Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d11f
(601 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48167| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_12834| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_17735| Best HMM Match : PAN (HMM E-Value=0.00083) 31 0.71
SB_12484| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_11138| Best HMM Match : Yippee (HMM E-Value=6.1) 29 2.2
SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_18948| Best HMM Match : ANF_receptor (HMM E-Value=7.2e-17) 29 2.9
SB_12684| Best HMM Match : ANF_receptor (HMM E-Value=2e-05) 29 2.9
SB_29285| Best HMM Match : DUF1201 (HMM E-Value=2.4) 29 3.8
SB_43624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094) 28 5.0
SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2) 28 6.6
SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_57237| Best HMM Match : RRM_1 (HMM E-Value=0.071) 27 8.8
SB_3382| Best HMM Match : WD40 (HMM E-Value=2.8e-05) 27 8.8
SB_47152| Best HMM Match : Vicilin_N (HMM E-Value=5.4) 27 8.8
>SB_48167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +1
Query: 232 PLPAIRFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAEFQAPTGEWKGVVG 411
P+P R +E D++AL+ KEKG W L+ E++ LY++ F +T E + K VVG
Sbjct: 26 PVPIAR-QEFGSDLEALKAKEKGPWTALSKEDRVALYQSQFPKTLQESKLGEPYAKKVVG 84
Query: 412 WALVLSSLAAWIYMAMKVFV 471
VL SL+ + ++ ++
Sbjct: 85 GVGVLISLSLAFFAFLRTYM 104
>SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1102
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = -1
Query: 313 ICANHPFLFHGEP*CQGCPHGTGWQAGGSQACLRSWAGR*NHSLPTHGHQSWQVQC 146
IC + FL CQ CP GT +A G AC+ G+ + T+ V C
Sbjct: 567 ICVSGKFLNTTTLSCQVCPKGTFQEANGKTACIPCTGGKITLNNATNSSSGCLVAC 622
>SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 32.3 bits (70), Expect = 0.31
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 44 SSPILPAKWPII*CAGRSSMLSVF--LSAPGLDPLETLNLPRLVTVSG*AMVSTASPTT* 217
SSP+LP ++ + SS ++ SAP L+ T N A+ S+ SPTT
Sbjct: 671 SSPVLPTTTSVLTSSMESSSMATTSTTSAPSLESSMTTNSTTSTLAQAVAISSSVSPTTT 730
Query: 218 TGLTSPCLPSGSVRTPLTLRLSVK 289
+ LTS S T T S++
Sbjct: 731 SVLTSSMEFSSMATTSTTTTPSLE 754
Score = 29.9 bits (64), Expect = 1.6
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 44 SSPILPAKWPII*CAGRSSMLSVFL-SAPGLDPLETLNLPRLVTVSG*AMVSTASPTT*T 220
SSP+LP ++ + SSM + S P L+ T N A+ S PTT +
Sbjct: 519 SSPVLPTTTSVLTSSMESSMATTSTTSTPSLESSMTTNNTTSTLAEAVAISSLVLPTTTS 578
Query: 221 GLTSPCLPSGSVRTPLT 271
LTS + S S+ T T
Sbjct: 579 VLTS-SMESSSMATTST 594
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +2
Query: 44 SSPILPAKWPII*CAGRSSMLSVF--LSAPGLDPLETLNLPRLVTVSG*AMVSTASPTT* 217
SS +LP ++ + SS ++ S P L+ T N L A S PTT
Sbjct: 418 SSSVLPTTTSVLTSSMESSSMATTSTTSTPSLESSMTSNNTTLTLAEAVATSSPVLPTTT 477
Query: 218 TGLTSPCLPSGSVRTPLT 271
+ LTS PS T T
Sbjct: 478 SVLTSSMEPSSMATTSTT 495
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +2
Query: 44 SSPILPAKWPII*CAGRSSMLSVF--LSAPGLDPLETLNLPRLVTVSG*AMVSTASPTT* 217
SSP+LP ++ + SS ++ S P L+ T N A+ S PTT
Sbjct: 773 SSPVLPTTTSVLTSSMESSSIATTSTTSTPSLESSMTTNSTTSTLAEAVAISSPVLPTTT 832
Query: 218 TGLTSPCLPSGSVRTPLT 271
+ LTS + S S+ T T
Sbjct: 833 SVLTS-SMESSSIATTST 849
>SB_12834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1261
Score = 31.5 bits (68), Expect = 0.54
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +1
Query: 229 FPLPAIRFREDTPDIKALREKEKGDWRKLTLEEKKTLYRASFCQTFAE-FQAPTGEWKGV 405
FPLP F +LR ++ +L+ ++ RA+ + E F++P G KG
Sbjct: 1034 FPLPVGFFCLVYCLFMSLRGTQRNS-NELSESYRERETRAAVLEVVCEAFRSPAGSSKGA 1092
Query: 406 VGWALVLSSLAAWIYMAMKVFVYSP 480
V W VL++ ++++ + F+ SP
Sbjct: 1093 VYWESVLTA-RRFVFLCLAAFIKSP 1116
>SB_17735| Best HMM Match : PAN (HMM E-Value=0.00083)
Length = 431
Score = 31.1 bits (67), Expect = 0.71
Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Frame = +1
Query: 184 GYGFNGQPNYVDRPDFPLPAIRFREDTPDIKALREKEKG--DWRKLTLEEKKTLYRASFC 357
GY + G D + LP +R G +W +LT+ E TLY
Sbjct: 258 GYNYEGGKALDDEQETKLPTFWATPMKHVCIGMRNSSGGTVEWLQLTVRELTTLYEVFST 317
Query: 358 QTFAEFQAPTGEWKGVVG 411
P +W G+VG
Sbjct: 318 NNHHPTNIPLSKWLGLVG 335
>SB_12484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 10/52 (19%)
Frame = -2
Query: 150 SVSSGSSPGADRNTDSIDERPAH---QIIGHFAGRIGL-------ELYENHT 25
+V + +P + +IDE+PAH Q +GH AG I L E Y HT
Sbjct: 7 TVCTKQNPIFEEEMQNIDEKPAHENLQAMGHMAGSISLLNKTAEKEFYPKHT 58
>SB_11138| Best HMM Match : Yippee (HMM E-Value=6.1)
Length = 336
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 527 ECWTLR*IPSMDLPPSGTTKTTAGS 601
+C T+R IPS D+P +G KT GS
Sbjct: 170 QCNTIRGIPSFDMPFNGVLKTGNGS 194
>SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 304 WRKLTLEEKKTLYRASFCQTFAEFQAPTGEW 396
WRK + EKK + C+T + + P+G W
Sbjct: 210 WRKASHAEKKVVRACPICRTPSGYVVPSGVW 240
>SB_18948| Best HMM Match : ANF_receptor (HMM E-Value=7.2e-17)
Length = 335
Score = 29.1 bits (62), Expect = 2.9
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -2
Query: 303 ITLFFFTESLNVRGVLTEPDGRQGEVRPVYVVGLAVETIAYPLTVTNLGKFSVSSGSSPG 124
+T F +++ + G LT P R +P+ G V IA P +FS SS
Sbjct: 88 VTWQIFHQAVAIVGPLTSPMVRA--TQPL-CSGFHVPQIA-PYATDPAFEFSPSSYKYLL 143
Query: 123 ADRNTDSIDERPAHQIIGHFA-GRIGL 46
R++DSI+ R IGHF R+GL
Sbjct: 144 RMRSSDSIENRAIADFIGHFNWTRLGL 170
>SB_12684| Best HMM Match : ANF_receptor (HMM E-Value=2e-05)
Length = 253
Score = 29.1 bits (62), Expect = 2.9
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -2
Query: 303 ITLFFFTESLNVRGVLTEPDGRQGEVRPVYVVGLAVETIAYPLTVTNLGKFSVSSGSSPG 124
+T F +++ + G LT P R +P+ G V IA P +FS SS
Sbjct: 88 VTWQIFHQAVAIVGPLTSPMVRA--TQPL-CSGFHVPQIA-PYATDPAFEFSPSSYKYLL 143
Query: 123 ADRNTDSIDERPAHQIIGHFA-GRIGL 46
R++DSI+ R IGHF R+GL
Sbjct: 144 RMRSSDSIENRAIADFIGHFNWTRLGL 170
>SB_29285| Best HMM Match : DUF1201 (HMM E-Value=2.4)
Length = 332
Score = 28.7 bits (61), Expect = 3.8
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 3/156 (1%)
Frame = +1
Query: 136 STGNTELAKIGDREWVGYGFNGQPNYVDRPDFPLPAIRFREDTPDIKALREKEKGDWRKL 315
+TG T+L ++ N + DRP L ++ D P AL R +
Sbjct: 66 NTGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWDAPCSGALSAAGVVVTRSV 125
Query: 316 TLEEKKTLYRASFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWIYMAMKVFVYSPIPDSL 495
T R FC+ +A P VVG L ++ +A W Y ++ I DS
Sbjct: 126 TATLASADVRRCFCR-YA--PPPIASVYLVVGLLLAVAVVAIW-YCHKQIVESRRIRDSG 181
Query: 496 SEE-RQKAQLQRMLDLKVNPIDGLASKW--DYENNR 594
++ R++ + +RM D +V ++ +W Y NR
Sbjct: 182 EQQPRRRRRPRRMNDSQVVSVN---QQWFDHYSGNR 214
>SB_43624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Frame = -3
Query: 164 ILASSVFPVD---PALAQTGTRIALMSARRIR*LAILLEGLDLNCTKITLTNTSKIR 3
++A+ VFP ++++ G + MS+ I L ++ L+ N TK+ +TN +K+R
Sbjct: 153 LMAAGVFPSSCTCSSVSRAGVN-SPMSSMSIEPLIARIQLLERNLTKLVMTNLTKVR 208
>SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094)
Length = 1671
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 472 TQRLSWPCRSKQPKMRGLEPNQRLPSTLRWGPGTQRRSDR 353
T S P +S M PN +PST + GP RR +R
Sbjct: 1035 TPNTSMPTKSTPTSMPRKTPNTFIPSTPQVGPTPPRRGNR 1074
>SB_48118| Best HMM Match : DUF1314 (HMM E-Value=3.2)
Length = 341
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 283 REKEKGDWRKLTLEEKKTLYRASFCQT 363
RE + D ++ +E+KK + +A+FCQT
Sbjct: 77 REILENDEKRCPIEDKKKVKKATFCQT 103
>SB_45209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -1
Query: 271 CQGCPHGTGWQAGGSQACLRSWAGR*NHSLPT 176
C+ CP GT GS CLR G SLPT
Sbjct: 612 CKPCPSGTFTDVPGSSECLR--CGANTVSLPT 641
>SB_57237| Best HMM Match : RRM_1 (HMM E-Value=0.071)
Length = 210
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 321 RRKENSVQSFILSDLR*VPGPHRRVEGSRWLGSSPLIFGCLDLHG 455
R KE V ++LSD V GPH+R++ S W + G L+ G
Sbjct: 71 RCKEVQVIPWVLSDTNYVRGPHQRLDTS-WTVFVGGLHGMLNAEG 114
>SB_3382| Best HMM Match : WD40 (HMM E-Value=2.8e-05)
Length = 375
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 105 SIDERPAHQIIGHFAGRIGLELYENHTH 22
S+DER + AG + +E Y NH H
Sbjct: 292 SLDERSLEALAPRVAGSLDMETYLNHRH 319
>SB_47152| Best HMM Match : Vicilin_N (HMM E-Value=5.4)
Length = 330
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -1
Query: 499 HSMSQE*DCTQRLSWPCRSKQPKMRGLEPNQRLPST 392
HS C R P K+PK R L P QR ST
Sbjct: 193 HSHHYRRICRYRQRRPLTPKRPKTRQLPPEQRCKST 228
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,576,861
Number of Sequences: 59808
Number of extensions: 468446
Number of successful extensions: 1472
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1472
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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