
           Alphaproteobacteria|Rep: Putative uncharacterized
           protein - Ehrlichia chaffeensis (strain Arkansas)
          Length = 379

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 15/49 (30%), Positives = 29/49 (59%)
 Frame = -1

Query: 212 MLDELCVNAARFKMFDNVALIVFLLSMYCLVEQFFVSILVSSHNQAISL 66
           +L+ L     RFK+   +++ + LLS  C++  F VS +  +++Q +SL
Sbjct: 51  LLNPLVDKLQRFKLSRQLSVAIILLSSLCVIIAFLVSFIPLAYSQLLSL 99


>UniRef50_Q4YW00 Cluster: Putative uncharacterized protein; n=5;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 647

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 16/61 (26%), Positives = 35/61 (57%)
 Frame = -1

Query: 242 SWILNYEHIKMLDELCVNAARFKMFDNVALIVFLLSMYCLVEQFFVSILVSSHNQAISLN 63
           SW+ N ++ K  ++   N   F  FDN  ++++L S +C +  ++  I+ + +N+ I +N
Sbjct: 504 SWMENKKNGKTDNDFLKNLYDFPYFDNNKMVIYLTS-FCFLFHYY--IITNMYNKLIDIN 560

Query: 62  D 60
           +
Sbjct: 561 N 561


>UniRef50_A7SAV6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 580

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 8/44 (18%)
 Frame = -3

Query: 645 FDHVFCSGNYNTNQRRHNNYY--------RRSDYYRFNNYYYGC 538
           F +   +G YN+N   HNNY+        R + Y   NN+Y GC
Sbjct: 362 FHNNHSNGRYNSNHYGHNNYHNNHFNSHGRHNSYSSHNNHYNGC 405


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,345,664
Number of Sequences: 1657284
Number of extensions: 8931209
Number of successful extensions: 27993
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27727
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)