Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d12r
(695 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001016-1|AAH01016.1| 172|Homo sapiens NADH dehydrogenase (ubi... 130 6e-30
AL162423-2|CAH73980.1| 172|Homo sapiens NADH dehydrogenase (ubi... 130 6e-30
AF044953-1|AAD42056.1| 172|Homo sapiens NADH:ubiquinone oxidore... 130 6e-30
BC017698-1|AAH17698.1| 172|Homo sapiens zinc finger protein 580... 32 2.2
AL359054-1|CAB94389.1| 259|Homo sapiens LDL induced endothelial... 32 2.2
AF184939-1|AAD56549.1| 172|Homo sapiens LDL induced EC protein ... 32 2.2
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 3.0
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 3.0
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 3.0
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 31 3.9
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 3.9
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 31 3.9
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 3.9
AK125330-1|BAC86133.1| 1375|Homo sapiens protein ( Homo sapiens ... 31 3.9
BC151246-1|AAI51247.1| 2243|Homo sapiens DnaJ (Hsp40) homolog, s... 31 5.2
AY779857-1|AAV41096.1| 2243|Homo sapiens DnaJ domain-containing ... 31 5.2
AB014578-1|BAA31653.2| 2257|Homo sapiens KIAA0678 protein protein. 31 5.2
X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein. 30 6.9
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 30 6.9
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 30 6.9
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein. 30 6.9
AF417165-1|AAL11910.1| 610|Homo sapiens cytosolic nucleotidase ... 30 6.9
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 30 6.9
>BC001016-1|AAH01016.1| 172|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 8, 19kDa protein.
Length = 172
Score = 130 bits (313), Expect = 6e-30
Identities = 62/143 (43%), Positives = 85/143 (59%), Gaps = 1/143 (0%)
Frame = -3
Query: 693 GKYCETINNEYMLCRQEENDPRKCINEGKAVTACTLEFFRKVKKTCLAEFNQYSNCLDKS 514
G C+ N E+MLCR EE DPR+C+ EGK V C L+FFR++K+ C F +Y C+D
Sbjct: 33 GAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNKCALDFFRQIKRHCAEPFTEYWTCID-Y 91
Query: 513 SGDYAFRHCRKTQGVFDQCMLEKLNLPRPGFGYFCEARVHDTKRPKPLPE-PKAVYPDAT 337
+G FRHCRK Q FD+C+L+KL RP G ++V K +PLPE P P
Sbjct: 92 TGQQLFRHCRKQQAKFDECVLDKLGWVRPDLGEL--SKVTKVKTDRPLPENPYHSRPRPD 149
Query: 336 PALPEDAEKKPPRLGSRFYWMTE 268
P+ + + +P GSRFY+ T+
Sbjct: 150 PSPEIEGDLQPATHGSRFYFWTK 172
>AL162423-2|CAH73980.1| 172|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 8, 19kDa protein.
Length = 172
Score = 130 bits (313), Expect = 6e-30
Identities = 62/143 (43%), Positives = 85/143 (59%), Gaps = 1/143 (0%)
Frame = -3
Query: 693 GKYCETINNEYMLCRQEENDPRKCINEGKAVTACTLEFFRKVKKTCLAEFNQYSNCLDKS 514
G C+ N E+MLCR EE DPR+C+ EGK V C L+FFR++K+ C F +Y C+D
Sbjct: 33 GAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNKCALDFFRQIKRHCAEPFTEYWTCID-Y 91
Query: 513 SGDYAFRHCRKTQGVFDQCMLEKLNLPRPGFGYFCEARVHDTKRPKPLPE-PKAVYPDAT 337
+G FRHCRK Q FD+C+L+KL RP G ++V K +PLPE P P
Sbjct: 92 TGQQLFRHCRKQQAKFDECVLDKLGWVRPDLGEL--SKVTKVKTDRPLPENPYHSRPRPD 149
Query: 336 PALPEDAEKKPPRLGSRFYWMTE 268
P+ + + +P GSRFY+ T+
Sbjct: 150 PSPEIEGDLQPATHGSRFYFWTK 172
>AF044953-1|AAD42056.1| 172|Homo sapiens NADH:ubiquinone
oxidoreductase PGIV subunit protein.
Length = 172
Score = 130 bits (313), Expect = 6e-30
Identities = 62/143 (43%), Positives = 85/143 (59%), Gaps = 1/143 (0%)
Frame = -3
Query: 693 GKYCETINNEYMLCRQEENDPRKCINEGKAVTACTLEFFRKVKKTCLAEFNQYSNCLDKS 514
G C+ N E+MLCR EE DPR+C+ EGK V C L+FFR++K+ C F +Y C+D
Sbjct: 33 GAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNKCALDFFRQIKRHCAEPFTEYWTCID-Y 91
Query: 513 SGDYAFRHCRKTQGVFDQCMLEKLNLPRPGFGYFCEARVHDTKRPKPLPE-PKAVYPDAT 337
+G FRHCRK Q FD+C+L+KL RP G ++V K +PLPE P P
Sbjct: 92 TGQQLFRHCRKQQAKFDECVLDKLGWVRPDLGEL--SKVTKVKTDRPLPENPYHSRPRPD 149
Query: 336 PALPEDAEKKPPRLGSRFYWMTE 268
P+ + + +P GSRFY+ T+
Sbjct: 150 PSPEIEGDLQPATHGSRFYFWTK 172
>BC017698-1|AAH17698.1| 172|Homo sapiens zinc finger protein 580
protein.
Length = 172
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = -3
Query: 435 PRPGFGYFCEARVHDTKRPKPLPEPKAVYPDATPALPEDAEKKPPRLG 292
PRP D PK P PKA P +TP+ A +PPRLG
Sbjct: 6 PRPPHPRSSSPEAMDPPPPKAPPFPKAEGPSSTPS--SAAGPRPPRLG 51
>AL359054-1|CAB94389.1| 259|Homo sapiens LDL induced endothelial
cell protein protein.
Length = 259
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = -3
Query: 435 PRPGFGYFCEARVHDTKRPKPLPEPKAVYPDATPALPEDAEKKPPRLG 292
PRP D PK P PKA P +TP+ A +PPRLG
Sbjct: 93 PRPPHPRSSSPEAMDPPPPKAPPFPKAEGPSSTPS--SAAGPRPPRLG 138
>AF184939-1|AAD56549.1| 172|Homo sapiens LDL induced EC protein
protein.
Length = 172
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = -3
Query: 435 PRPGFGYFCEARVHDTKRPKPLPEPKAVYPDATPALPEDAEKKPPRLG 292
PRP D PK P PKA P +TP+ A +PPRLG
Sbjct: 6 PRPPHPRSSSPEAMDPPPPKAPPFPKAEGPSSTPS--SAAGPRPPRLG 51
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 384 RPKPLPEPKAVYPDATPALPEDAEKKPPRLGSR 286
+P+P+PEPK P+ ++ EK PR SR
Sbjct: 249 KPEPIPEPKEPSPEKNSKKEKEKEKTQPRSRSR 281
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 384 RPKPLPEPKAVYPDATPALPEDAEKKPPRLGSR 286
+P+P+PEPK P+ ++ EK PR SR
Sbjct: 249 KPEPIPEPKEPSPEKNSKKEQEKEKTRPRSRSR 281
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 384 RPKPLPEPKAVYPDATPALPEDAEKKPPRLGSR 286
+P+P+PEPK P+ ++ EK PR SR
Sbjct: 249 KPEPIPEPKEPSPEKNSKKEQEKEKTRPRSRSR 281
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.1 bits (67), Expect = 3.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 384 RPKPLPEPKAVYPDATPALPEDAEKKPPRLGSR 286
+P+P+PEPK P+ ++ EK PR SR
Sbjct: 249 KPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSR 281
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.1 bits (67), Expect = 3.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 384 RPKPLPEPKAVYPDATPALPEDAEKKPPRLGSR 286
+P+P+PEPK P+ ++ EK PR SR
Sbjct: 249 KPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSR 281
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.1 bits (67), Expect = 3.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 384 RPKPLPEPKAVYPDATPALPEDAEKKPPRLGSR 286
+P+P+PEPK P+ ++ EK PR SR
Sbjct: 249 KPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSR 281
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 31.1 bits (67), Expect = 3.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 384 RPKPLPEPKAVYPDATPALPEDAEKKPPRLGSR 286
+P+P+PEPK P+ ++ EK PR SR
Sbjct: 249 KPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSR 281
>AK125330-1|BAC86133.1| 1375|Homo sapiens protein ( Homo sapiens
cDNA FLJ43340 fis, clone NT2RI3007543. ).
Length = 1375
Score = 31.1 bits (67), Expect = 3.9
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = -3
Query: 507 DYAFRHCRKTQGVFDQCMLEKLNLPRPGFGYFCEA----RVHDTKR-PK-PLPEPKAVYP 346
D+ R T+ ++ C + +N P+ FC ++ DT R P P+ +P +
Sbjct: 353 DFTPRLQSNTRALYQYCPIPIINYPQLENELFCNIYYLKQLCDTLRFPNWPIKDPVKLLK 412
Query: 345 DATPALPEDAEKKPPRL 295
D A ++ EKKPP +
Sbjct: 413 DTLDAWKKEVEKKPPMM 429
>BC151246-1|AAI51247.1| 2243|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 13 protein.
Length = 2243
Score = 30.7 bits (66), Expect = 5.2
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = -3
Query: 507 DYAFRHCRKTQGVFDQCMLEKLNLPRPGFGYFCEA----RVHDTKR-PK-PLPEPKAVYP 346
D+ R T+ ++ C + +N P+ FC ++ DT R P P+ +P +
Sbjct: 1221 DFTPRLHSNTRALYQYCPIPIINYPQLENELFCNIYYLKQLCDTLRFPDWPIKDPVKLLK 1280
Query: 345 DATPALPEDAEKKPPRL 295
D A ++ EKKPP +
Sbjct: 1281 DTLDAWKKEVEKKPPMM 1297
>AY779857-1|AAV41096.1| 2243|Homo sapiens DnaJ domain-containing
protein RME-8 protein.
Length = 2243
Score = 30.7 bits (66), Expect = 5.2
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = -3
Query: 507 DYAFRHCRKTQGVFDQCMLEKLNLPRPGFGYFCEA----RVHDTKR-PK-PLPEPKAVYP 346
D+ R T+ ++ C + +N P+ FC ++ DT R P P+ +P +
Sbjct: 1221 DFTPRLQSNTRALYQYCPIPIINYPQLENELFCNIYYLKQLCDTLRFPDWPIKDPVKLLK 1280
Query: 345 DATPALPEDAEKKPPRL 295
D A ++ EKKPP +
Sbjct: 1281 DTLDAWKKEVEKKPPMM 1297
>AB014578-1|BAA31653.2| 2257|Homo sapiens KIAA0678 protein protein.
Length = 2257
Score = 30.7 bits (66), Expect = 5.2
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = -3
Query: 507 DYAFRHCRKTQGVFDQCMLEKLNLPRPGFGYFCEA----RVHDTKR-PK-PLPEPKAVYP 346
D+ R T+ ++ C + +N P+ FC ++ DT R P P+ +P +
Sbjct: 1235 DFTPRLHSNTRALYQYCPIPIINYPQLENELFCNIYYLKQLCDTLRFPDWPIKDPVKLLK 1294
Query: 345 DATPALPEDAEKKPPRL 295
D A ++ EKKPP +
Sbjct: 1295 DTLDAWKKEVEKKPPMM 1311
>X90569-1|CAA62189.1| 7962|Homo sapiens elastic titin protein.
Length = 7962
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 399 VHDTKRPKPLPEPKAVYPDATPALPEDAEKKPPRL 295
V + K+P P+P+ K P P +P+ E+K P L
Sbjct: 6623 VPEEKKPVPVPKKKEAPPAKVPEVPKKPEEKVPVL 6657
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 30.3 bits (65), Expect = 6.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 375 PLPEPKAVYPDATPALPEDAEKKPP 301
P P P +YP PALP A PP
Sbjct: 335 PPPPPNRMYPPPPPALPSSAPSGPP 359
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 30.3 bits (65), Expect = 6.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 375 PLPEPKAVYPDATPALPEDAEKKPP 301
P P P +YP PALP A PP
Sbjct: 335 PPPPPNRMYPPPPPALPSSAPSGPP 359
>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
Length = 30000
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 399 VHDTKRPKPLPEPKAVYPDATPALPEDAEKKPPRL 295
V + K+P P+P+ K P P +P+ E+K P L
Sbjct: 10885 VPEEKKPVPVPKKKEAPPAKVPEVPKKPEEKVPVL 10919
>AF417165-1|AAL11910.1| 610|Homo sapiens cytosolic nucleotidase Ib
alpha protein.
Length = 610
Score = 30.3 bits (65), Expect = 6.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 399 VHDTKRPKPLPEPKAVYPDATPALPEDAEKKPP 301
+HD+ P PL ++ P A+P LP + +PP
Sbjct: 163 LHDSS-PPPLSRQPSLQPPASPQLPRSLDSRPP 194
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 30.3 bits (65), Expect = 6.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 375 PLPEPKAVYPDATPALPEDAEKKPP 301
P P P +YP PALP A PP
Sbjct: 335 PPPPPNRMYPPPPPALPSSAPSGPP 359
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,164,359
Number of Sequences: 237096
Number of extensions: 1877920
Number of successful extensions: 5531
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5519
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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