Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d08r
(704 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 9e-12
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 68 9e-12
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 63 2e-10
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 56 4e-08
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 53 3e-07
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 52 3e-07
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 50 2e-06
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 45 7e-05
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 40 0.002
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 40 0.003
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 38 0.006
SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_51847| Best HMM Match : Peptidase_S28 (HMM E-Value=2.7e-33) 33 0.23
SB_38920| Best HMM Match : Tetraspannin (HMM E-Value=3.5e-07) 33 0.30
SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73) 30 1.6
SB_52727| Best HMM Match : Plasmodium_HRP (HMM E-Value=2) 30 1.6
SB_48191| Best HMM Match : ROKNT (HMM E-Value=3.6) 30 2.1
SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13) 30 2.1
SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26) 30 2.1
SB_29147| Best HMM Match : TAFH (HMM E-Value=4.1) 29 2.8
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_33044| Best HMM Match : TAFH (HMM E-Value=2.6) 29 4.9
SB_3597| Best HMM Match : TAFH (HMM E-Value=3.8) 29 4.9
SB_47832| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_47703| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 28 8.5
SB_46172| Best HMM Match : Peptidase_C54 (HMM E-Value=1) 28 8.5
SB_26373| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_22822| Best HMM Match : TAFH (HMM E-Value=2.5) 28 8.5
SB_3699| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_54792| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_39659| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-27) 28 8.5
SB_21973| Best HMM Match : XPG_N (HMM E-Value=0.013) 28 8.5
SB_9260| Best HMM Match : EPSP_synthase (HMM E-Value=0) 28 8.5
SB_1915| Best HMM Match : TAFH (HMM E-Value=4.4) 28 8.5
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 67.7 bits (158), Expect = 9e-12
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Frame = -2
Query: 562 ACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAI 383
A +IVGGI F++ F GC GA+RE+ C+L +++ + ++ L+L LGV VFV D V A I
Sbjct: 49 ALIIVGGIMFILGFSGCIGALRENICLLKFFSVVLAIIFFLQLALGVFVFVFQDKVEAVI 108
Query: 382 PNWMNKTFQQDQDTFHV------IEHRFSCCGPTG 296
+ + +D + ++ F CCG G
Sbjct: 109 VEKLQTAVTKYRDNADLQNLIDGVQQEFKCCGAKG 143
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 67.7 bits (158), Expect = 9e-12
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Frame = -2
Query: 595 LSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMV 416
+S F + VG I +IAFFGCCGA +E+ CML+ + I +L+++ L++ V+
Sbjct: 398 ISSNDFMSGSRLLIAVGCIITIIAFFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLG 457
Query: 415 FVNLDGVVAAIPNWMNKTFQQ----DQDTFHVIEHRFSCCGPTGPGSY 284
++N D + + + + + + ++ ++ ++ F CCG GP +
Sbjct: 458 YINKDKIQSDLTDDIIRNIKEYPKNNKAAIDAMQMDFECCGAKGPSDW 505
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Frame = -2
Query: 610 DIETVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLT 431
D + +++ AP+ C+++G + ++AF CCGA++ES CML TY + + L++T
Sbjct: 45 DYSRLTGTINYKTAPILCIVIGIVTVIVAFLACCGALKESQCMLGTYFGLVTAIFCLEVT 104
Query: 430 LGVMVFV-------NLDGVVAAIPNWMNKTFQQDQDTFHVIE-HR-FSCCG 305
V+ +V NL G + + N + + D T + E HR F CCG
Sbjct: 105 AIVLAYVYRERIEKNLHGDIRSTMNEYHLS-GHDAVTRAIDEIHRDFKCCG 154
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/101 (26%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Frame = -2
Query: 595 LSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMV 416
++ ++ P + VG I ++AF GCCGA +E+ CML+ + F+L+L+ L++ G +
Sbjct: 45 IASVNYATGPRVVIAVGFIIALVAFLGCCGAWKENKCMLICFFAFLLLLLILEIVGGALA 104
Query: 415 FVNLDGVVAAIPNWMNKTFQ----QDQDTFHVIEHRFSCCG 305
+ N D + + + K + +++ + + ++ +F CCG
Sbjct: 105 YNNKDKIENRLDKDILKAIENYPGKNEKSINDMQTKFKCCG 145
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 56.8 bits (131), Expect = 2e-08
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Frame = -2
Query: 628 VHLQFADIETVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVL 449
V L+ D L + + + VG +++FFGCCGAI+E C+L T+ + ++
Sbjct: 307 VQLKIGDY-VELQSVKYITGSIIIIAVGAFIALVSFFGCCGAIKEHRCLLATFFALLFII 365
Query: 448 MALKLTLGVMVFVNLDGVVAAIPNWMNKTF--------QQDQDTFHVIEHRFSCCGPTG 296
+A+++T + +V + V + MN T + D + I+ + CCG G
Sbjct: 366 LAVEITGTALGYVYRNKVEEQLGKDMNDTIVSYGEKGKEGITDAYDAIQKKEKCCGING 424
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 55.6 bits (128), Expect = 4e-08
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Frame = -2
Query: 568 PVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVV- 392
P G ++I FFGC GA++E+ L +Y IF+ + + GV+ F+ + +V
Sbjct: 73 PTLLFFTGFSLYLIVFFGCVGALKENTLFLASYGIFIFCCLIPIIAAGVLAFLQREKLVD 132
Query: 391 --AAIPNWMNKTFQQD---QDTFHVIEHRFSCCG 305
A + + + K++QQD Q+ I+ RF CCG
Sbjct: 133 PKARLEDGL-KSYQQDSSKQEFIDFIQTRFKCCG 165
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Frame = -2
Query: 589 ETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFV 410
E++F V ++G + F I FFGC GA+RE+ C L Y + + + L + G + +
Sbjct: 71 ESTFHWPVVIFFVIGILMFFIGFFGCVGALRENTCFLTVYGTSVFLCLILLIACGAVAYT 130
Query: 409 NLDGVVAAIPNWMN--KTFQQD---QDTFHVIEHRFSCCG 305
D V A K + D QD ++ CCG
Sbjct: 131 QKDKVQALKERLKQDLKKYLDDPLNQDLIDFMQTLLKCCG 170
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Frame = -2
Query: 565 VACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAA 386
V +IVG + F+IA GC GA+RE+ +L Y + + + L ++ G V+++ D VVA
Sbjct: 83 VVILIVGILLFLIATVGCIGALRENTILLAIYGGAVTLCLILLVSAGTAVYIHRDKVVAK 142
Query: 385 IPNWMNKTFQQDQDTFHVIEHR----FSCCG 305
+ + + D++ F + R CCG
Sbjct: 143 LKDDLQHYRDPDKENFQFLIDRLQTNLKCCG 173
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 50.0 bits (114), Expect = 2e-06
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Frame = -2
Query: 619 QFADIETVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMAL 440
+F ++ +V T R+ + VG I +++FFGC GA +E+ CML T+ + +L+L+ L
Sbjct: 43 EFIEVSSVPYATGSRLV----IAVGVIIAIVSFFGCLGAWKENRCMLGTFFVLLLILLTL 98
Query: 439 KLTLGVMVF-------VNLDGVVA--AIPNWMNKTFQQD-----QD----TFHVIEHRFS 314
++ V+ + +N D V I + + K + D QD F ++ +
Sbjct: 99 EIAAAVLAYNYRGKNSLNSDSVKVKDEIESDLTKALKGDYGSSGQDGVTKAFDALQEKQK 158
Query: 313 CCGPTGPGSYLSLTLPITCCSTTP--CTVINAYAGCTEVLQAL 191
CCG G + + ST P C V+ A GC + + +
Sbjct: 159 CCGVNGYLDW-KASKKYNGTSTVPDSCCVVKA-DGCGKAVNGI 199
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = -2
Query: 565 VACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAA 386
V +IVG + F+IA GC GA+RE+ +L Y + + + ++ G+ V+++ D VV
Sbjct: 83 VVILIVGILLFLIATVGCIGALRENTILLAIYGGAVTLCLIFLVSAGIAVYMHQDKVVEK 142
Query: 385 IPNWMNKTFQQDQDTFHVIEHR----FSCCG 305
+ + + D++ F + R CCG
Sbjct: 143 LKDDLKHYRDPDKENFQFLIDRLQTNLKCCG 173
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/76 (31%), Positives = 43/76 (56%)
Frame = -2
Query: 628 VHLQFADIETVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVL 449
+ ++ + T L++ +F+ A V + +GG+ FVI FGC GA+RE+ C+L Y ++
Sbjct: 85 IFIEMKEEITKLADLNFQPA-VIFLALGGLLFVITIFGCIGALRENRCLLTAYIWMCGII 143
Query: 448 MALKLTLGVMVFVNLD 401
+A + G + F D
Sbjct: 144 LAGMIVCGGLGFYYKD 159
>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
Length = 187
Score = 44.8 bits (101), Expect = 7e-05
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = -2
Query: 622 LQFADIETVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLV--- 452
+QF+D LS + A + +G + +I F GCCGA++E C+L T +I ++
Sbjct: 58 IQFSDYMK-LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKTVSIKSILYGY 116
Query: 451 LMALKLTLGVMVFVNLDGVVAAI 383
+ A K++L + +++ GV+ +
Sbjct: 117 MYAKKISLTIRIYLQF-GVILGL 138
>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = -2
Query: 562 ACMIVGGIAFV--IAFFGCCGAIRESNCMLVT 473
A ++G AFV + FFGCCGA++ES CML T
Sbjct: 314 AWTMIGAGAFVTFVGFFGCCGAVKESRCMLAT 345
>SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -2
Query: 595 LSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCML 479
L + + + G + +I+FFGCCGAI+ES C+L
Sbjct: 17 LQSVKYATGYIIVIAAGALIALISFFGCCGAIKESRCLL 55
>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
Length = 919
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/64 (23%), Positives = 35/64 (54%)
Frame = -2
Query: 601 TVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGV 422
++LS ++ P + G + ++ GC I+E+ +LV+Y I ++++ L++ GV
Sbjct: 49 SLLSNDNYVTVPGLMIAAGCLVIIVCVVGCVAVIKENRFILVSYLIMLVLIFILEIATGV 108
Query: 421 MVFV 410
+ +
Sbjct: 109 VAVI 112
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = -2
Query: 622 LQFADIETVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVT 473
+QF+D LS + A + +G + +I F GCCGA++E C+L T
Sbjct: 200 IQFSDYMK-LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT 248
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 38.3 bits (85), Expect = 0.006
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -2
Query: 601 TVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLV 476
+++ ++ F A + G + I F GCCGA++E+ C L+
Sbjct: 188 SLMGQSGFTAAANIMIAAGALVMFIGFVGCCGAVKENKCFLL 229
>SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -2
Query: 517 GCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLD 401
G C + + C+L TY FML+L+ ++T+ V + + D
Sbjct: 36 GVCALLYMNPCLLKTYFSFMLILVVAEVTIAVYLLIEKD 74
>SB_51847| Best HMM Match : Peptidase_S28 (HMM E-Value=2.7e-33)
Length = 1224
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = -2
Query: 442 LKLTLGVMVFVNLDGVVAA-IPNWMNKTFQQDQDTFHVIE 326
+K+ +G++VFV + VAA IP + TF+Q D F+ I+
Sbjct: 1 MKIKIGLLVFVGIISFVAAEIPQFKTGTFEQTVDHFNFIQ 40
>SB_38920| Best HMM Match : Tetraspannin (HMM E-Value=3.5e-07)
Length = 219
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -2
Query: 598 VLSETSFRVAPVACMI-VGGIAFVIAFFGCCGAIRESNCMLVTYAI 464
+L ++S+ V V MI +GG+ +I GC G ++E +L+++ I
Sbjct: 17 ILLDSSWFVIIVGLMIGIGGVVVLICTCGCYGTVKEHRYLLISFLI 62
>SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73)
Length = 150
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 565 VACMIVGGIAFVIAFFGCCGAIRES 491
V I G + FVI+F GC GA+RE+
Sbjct: 20 VMLAIAGVLMFVISFSGCLGALREN 44
>SB_52727| Best HMM Match : Plasmodium_HRP (HMM E-Value=2)
Length = 332
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +2
Query: 380 RDSSNYSVE--IHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDASNN 553
R S N V+ +H + +GQ H+ H + +H A +NNE + +
Sbjct: 170 RTSHNEQVKTALHDKSHREGQTALHRTSHSEVQNARHRTCYSKDQDALHRKNNEVQTALH 229
Query: 554 HTGH 565
H H
Sbjct: 230 HAKH 233
>SB_48191| Best HMM Match : ROKNT (HMM E-Value=3.6)
Length = 259
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +2
Query: 323 MLDDMERILVLLEGLVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPD 502
+L+ +R L L+E + + S E + A G + +H+ ED+ D L +
Sbjct: 128 LLEKFQRNLALMEHAAAGQEEPVSASAESNGDQAAGGDQEASEHEMEDKTSDNTRAVLEE 187
Query: 503 GTAASEE 523
G+ E+
Sbjct: 188 GSLNVED 194
>SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13)
Length = 3035
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 407 SRRSSCCYPELDEQDLPA 354
SR+S+CC PE ++DLPA
Sbjct: 2267 SRKSTCCAPEFCKRDLPA 2284
>SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26)
Length = 589
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 365 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHE-DRVGDKHAVALPDGTAASEERNN 532
L+ P + SSN++ + H+ + H H+H+ + V D+ V + DG E+R N
Sbjct: 489 LLTPSKPSSNHNHYHRRRHHHRNYRHNHHHRHQHNEVMDEGKVVINDG-YIDEDREN 544
>SB_29147| Best HMM Match : TAFH (HMM E-Value=4.1)
Length = 249
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = +2
Query: 365 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 544
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 50 LVNGKIETDIYSKPTDKHQHLLFS-SCHPHHTKKAIPYSRAIRIRRICSTEESFNNRCNE 108
Query: 545 SNNHTGHRRYPEAGL*QNGLYVSEL 619
N+ R Y A L + L V+ +
Sbjct: 109 LTNYLLKRGYKPAFLKRQILRVANI 133
>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5834
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -1
Query: 599 RSVRDQLQGSAGGLYDCWRHRIRYCVLRMLRCHQGEQLHACHLRDLHAGVDGTETDLGRN 420
R + + G G DC H + V + C++G + CH+ D GT D N
Sbjct: 200 RGAKCETIGCPGNNVDCSGHGVCLSVTQECDCYRGWKGDGCHVPDCL----GT-PDCNDN 254
Query: 419 GVCE 408
GVC+
Sbjct: 255 GVCD 258
>SB_33044| Best HMM Match : TAFH (HMM E-Value=2.6)
Length = 201
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +2
Query: 365 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 544
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 84 LVNSKIETDLYSKPTDKHQHLLFS-SCHPHHTKKAIPYSLALRIRRICSTEESFNNRCNE 142
Query: 545 SNNHTGHRRYPEAGL*QNGLYVSEL 619
N+ R Y A L + L V+++
Sbjct: 143 LTNYLLKRGYKPAFLKRQILRVADI 167
>SB_3597| Best HMM Match : TAFH (HMM E-Value=3.8)
Length = 283
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +2
Query: 365 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 544
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 84 LVNSKIETDLYSKPTDKHQHLLFS-SCHPHHTKKAIPYSLALRIRRICSTEESFNNRCNE 142
Query: 545 SNNHTGHRRYPEAGL*QNGLYVSEL 619
N+ R Y A L + L V+++
Sbjct: 143 LTNYLLKRGYKPAFLKRQILRVADI 167
>SB_47832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = +2
Query: 365 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 544
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 84 LVNSKIETDLYSKPTDKHQHLLFS-SCHPHHTKKAIPYSLALRIRRICSTEESFNNRCNE 142
Query: 545 SNNHTGHRRYPEAGL*QNGLYVSEL 619
N+ R Y A L + L V+ +
Sbjct: 143 LTNYLLKRGYKPAFLKRQILRVANI 167
>SB_47703| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 640
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = +2
Query: 365 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 544
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 326 LVNSKIETDLYSKPTDKHQHLLFS-SCHPHHTKKAIPYSLALRIRRICSTEESFNNRCNE 384
Query: 545 SNNHTGHRRYPEAGL*QNGLYVSEL 619
N+ R Y A L + L V+ +
Sbjct: 385 LTNYLLKRGYKPAFLKRQILRVANI 409
>SB_46172| Best HMM Match : Peptidase_C54 (HMM E-Value=1)
Length = 417
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = +2
Query: 365 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 544
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 283 LVNSKIETDLYSKPTDKHQHLLFS-SCHPHHTKKAIPYSLALRIRRICSTKESFNNRCNE 341
Query: 545 SNNHTGHRRYPEAGL*QNGLYVSEL 619
N+ R Y A L + L V+ +
Sbjct: 342 LTNYLLKRGYKPAFLKRQILRVANI 366
>SB_26373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 134 FNGGDHDGD-RADSNAIVIEECLQDFGAAGVRVD 232
+N G+ DG R +A+V+ + ++D G VR+D
Sbjct: 142 YNAGEPDGRVRPKLSALVLSQAMRDIGVKFVRID 175
>SB_22822| Best HMM Match : TAFH (HMM E-Value=2.5)
Length = 342
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = +2
Query: 365 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 544
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 143 LVNSKIETDLYSKPTDKHQHLLFS-SCHPHHTKKAIPYSLALRIRRICSTKESFNNRCNE 201
Query: 545 SNNHTGHRRYPEAGL*QNGLYVSEL 619
N+ R Y A L + L V+ +
Sbjct: 202 LTNYLLKRGYKPAFLKRQILRVANI 226
>SB_3699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +2
Query: 35 FSTR*LKLRLIARPPHFVAGVVREAQSEDDGHQFNGGDHDGDRADSNAIVIEECLQDFGA 214
FS+ ++ ++RP HFV +R + D H F G+ E+ ++ A
Sbjct: 406 FSSSNVEFSRVSRPEHFVWRRMRRNKKGSDRHSFVAGETVIQDIHHLERGYEDVVRVLSA 465
Query: 215 AGVRVDYRT 241
G R++ +T
Sbjct: 466 CGARLEKKT 474
>SB_54792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 578
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +3
Query: 231 ITVQGVVEQHVMGRVKDRYEPGPVGPQQLNLCSMTWNVSWS---CWK 362
I Q V QH G+ +Y + + L CS T+ W+ CW+
Sbjct: 82 INSQAHVLQHGAGKTVFKYRRSDIKVELLEGCSYTFKAKWTSRQCWR 128
>SB_39659| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-27)
Length = 334
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Frame = -2
Query: 499 RESNCMLVTYAIFMLVLMALKLTLG---VMVFVNLDGVVA---AIPNWMN--KTFQQDQD 344
+++ + + + F L+A+ TLG M VN+ VV I ++ K ++ Q
Sbjct: 144 KKAIAVCIVFWAFSFFLVAIWYTLGNKIYMFIVNVCIVVLFGITIVSYFKIYKVIKRHQT 203
Query: 343 TFHVIEHRFSCCGPTGPGSY 284
HV+E + CG TG ++
Sbjct: 204 QIHVVESSVTACGETGSNAH 223
>SB_21973| Best HMM Match : XPG_N (HMM E-Value=0.013)
Length = 611
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 134 FNGGDHDGD-RADSNAIVIEECLQDFGAAGVRVD 232
+N G+ DG R +A+V+ + ++D G VR+D
Sbjct: 100 YNAGEPDGRVRPKLSALVLSQAMRDIGVKFVRID 133
>SB_9260| Best HMM Match : EPSP_synthase (HMM E-Value=0)
Length = 465
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +2
Query: 35 FSTR*LKLRLIARPPHFVAGVVREAQSEDDGHQFNGGDHDGDRADSNAIVIEECLQDFGA 214
FS+ ++ ++RP HFV +R + D H F G+ E+ ++ A
Sbjct: 395 FSSSNVEFSRVSRPEHFVWRRMRRNKKGSDRHSFVAGETVIQDIHHLERGYEDVVRVLSA 454
Query: 215 AGVRVDYRT 241
G R++ +T
Sbjct: 455 CGARLEKKT 463
>SB_1915| Best HMM Match : TAFH (HMM E-Value=4.4)
Length = 218
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = +2
Query: 365 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 544
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 84 LVNSKIETDLYSKPTDKHQHLLFS-SCHPHHTKKAIPYSLALRIRRICSTEESFNNRCNE 142
Query: 545 SNNHTGHRRYPEAGL*QNGLYVSEL 619
N+ R Y A L + L V+ +
Sbjct: 143 LTNYLLKRGYKPAFLKRQILRVANI 167
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,810,663
Number of Sequences: 59808
Number of extensions: 432409
Number of successful extensions: 1835
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1817
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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