Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11d10r
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.9  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   8.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.9  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 265 FVYLQISYDIHYKMKTT*CILMPFTYMHFTVF 360
           F+YL   Y I+Y +     I   +T   F +F
Sbjct: 150 FIYLFTVYYIYYSVHEASIINFGYTLAKFMIF 181


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = -3

Query: 480 SSTDSGLLEMCAY*QTNKKRQQ*NRFFNLYLKVLISI*EIEYCKVHVSKWH*DTLCC 310
           S T  GL E+    +  KKR++    F    KV+ SI + +  KV VS    ++ CC
Sbjct: 532 SVTKEGL-ELPEDEEEKKKREEDKAKFEGLCKVMKSILDNKVEKVVVSNRLVESPCC 587


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/45 (24%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 394 VFKSINQHLRN*IL*SACK*MALGYTMLFSFCNGCHN-*FVNIQI 263
           V  S+ + ++N +  +AC+  ++   +LFS C    +  F+ +Q+
Sbjct: 243 VVTSVLKLMQNKLEITACRLFSIDNALLFSICGAASSYLFIMLQL 287


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 279 NQL*HPLQNENNIVYPN 329
           NQ+  P+ N  N+ YP+
Sbjct: 347 NQIYQPVTNLTNLTYPS 363


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,171
Number of Sequences: 336
Number of extensions: 3688
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)