Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d09f
(623 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 2.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 4.2
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 5.6
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 5.6
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 5.6
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 5.6
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 5.6
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 9.8
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.8
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 21 9.8
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 9.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 9.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 9.8
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 336 PEPVIVDEESEIKPDPVIVVDGPEVTPVIIA 428
P P +D E +K D + ++G + PVI +
Sbjct: 1106 PYPWTMDNERYVKVDMYMNLEGEQKDPVIFS 1136
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 4.2
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 453 PVIVAPIEPTPVSPVIIGAPDLPNPQ*VLDNMTT 554
P AP+ P P + G P LPN + M T
Sbjct: 411 PSAGAPMPPIPNMSNMSGMPPLPNMPGSMPTMPT 444
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +2
Query: 143 RAYRRRTCNHQRIRANRQRTRYRRL 217
R YR R+ R + R+R++ R++
Sbjct: 57 RKYRERSKERSRDKRERERSKERKI 81
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +2
Query: 143 RAYRRRTCNHQRIRANRQRTRYRRL 217
R YR R+ R + R+R++ R++
Sbjct: 57 RKYRERSKERSRDKRERERSKERKI 81
Score = 21.0 bits (42), Expect = 9.8
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1
Query: 449 RKNNGGISNDYGRNFRTINNDYGIRFDFAFLIN 351
RK +SN+Y N NND + IN
Sbjct: 79 RKIISSLSNNYISNISNYNNDNNYNKKLYYNIN 111
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 143 RAYRRRTCNHQRIRANRQRTR 205
R YR R+ R R R+R+R
Sbjct: 57 RKYRERSKERSRDRTERERSR 77
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 143 RAYRRRTCNHQRIRANRQRTR 205
R YR R+ R R R+R+R
Sbjct: 57 RKYRERSKERSRDRTERERSR 77
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 143 RAYRRRTCNHQRIRANRQRTR 205
R YR R+ R R R+R+R
Sbjct: 290 RKYRERSKERSRDRTERERSR 310
Score = 21.8 bits (44), Expect = 5.6
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = -1
Query: 452 LRKNNGGISNDYGRNFRTINND 387
+ NN +N+Y N+ NN+
Sbjct: 323 IHNNNNYNNNNYNNNYNNYNNN 344
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 143 RAYRRRTCNHQRIRANRQRTR 205
R YR + R RA R+R+R
Sbjct: 56 RKYRETSKERSRDRAERERSR 76
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +2
Query: 143 RAYRRRTCNHQRIRANRQRTRYRRL 217
R YR + R R R+R++ R++
Sbjct: 290 RKYRETSKERSRDRTERERSKERKI 314
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 21.0 bits (42), Expect = 9.8
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = -2
Query: 202 GPLSIGSNSLMIAGSTSIGSCRMGTGPPKPGVTRPRL 92
G + S + A + G+ + GTG V RP L
Sbjct: 14 GVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPEL 50
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/31 (32%), Positives = 12/31 (38%)
Frame = -2
Query: 193 SIGSNSLMIAGSTSIGSCRMGTGPPKPGVTR 101
S N L S C +GT P P + R
Sbjct: 179 SARENELRALSSLFSKGCLVGTWSPDPAINR 209
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/31 (32%), Positives = 12/31 (38%)
Frame = -2
Query: 193 SIGSNSLMIAGSTSIGSCRMGTGPPKPGVTR 101
S N L S C +GT P P + R
Sbjct: 179 SARENELRALSSLFSKGCLVGTWSPDPAINR 209
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/31 (32%), Positives = 12/31 (38%)
Frame = -2
Query: 193 SIGSNSLMIAGSTSIGSCRMGTGPPKPGVTR 101
S N L S C +GT P P + R
Sbjct: 179 SARENELRALSSLFSKGCLVGTWSPDPAINR 209
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,525
Number of Sequences: 438
Number of extensions: 3500
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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