Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d08f
(605 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 7e-12
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 68 7e-12
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 63 2e-10
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 56 3e-08
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 53 2e-07
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 52 3e-07
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 50 2e-06
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 45 5e-05
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 9e-04
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 40 0.002
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 38 0.005
SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_51847| Best HMM Match : Peptidase_S28 (HMM E-Value=2.7e-33) 33 0.18
SB_38920| Best HMM Match : Tetraspannin (HMM E-Value=3.5e-07) 33 0.24
SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73) 30 1.3
SB_52727| Best HMM Match : Plasmodium_HRP (HMM E-Value=2) 30 1.3
SB_48191| Best HMM Match : ROKNT (HMM E-Value=3.6) 30 1.7
SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13) 30 1.7
SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26) 30 1.7
SB_29147| Best HMM Match : TAFH (HMM E-Value=4.1) 29 2.2
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_33044| Best HMM Match : TAFH (HMM E-Value=2.6) 29 3.9
SB_3597| Best HMM Match : TAFH (HMM E-Value=3.8) 29 3.9
SB_47832| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_47703| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 28 6.7
SB_46172| Best HMM Match : Peptidase_C54 (HMM E-Value=1) 28 6.7
SB_22822| Best HMM Match : TAFH (HMM E-Value=2.5) 28 6.7
SB_54792| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_39659| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-27) 28 6.7
SB_1915| Best HMM Match : TAFH (HMM E-Value=4.4) 28 6.7
SB_19945| Best HMM Match : TAFH (HMM E-Value=2.8) 27 8.9
SB_10831| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_25603| Best HMM Match : Ion_trans_2 (HMM E-Value=4.1e-35) 27 8.9
SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5) 27 8.9
SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 8.9
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 67.7 bits (158), Expect = 7e-12
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Frame = +3
Query: 249 ACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAAI 428
A +IVGGI F++ F GC GA+RE+ C+L +++ + ++ L+L LGV VFV D V A I
Sbjct: 49 ALIIVGGIMFILGFSGCIGALRENICLLKFFSVVLAIIFFLQLALGVFVFVFQDKVEAVI 108
Query: 429 PNWMNKTFQQDQDTFHV------IEHRFSCCGPTG 515
+ + +D + ++ F CCG G
Sbjct: 109 VEKLQTAVTKYRDNADLQNLIDGVQQEFKCCGAKG 143
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 67.7 bits (158), Expect = 7e-12
Identities = 30/108 (27%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Frame = +3
Query: 216 LSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMV 395
+S F + VG I +IAFFGCCGA +E+ CML+ + I +L+++ L++ V+
Sbjct: 398 ISSNDFMSGSRLLIAVGCIITIIAFFGCCGAWKENKCMLILFFILLLIVLGLEIAAAVLG 457
Query: 396 FVNLDGVVAAIPNWMNKTFQQ----DQDTFHVIEHRFSCCGPTGPGSY 527
++N D + + + + + + ++ ++ ++ F CCG GP +
Sbjct: 458 YINKDKIQSDLTDDIIRNIKEYPKNNKAAIDAMQMDFECCGAKGPSDW 505
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Frame = +3
Query: 201 DIETVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLT 380
D + +++ AP+ C+++G + ++AF CCGA++ES CML TY + + L++T
Sbjct: 45 DYSRLTGTINYKTAPILCIVIGIVTVIVAFLACCGALKESQCMLGTYFGLVTAIFCLEVT 104
Query: 381 LGVMVFV-------NLDGVVAAIPNWMNKTFQQDQDTFHVIE-HR-FSCCG 506
V+ +V NL G + + N + + D T + E HR F CCG
Sbjct: 105 AIVLAYVYRERIEKNLHGDIRSTMNEYHLS-GHDAVTRAIDEIHRDFKCCG 154
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/101 (26%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Frame = +3
Query: 216 LSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMV 395
++ ++ P + VG I ++AF GCCGA +E+ CML+ + F+L+L+ L++ G +
Sbjct: 45 IASVNYATGPRVVIAVGFIIALVAFLGCCGAWKENKCMLICFFAFLLLLLILEIVGGALA 104
Query: 396 FVNLDGVVAAIPNWMNKTFQ----QDQDTFHVIEHRFSCCG 506
+ N D + + + K + +++ + + ++ +F CCG
Sbjct: 105 YNNKDKIENRLDKDILKAIENYPGKNEKSINDMQTKFKCCG 145
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Frame = +3
Query: 183 VHLQFADIETVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVL 362
V L+ D L + + + VG +++FFGCCGAI+E C+L T+ + ++
Sbjct: 307 VQLKIGDY-VELQSVKYITGSIIIIAVGAFIALVSFFGCCGAIKEHRCLLATFFALLFII 365
Query: 363 MALKLTLGVMVFVNLDGVVAAIPNWMNKTF--------QQDQDTFHVIEHRFSCCGPTG 515
+A+++T + +V + V + MN T + D + I+ + CCG G
Sbjct: 366 LAVEITGTALGYVYRNKVEEQLGKDMNDTIVSYGEKGKEGITDAYDAIQKKEKCCGING 424
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Frame = +3
Query: 243 PVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVV- 419
P G ++I FFGC GA++E+ L +Y IF+ + + GV+ F+ + +V
Sbjct: 73 PTLLFFTGFSLYLIVFFGCVGALKENTLFLASYGIFIFCCLIPIIAAGVLAFLQREKLVD 132
Query: 420 --AAIPNWMNKTFQQD---QDTFHVIEHRFSCCG 506
A + + + K++QQD Q+ I+ RF CCG
Sbjct: 133 PKARLEDGL-KSYQQDSSKQEFIDFIQTRFKCCG 165
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Frame = +3
Query: 222 ETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFV 401
E++F V ++G + F I FFGC GA+RE+ C L Y + + + L + G + +
Sbjct: 71 ESTFHWPVVIFFVIGILMFFIGFFGCVGALRENTCFLTVYGTSVFLCLILLIACGAVAYT 130
Query: 402 NLDGVVAAIPNWMN--KTFQQD---QDTFHVIEHRFSCCG 506
D V A K + D QD ++ CCG
Sbjct: 131 QKDKVQALKERLKQDLKKYLDDPLNQDLIDFMQTLLKCCG 170
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Frame = +3
Query: 246 VACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAA 425
V +IVG + F+IA GC GA+RE+ +L Y + + + L ++ G V+++ D VVA
Sbjct: 83 VVILIVGILLFLIATVGCIGALRENTILLAIYGGAVTLCLILLVSAGTAVYIHRDKVVAK 142
Query: 426 IPNWMNKTFQQDQDTFHVIEHR----FSCCG 506
+ + + D++ F + R CCG
Sbjct: 143 LKDDLQHYRDPDKENFQFLIDRLQTNLKCCG 173
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/69 (31%), Positives = 42/69 (60%)
Frame = +3
Query: 192 QFADIETVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMAL 371
+F ++ +V T R+ + VG I +++FFGC GA +E+ CML T+ + +L+L+ L
Sbjct: 43 EFIEVSSVPYATGSRLV----IAVGVIIAIVSFFGCLGAWKENRCMLGTFFVLLLILLTL 98
Query: 372 KLTLGVMVF 398
++ V+ +
Sbjct: 99 EIAAAVLAY 107
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Frame = +3
Query: 246 VACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLDGVVAA 425
V +IVG + F+IA GC GA+RE+ +L Y + + + ++ G+ V+++ D VV
Sbjct: 83 VVILIVGILLFLIATVGCIGALRENTILLAIYGGAVTLCLIFLVSAGIAVYMHQDKVVEK 142
Query: 426 IPNWMNKTFQQDQDTFHVIEHR----FSCCG 506
+ + + D++ F + R CCG
Sbjct: 143 LKDDLKHYRDPDKENFQFLIDRLQTNLKCCG 173
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/76 (31%), Positives = 43/76 (56%)
Frame = +3
Query: 183 VHLQFADIETVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVL 362
+ ++ + T L++ +F+ A V + +GG+ FVI FGC GA+RE+ C+L Y ++
Sbjct: 85 IFIEMKEEITKLADLNFQPA-VIFLALGGLLFVITIFGCIGALRENRCLLTAYIWMCGII 143
Query: 363 MALKLTLGVMVFVNLD 410
+A + G + F D
Sbjct: 144 LAGMIVCGGLGFYYKD 159
>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
Length = 187
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +3
Query: 189 LQFADIETVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLV--- 359
+QF+D LS + A + +G + +I F GCCGA++E C+L T +I ++
Sbjct: 58 IQFSDYMK-LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKTVSIKSILYGY 116
Query: 360 LMALKLTLGVMVFVNLDGVVAAI 428
+ A K++L + +++ GV+ +
Sbjct: 117 MYAKKISLTIRIYLQF-GVILGL 138
>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/32 (56%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Frame = +3
Query: 249 ACMIVGGIAFV--IAFFGCCGAIRESNCMLVT 338
A ++G AFV + FFGCCGA++ES CML T
Sbjct: 314 AWTMIGAGAFVTFVGFFGCCGAVKESRCMLAT 345
>SB_23555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 40.7 bits (91), Expect = 9e-04
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 216 LSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCML 332
L + + + G + +I+FFGCCGAI+ES C+L
Sbjct: 17 LQSVKYATGYIIVIAAGALIALISFFGCCGAIKESRCLL 55
>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
Length = 919
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/64 (23%), Positives = 35/64 (54%)
Frame = +3
Query: 210 TVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVTYAIFMLVLMALKLTLGV 389
++LS ++ P + G + ++ GC I+E+ +LV+Y I ++++ L++ GV
Sbjct: 49 SLLSNDNYVTVPGLMIAAGCLVIIVCVVGCVAVIKENRFILVSYLIMLVLIFILEIATGV 108
Query: 390 MVFV 401
+ +
Sbjct: 109 VAVI 112
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 189 LQFADIETVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLVT 338
+QF+D LS + A + +G + +I F GCCGA++E C+L T
Sbjct: 200 IQFSDYMK-LSSHDYATAAYILIGIGFLIAIIGFIGCCGALKEHTCLLKT 248
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 38.3 bits (85), Expect = 0.005
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 210 TVLSETSFRVAPVACMIVGGIAFVIAFFGCCGAIRESNCMLV 335
+++ ++ F A + G + I F GCCGA++E+ C L+
Sbjct: 188 SLMGQSGFTAAANIMIAAGALVMFIGFVGCCGAVKENKCFLL 229
>SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 294 GCCGAIRESNCMLVTYAIFMLVLMALKLTLGVMVFVNLD 410
G C + + C+L TY FML+L+ ++T+ V + + D
Sbjct: 36 GVCALLYMNPCLLKTYFSFMLILVVAEVTIAVYLLIEKD 74
>SB_51847| Best HMM Match : Peptidase_S28 (HMM E-Value=2.7e-33)
Length = 1224
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 369 LKLTLGVMVFVNLDGVVAA-IPNWMNKTFQQDQDTFHVIE 485
+K+ +G++VFV + VAA IP + TF+Q D F+ I+
Sbjct: 1 MKIKIGLLVFVGIISFVAAEIPQFKTGTFEQTVDHFNFIQ 40
>SB_38920| Best HMM Match : Tetraspannin (HMM E-Value=3.5e-07)
Length = 219
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 213 VLSETSFRVAPVACMI-VGGIAFVIAFFGCCGAIRESNCMLVTYAI 347
+L ++S+ V V MI +GG+ +I GC G ++E +L+++ I
Sbjct: 17 ILLDSSWFVIIVGLMIGIGGVVVLICTCGCYGTVKEHRYLLISFLI 62
>SB_36515| Best HMM Match : UPF0126 (HMM E-Value=0.73)
Length = 150
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 246 VACMIVGGIAFVIAFFGCCGAIRES 320
V I G + FVI+F GC GA+RE+
Sbjct: 20 VMLAIAGVLMFVISFSGCLGALREN 44
>SB_52727| Best HMM Match : Plasmodium_HRP (HMM E-Value=2)
Length = 332
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = -1
Query: 431 RDSSNYSVE--IHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDASNN 258
R S N V+ +H + +GQ H+ H + +H A +NNE + +
Sbjct: 170 RTSHNEQVKTALHDKSHREGQTALHRTSHSEVQNARHRTCYSKDQDALHRKNNEVQTALH 229
Query: 257 HTGH 246
H H
Sbjct: 230 HAKH 233
>SB_48191| Best HMM Match : ROKNT (HMM E-Value=3.6)
Length = 259
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = -1
Query: 488 MLDDMERILVLLEGLVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPD 309
+L+ +R L L+E + + S E + A G + +H+ ED+ D L +
Sbjct: 128 LLEKFQRNLALMEHAAAGQEEPVSASAESNGDQAAGGDQEASEHEMEDKTSDNTRAVLEE 187
Query: 308 GTAASEE 288
G+ E+
Sbjct: 188 GSLNVED 194
>SB_39963| Best HMM Match : EGF (HMM E-Value=1.4e-13)
Length = 3035
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2
Query: 404 SRRSSCCYPELDEQDLPA 457
SR+S+CC PE ++DLPA
Sbjct: 2267 SRKSTCCAPEFCKRDLPA 2284
>SB_18386| Best HMM Match : CH (HMM E-Value=2.8e-26)
Length = 589
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -1
Query: 446 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHE-DRVGDKHAVALPDGTAASEERNN 279
L+ P + SSN++ + H+ + H H+H+ + V D+ V + DG E+R N
Sbjct: 489 LLTPSKPSSNHNHYHRRRHHHRNYRHNHHHRHQHNEVMDEGKVVINDG-YIDEDREN 544
>SB_29147| Best HMM Match : TAFH (HMM E-Value=4.1)
Length = 249
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = -1
Query: 446 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 267
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 50 LVNGKIETDIYSKPTDKHQHLLFS-SCHPHHTKKAIPYSRAIRIRRICSTEESFNNRCNE 108
Query: 266 SNNHTGHRRYPEAGL*QNGLYVSEL 192
N+ R Y A L + L V+ +
Sbjct: 109 LTNYLLKRGYKPAFLKRQILRVANI 133
>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5834
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 212 RSVRDQLQGSAGGLYDCWRHRIRYCVLRMLRCHQGEQLHACHLRDLHAGVDGTETDLGRN 391
R + + G G DC H + V + C++G + CH+ D GT D N
Sbjct: 200 RGAKCETIGCPGNNVDCSGHGVCLSVTQECDCYRGWKGDGCHVPDCL----GT-PDCNDN 254
Query: 392 GVCE 403
GVC+
Sbjct: 255 GVCD 258
>SB_33044| Best HMM Match : TAFH (HMM E-Value=2.6)
Length = 201
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = -1
Query: 446 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 267
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 84 LVNSKIETDLYSKPTDKHQHLLFS-SCHPHHTKKAIPYSLALRIRRICSTEESFNNRCNE 142
Query: 266 SNNHTGHRRYPEAGL*QNGLYVSEL 192
N+ R Y A L + L V+++
Sbjct: 143 LTNYLLKRGYKPAFLKRQILRVADI 167
>SB_3597| Best HMM Match : TAFH (HMM E-Value=3.8)
Length = 283
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = -1
Query: 446 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 267
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 84 LVNSKIETDLYSKPTDKHQHLLFS-SCHPHHTKKAIPYSLALRIRRICSTEESFNNRCNE 142
Query: 266 SNNHTGHRRYPEAGL*QNGLYVSEL 192
N+ R Y A L + L V+++
Sbjct: 143 LTNYLLKRGYKPAFLKRQILRVADI 167
>SB_47832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = -1
Query: 446 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 267
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 84 LVNSKIETDLYSKPTDKHQHLLFS-SCHPHHTKKAIPYSLALRIRRICSTEESFNNRCNE 142
Query: 266 SNNHTGHRRYPEAGL*QNGLYVSEL 192
N+ R Y A L + L V+ +
Sbjct: 143 LTNYLLKRGYKPAFLKRQILRVANI 167
>SB_47703| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 640
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = -1
Query: 446 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 267
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 326 LVNSKIETDLYSKPTDKHQHLLFS-SCHPHHTKKAIPYSLALRIRRICSTEESFNNRCNE 384
Query: 266 SNNHTGHRRYPEAGL*QNGLYVSEL 192
N+ R Y A L + L V+ +
Sbjct: 385 LTNYLLKRGYKPAFLKRQILRVANI 409
>SB_46172| Best HMM Match : Peptidase_C54 (HMM E-Value=1)
Length = 417
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = -1
Query: 446 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 267
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 283 LVNSKIETDLYSKPTDKHQHLLFS-SCHPHHTKKAIPYSLALRIRRICSTKESFNNRCNE 341
Query: 266 SNNHTGHRRYPEAGL*QNGLYVSEL 192
N+ R Y A L + L V+ +
Sbjct: 342 LTNYLLKRGYKPAFLKRQILRVANI 366
>SB_22822| Best HMM Match : TAFH (HMM E-Value=2.5)
Length = 342
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = -1
Query: 446 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 267
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 143 LVNSKIETDLYSKPTDKHQHLLFS-SCHPHHTKKAIPYSLALRIRRICSTKESFNNRCNE 201
Query: 266 SNNHTGHRRYPEAGL*QNGLYVSEL 192
N+ R Y A L + L V+ +
Sbjct: 202 LTNYLLKRGYKPAFLKRQILRVANI 226
>SB_54792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 578
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = -2
Query: 580 ITVQGVVEQHVMGRVKDRYEPGPVGPQQLNLCSMTWNVSWS---CWK 449
I Q V QH G+ +Y + + L CS T+ W+ CW+
Sbjct: 82 INSQAHVLQHGAGKTVFKYRRSDIKVELLEGCSYTFKAKWTSRQCWR 128
>SB_39659| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-27)
Length = 334
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Frame = +3
Query: 312 RESNCMLVTYAIFMLVLMALKLTLG---VMVFVNLDGVVA---AIPNWMN--KTFQQDQD 467
+++ + + + F L+A+ TLG M VN+ VV I ++ K ++ Q
Sbjct: 144 KKAIAVCIVFWAFSFFLVAIWYTLGNKIYMFIVNVCIVVLFGITIVSYFKIYKVIKRHQT 203
Query: 468 TFHVIEHRFSCCGPTGPGSY 527
HV+E + CG TG ++
Sbjct: 204 QIHVVESSVTACGETGSNAH 223
>SB_1915| Best HMM Match : TAFH (HMM E-Value=4.4)
Length = 218
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = -1
Query: 446 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 267
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 84 LVNSKIETDLYSKPTDKHQHLLFS-SCHPHHTKKAIPYSLALRIRRICSTEESFNNRCNE 142
Query: 266 SNNHTGHRRYPEAGL*QNGLYVSEL 192
N+ R Y A L + L V+ +
Sbjct: 143 LTNYLLKRGYKPAFLKRQILRVANI 167
>SB_19945| Best HMM Match : TAFH (HMM E-Value=2.8)
Length = 250
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = -1
Query: 446 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 267
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 49 LVNSKIETDLYSKPTDKHQHLLFS-SCHPHHTKKAIPYSLALRVRRICSTEESFNNRCNE 107
Query: 266 SNNHTGHRRYPEAGL*QNGLYVSEL 192
N+ R Y A L + L V+ +
Sbjct: 108 LTNYLLKRGYKPAFLKRQILRVANI 132
>SB_10831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 687
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 230 LQGSAGGLYDCWRHRIRYCVLRMLRCHQGEQ 322
L G GG+ D +R CV R+LR ++G +
Sbjct: 153 LSGIFGGMLDKQAEFVRLCVSRILRLYKGNK 183
>SB_25603| Best HMM Match : Ion_trans_2 (HMM E-Value=4.1e-35)
Length = 587
Score = 27.5 bits (58), Expect = 8.9
Identities = 21/85 (24%), Positives = 35/85 (41%)
Frame = -1
Query: 446 LVHPVRDSSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASEERNNECDA 267
LV+ ++ YS KH + CH H + + A+ + + E NN C+
Sbjct: 84 LVNSKIETDLYSKPTDKHQHLLLS-SCHPHHTKKAIPYSLALRIRRICSTEESFNNRCNE 142
Query: 266 SNNHTGHRRYPEAGL*QNGLYVSEL 192
N+ R Y A L + L V+ +
Sbjct: 143 LTNYLLKRGYKPAFLKRQILRVANI 167
>SB_24336| Best HMM Match : PqiA (HMM E-Value=1.5)
Length = 260
Score = 27.5 bits (58), Expect = 8.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 401 HKHHYAQGQFQCHQHQH 351
H+HH+ QCHQH +
Sbjct: 99 HQHHHQLQYIQCHQHHY 115
>SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1449
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -1
Query: 323 VALPDGTAASEERNNECDASNN--HTGHRRYPE 231
V LP GT + R++ CDA H G +R E
Sbjct: 191 VMLPPGTRVCDSRDDSCDAEKQMLHAGTKRSAE 223
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,371,359
Number of Sequences: 59808
Number of extensions: 424156
Number of successful extensions: 1383
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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