Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d10f
(597 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93241-3|CAI19835.1| 421|Homo sapiens protein ( Human DNA seque... 33 0.77
CR456456-1|CAG30342.1| 421|Homo sapiens dJ222E13.3 protein. 33 0.77
BC095411-1|AAH95411.1| 421|Homo sapiens polymerase (DNA-directe... 33 0.77
BC056912-1|AAH56912.2| 392|Homo sapiens polymerase (DNA-directe... 33 0.77
BC049840-1|AAH49840.1| 421|Homo sapiens polymerase (DNA-directe... 33 0.77
BC019643-1|AAH19643.1| 229|Homo sapiens POLDIP3 protein protein. 33 0.77
BC001488-1|AAH01488.2| 417|Homo sapiens POLDIP3 protein protein. 33 0.77
AY506562-1|AAR91612.1| 185|Homo sapiens polymerase delta intera... 33 0.77
AY422990-1|AAQ94604.1| 421|Homo sapiens RNA-binding protein P46... 33 0.77
AL160112-1|CAB77059.1| 392|Homo sapiens hypothetical protein pr... 33 0.77
AL160111-1|CAB77058.1| 421|Homo sapiens hypothetical protein pr... 33 0.77
AB055760-1|BAB33368.2| 424|Homo sapiens KIAA1649 protein protein. 33 0.77
>Z93241-3|CAI19835.1| 421|Homo sapiens protein ( Human DNA sequence
from clone RP1-222E13 on chromosome 22. ).
Length = 421
Score = 33.1 bits (72), Expect = 0.77
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 207 GVQQGALKAKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKL--EHLKMQRRGQ 380
G+QQG L + + + ++++I ++DAR KL +DAR KL + + + +G+
Sbjct: 35 GIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLG----VKDAREKLLQKDARFRIKGK 90
Query: 381 MTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTP 497
+ + K TV K R D +R+ +S ++P
Sbjct: 91 VQDAREMLNSRKQQTTVPQKPRQVAD-AREKISLKRSSP 128
>CR456456-1|CAG30342.1| 421|Homo sapiens dJ222E13.3 protein.
Length = 421
Score = 33.1 bits (72), Expect = 0.77
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 207 GVQQGALKAKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKL--EHLKMQRRGQ 380
G+QQG L + + + ++++I ++DAR KL +DAR KL + + + +G+
Sbjct: 35 GIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLG----VKDAREKLLQKDARFRIKGK 90
Query: 381 MTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTP 497
+ + K TV K R D +R+ +S ++P
Sbjct: 91 VQDAREMLNSRKQQTTVPQKPRQVAD-AREKISLKRSSP 128
>BC095411-1|AAH95411.1| 421|Homo sapiens polymerase (DNA-directed),
delta interacting protein 3 protein.
Length = 421
Score = 33.1 bits (72), Expect = 0.77
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 207 GVQQGALKAKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKL--EHLKMQRRGQ 380
G+QQG L + + + ++++I ++DAR KL +DAR KL + + + +G+
Sbjct: 35 GIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLG----VKDAREKLLQKDARFRIKGK 90
Query: 381 MTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTP 497
+ + K TV K R D +R+ +S ++P
Sbjct: 91 VQDAREMLNSRKQQTTVPQKPRQVAD-AREKISLKRSSP 128
>BC056912-1|AAH56912.2| 392|Homo sapiens polymerase (DNA-directed),
delta interacting protein 3 protein.
Length = 392
Score = 33.1 bits (72), Expect = 0.77
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 207 GVQQGALKAKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKL--EHLKMQRRGQ 380
G+QQG L + + + ++++I ++DAR KL +DAR KL + + + +G+
Sbjct: 35 GIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLG----VKDAREKLLQKDARFRIKGK 90
Query: 381 MTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTP 497
+ + K TV K R D +R+ +S ++P
Sbjct: 91 VQDAREMLNSRKQQTTVPQKPRQVAD-AREKISLKRSSP 128
>BC049840-1|AAH49840.1| 421|Homo sapiens polymerase (DNA-directed),
delta interacting protein 3 protein.
Length = 421
Score = 33.1 bits (72), Expect = 0.77
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 207 GVQQGALKAKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKL--EHLKMQRRGQ 380
G+QQG L + + + ++++I ++DAR KL +DAR KL + + + +G+
Sbjct: 35 GIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLG----VKDAREKLLQKDARFRIKGK 90
Query: 381 MTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTP 497
+ + K TV K R D +R+ +S ++P
Sbjct: 91 VQDAREMLNSRKQQTTVPQKPRQVAD-AREKISLKRSSP 128
>BC019643-1|AAH19643.1| 229|Homo sapiens POLDIP3 protein protein.
Length = 229
Score = 33.1 bits (72), Expect = 0.77
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 207 GVQQGALKAKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKL--EHLKMQRRGQ 380
G+QQG L + + + ++++I ++DAR KL +DAR KL + + + +G+
Sbjct: 35 GIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLG----VKDAREKLLQKDARFRIKGK 90
Query: 381 MTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTP 497
+ + K TV K R D +R+ +S ++P
Sbjct: 91 VQDAREMLNSRKQQTTVPQKPRQVAD-AREKISLKRSSP 128
>BC001488-1|AAH01488.2| 417|Homo sapiens POLDIP3 protein protein.
Length = 417
Score = 33.1 bits (72), Expect = 0.77
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 207 GVQQGALKAKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKL--EHLKMQRRGQ 380
G+QQG L + + + ++++I ++DAR KL +DAR KL + + + +G+
Sbjct: 31 GIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLG----VKDAREKLLQKDARFRIKGK 86
Query: 381 MTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTP 497
+ + K TV K R D +R+ +S ++P
Sbjct: 87 VQDAREMLNSRKQQTTVPQKPRQVAD-AREKISLKRSSP 124
>AY506562-1|AAR91612.1| 185|Homo sapiens polymerase delta
interacting protein 46 protein.
Length = 185
Score = 33.1 bits (72), Expect = 0.77
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 207 GVQQGALKAKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKL--EHLKMQRRGQ 380
G+QQG L + + + ++++I ++DAR KL +DAR KL + + + +G+
Sbjct: 35 GIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLG----VKDAREKLLQKDARFRIKGK 90
Query: 381 MTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTP 497
+ + K TV K R D +R+ +S ++P
Sbjct: 91 VQDAREMLNSRKQQTTVPQKPRQVAD-AREKISLKRSSP 128
>AY422990-1|AAQ94604.1| 421|Homo sapiens RNA-binding protein P46
protein.
Length = 421
Score = 33.1 bits (72), Expect = 0.77
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 207 GVQQGALKAKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKL--EHLKMQRRGQ 380
G+QQG L + + + ++++I ++DAR KL +DAR KL + + + +G+
Sbjct: 35 GIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLG----VKDAREKLLQKDARFRIKGK 90
Query: 381 MTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTP 497
+ + K TV K R D +R+ +S ++P
Sbjct: 91 VQDAREMLNSRKQQTTVPQKPRQVAD-AREKISLKRSSP 128
>AL160112-1|CAB77059.1| 392|Homo sapiens hypothetical protein
protein.
Length = 392
Score = 33.1 bits (72), Expect = 0.77
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 207 GVQQGALKAKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKL--EHLKMQRRGQ 380
G+QQG L + + + ++++I ++DAR KL +DAR KL + + + +G+
Sbjct: 35 GIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLG----VKDAREKLLQKDARFRIKGK 90
Query: 381 MTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTP 497
+ + K TV K R D +R+ +S ++P
Sbjct: 91 VQDAREMLNSRKQQTTVPQKPRQVAD-AREKISLKRSSP 128
>AL160111-1|CAB77058.1| 421|Homo sapiens hypothetical protein
protein.
Length = 421
Score = 33.1 bits (72), Expect = 0.77
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 207 GVQQGALKAKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKL--EHLKMQRRGQ 380
G+QQG L + + + ++++I ++DAR KL +DAR KL + + + +G+
Sbjct: 35 GIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLG----VKDAREKLLQKDARFRIKGK 90
Query: 381 MTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTP 497
+ + K TV K R D +R+ +S ++P
Sbjct: 91 VQDAREMLNSRKQQTTVPQKPRQVAD-AREKISLKRSSP 128
>AB055760-1|BAB33368.2| 424|Homo sapiens KIAA1649 protein protein.
Length = 424
Score = 33.1 bits (72), Expect = 0.77
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +3
Query: 207 GVQQGALKAKPQVMDARNKIISKKRIQITDARDKLAELAKQRDARLKL--EHLKMQRRGQ 380
G+QQG L + + + ++++I ++DAR KL +DAR KL + + + +G+
Sbjct: 38 GIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLG----VKDAREKLLQKDARFRIKGK 93
Query: 381 MTPVNVFPKATKFTRTVVNKDRVFTDTSRQVVSQPLNTP 497
+ + K TV K R D +R+ +S ++P
Sbjct: 94 VQDAREMLNSRKQQTTVPQKPRQVAD-AREKISLKRSSP 131
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,285,517
Number of Sequences: 237096
Number of extensions: 1358824
Number of successful extensions: 6511
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6511
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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