Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11d12r
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   1.0  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    24   1.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.5  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   9.6  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = -3

Query: 666 EYMLCRQEENDPRKCINEGKAVT---ACTLEFFRKVKKTC 556
           EY+L  ++    RKC+ +   +T      LE++  + K C
Sbjct: 34  EYVLLNEDNPCARKCVKDSVPMTCRYTFLLEWYHTLSKAC 73


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 408 EARVHDTKRPKPLPEPKAVYPDATPALPEDAE 313
           E  +HD +   PLP P+ V   A P L  D +
Sbjct: 101 EKGMHDQQNNNPLPSPRRV---AVPVLVRDGK 129


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 381 PKPLPEPKAVYPDATPALPEDAEKKP 304
           P+P+P P+      T + P  A ++P
Sbjct: 393 PEPVPTPEPQPTQTTESEPTQASEQP 418


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 547 LSQAGLLHFPEELQCTGSD 603
           L +A ++H  EE++  GSD
Sbjct: 521 LDKADMVHLVEEIERLGSD 539


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -1

Query: 263 ARYGEYATDMLVRDDAVLPIIKFTI 189
           AR+G Y  DM+     +  ++++++
Sbjct: 271 ARFGAYGPDMIYTPQDIRDLLQYSL 295


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 390 YHGLEPRRNIQSRGVVSLVSQACTDQKHLESS 485
           Y  L+P   I +R V    S+ C   +HL  S
Sbjct: 205 YLRLKPEGRISNRRVFISFSKICYLHQHLSKS 236


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 390 YHGLEPRRNIQSRGVVSLVSQACTDQKHLESS 485
           Y  L+P   I +R V    S+ C   +HL  S
Sbjct: 223 YLRLKPEGRISNRRVFISFSKICYLHQHLSKS 254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,082
Number of Sequences: 336
Number of extensions: 3241
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)