Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11d08f
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    25   2.5  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   5.8  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   5.8  

>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 145 RWQVSLCWASDWRFIYNSL 201
           RWQ+ +CW S   F+  +L
Sbjct: 383 RWQLYMCWVSGSLFVVPAL 401


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -1

Query: 425  SSNYSVEIHKHHYAQGQFQCHQHQHEDRVGDKHAVALPDGTAASE 291
            + NY  + H+    Q Q Q  QH+HE +      +A      AS+
Sbjct: 895  AENYRQQ-HQQQQQQQQQQQQQHEHEQQQQQNSMLATQQRLEASQ 938


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
 Frame = -1

Query: 395 HHYAQGQFQCHQH-QHEDRVGDKHAVALPDGTAASEERNNECDASNNHTG 249
           HH A      H H QH   +     VA     AAS+E+     +S  H G
Sbjct: 865 HHQAAAVAAHHHHLQHHAAM-----VAAAAAAAASQEQQQRSSSSQQHRG 909


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,168
Number of Sequences: 2352
Number of extensions: 14342
Number of successful extensions: 72
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)