Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11d08r
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    26   0.34 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   1.8  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   4.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.6  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -2

Query: 589 ETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVL 449
           +  F    +   I  G+A  I +F C  A   SNC+ V +   +L++
Sbjct: 311 QAGFSTKDIGLTINAGLAIFILYFICDEAHYASNCLRVQFQKKLLLV 357


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 110 QSEDDGHQFNGGDHDGDRAD 169
           ++ DD     GG  DGDR D
Sbjct: 86  ENNDDSGGGRGGGRDGDRGD 105


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/36 (30%), Positives = 13/36 (36%)
 Frame = -2

Query: 340 FHVIEHRFSCCGPTGPGSYLSLTLPITCCSTTPCTV 233
           F + E+    C   GPG       P  CC    C V
Sbjct: 35  FAISENAVKPCVSCGPGQSGQCFGPSICCGPFGCLV 70


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 672 HLRWQVSLCWASD 634
           HL W   +CW S+
Sbjct: 753 HLDWNYPVCWQSN 765


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 355 QDQDTFHVIEHRFSCCGPTGPGSYL 281
           Q+  T H + + FSC  P+G   Y+
Sbjct: 232 QNGGTCHDLVNSFSCSCPSGTLGYI 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,354
Number of Sequences: 336
Number of extensions: 3235
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)