Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11d10f
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    26   0.28 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    26   0.28 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   7.9  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
 Frame = -2

Query: 476 DNLPGCICEHSIFVDNSSSEFGGLWKNIYRCHLSSS-----LHFEMF*LQSSIPLLCKFG 312
           ++LPGC    S     +  +F  L ++ +  HL+S+     LHF    L+S      +  
Sbjct: 373 ESLPGCHMVDSCSNIQTGEQFARLLRHNFNRHLNSNRAPLGLHFHASWLKSKKEFKEELI 432

Query: 311 QFVSSICYLNSLL*YYFISSIHNLWFSFESSLLNTL 204
           +F+  +   N +   YF++++  + +    + LN L
Sbjct: 433 KFIEEMLQRNDV---YFVTNLQVIQWMQNPTELNGL 465


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
 Frame = -2

Query: 476 DNLPGCICEHSIFVDNSSSEFGGLWKNIYRCHLSSS-----LHFEMF*LQSSIPLLCKFG 312
           ++LPGC    S     +  +F  L ++ +  HL+S+     LHF    L+S      +  
Sbjct: 380 ESLPGCHMVDSCSNIQTGEQFARLLRHNFNRHLNSNRAPLGLHFHASWLKSKKEFKEELI 439

Query: 311 QFVSSICYLNSLL*YYFISSIHNLWFSFESSLLNTL 204
           +F+  +   N +   YF++++  + +    + LN L
Sbjct: 440 KFIEEMLQRNDV---YFVTNLQVIQWMQNPTELNGL 472


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 575 IFMYFLCTNCFISYKSTFIVDLTSKI 498
           IFM+ + T     YKST I+++  ++
Sbjct: 61  IFMHIVPTKLISFYKSTAILEIAFEV 86


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 413 QIHSNCCQQR*SVHRYIQASCLT 481
           +IH + CQ    ++RY +   LT
Sbjct: 211 EIHFDLCQAADDLNRYFEVQVLT 233


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 413 QIHSNCCQQR*SVHRYIQASCLT 481
           +IH + CQ    ++RY +   LT
Sbjct: 207 EIHFDLCQAADDLNRYFEVQVLT 229


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = -2

Query: 593 NFLGLWIFMYFLCTNCFISYKSTFIVDL 510
           +F+  W+++     +    YK+T+++ L
Sbjct: 55  SFVSYWLYLVLEADDMLPIYKNTYLIIL 82


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = -2

Query: 593 NFLGLWIFMYFLCTNCFISYKSTFIVDL 510
           +F+  W+++     +    YK+T+++ L
Sbjct: 73  SFVSYWLYLVLEADDMLPIYKNTYLIIL 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,674
Number of Sequences: 336
Number of extensions: 2608
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)