Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11d10r
         (653 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X57801-1|CAA40939.1|  237|Homo sapiens immunoglobulin lambda lig...    31   2.7  
U07992-1|AAA87677.1|  219|Homo sapiens immunoglobulin lambda lig...    31   2.7  
X72746-1|CAA51276.1|  129|Homo sapiens Ig lambda light chain var...    30   8.3  
U09890-1|AAA56696.1|   99|Homo sapiens immunoglobulin lambda cha...    30   8.3  

>X57801-1|CAA40939.1|  237|Homo sapiens immunoglobulin lambda light
           chain protein.
          Length = 237

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -2

Query: 217 VLPCSISTRGYGCYRYIEWYNTH-GFNQYSHRYDIDKSLPLINNRWA 80
           ++ C+  +   G Y+YI WY  H G       YD+DK    ++NR++
Sbjct: 38  IISCTGPSSDIGDYQYISWYQQHPGKAPKLIIYDVDKRPSGVSNRFS 84


>U07992-1|AAA87677.1|  219|Homo sapiens immunoglobulin lambda light
           chain protein.
          Length = 219

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -2

Query: 217 VLPCSISTRGYGCYRYIEWYNTH-GFNQYSHRYDIDKSLPLINNRWA 80
           ++ C+  +   G Y+YI WY  H G       YD+DK    ++NR++
Sbjct: 20  IISCTGPSSDIGDYQYISWYQQHPGKAPKLIIYDVDKRPSGVSNRFS 66


>X72746-1|CAA51276.1|  129|Homo sapiens Ig lambda light chain
           variable region (VJC) protein.
          Length = 129

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -2

Query: 214 LPCSISTRGYGCYRYIEWYNTH-GFNQYSHRYDIDKSLPLINNRWALC 74
           + C+ ++   G Y Y+ WY  H G       YD+ K    ++NR++ C
Sbjct: 20  ISCTGTSSDVGGYNYVSWYQQHSGKVPKLMIYDVSKRPSGVSNRFSGC 67


>U09890-1|AAA56696.1|   99|Homo sapiens immunoglobulin lambda chain
           variable region protein.
          Length = 99

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 214 LPCSISTRGYGCYRYIEWYNTH-GFNQYSHRYDIDKSLPLINNRWA 80
           +PC+ +T   G Y Y+ WY  H G       YD+ +    ++NR++
Sbjct: 20  IPCTGTTGDVGGYDYVSWYQHHPGKAPKLIIYDVSRRPSGVSNRFS 65


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,395,042
Number of Sequences: 237096
Number of extensions: 1749317
Number of successful extensions: 7061
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7061
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)