Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11d11f
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   1.5  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.4  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.6  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   6.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.9  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = +1

Query: 253 REDTPDIKALREKEKGDWRKLTLEE 327
           +ED+ +++  ++K+ G+W +L   E
Sbjct: 31  KEDSFEVELCKDKDAGEWFRLVAGE 55


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 193 FNGQPNYVDRPDFP 234
           +NG PNY+    FP
Sbjct: 443 YNGDPNYISPEVFP 456


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 193 FNGQPNYVDRPDFP 234
           +NG PNY+    FP
Sbjct: 391 YNGDPNYISPEVFP 404


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 256 EDTPDIKALREKEKGDWRKLTLEEKKTL 339
           +D P I+ + E E  D +K   ++KKT+
Sbjct: 242 KDKPKIEDVGEDEDEDTKKEDKKKKKTI 269


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -2

Query: 159 GKFSVSSGSSPGADRNTDSIDERPAHQ 79
           GKF V + SSP +      +   P H+
Sbjct: 219 GKFEVPTKSSPRSSPVQSDVSLSPVHE 245


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 307 ANHPFLFHG 281
           ANHPF  HG
Sbjct: 530 ANHPFHLHG 538


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,708
Number of Sequences: 336
Number of extensions: 3444
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)