Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11d12f
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding pr...    27   0.46 
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    24   4.3  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    24   4.3  

>AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding
           protein AgamOBP11 protein.
          Length = 192

 Score = 27.1 bits (57), Expect = 0.46
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 220 FHLGKYCETINNEYMLCRQEENDP 291
           F LG+ CE  +N +++C Q+ + P
Sbjct: 121 FGLGECCENFSNRHLVCLQQNSLP 144


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = +1

Query: 304 NEGKAVTACTLEFFRKV---KKTCLAEFNQYSNCLDKSSG 414
           N   A T   L+  +K+   K TC   ++ + NC  +S G
Sbjct: 234 NPNNAQTVACLQNQKKLACKKSTCQQAYDTFQNCFGESRG 273


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
 Frame = +1

Query: 304 NEGKAVTACTLEFFRKV---KKTCLAEFNQYSNCLDKSSG 414
           N   A T   L+  +K+   K TC   ++ + NC  +S G
Sbjct: 234 NPNNAQTVACLQNQKKLACKKSTCQQAYDTFQNCFGESRG 273


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,114
Number of Sequences: 2352
Number of extensions: 12296
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)