Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11d05r
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.5  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   6.0  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    22   6.0  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    22   6.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.0  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   8.0  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   8.0  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   8.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +2

Query: 155 PSQCAATVTIASTSSFCVECAELDMRFDRRS 247
           P  CAA     S  S+ + CAE +M FD  S
Sbjct: 569 PKNCAAYYVCRSGLSYHLSCAE-NMMFDPMS 598



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/62 (19%), Positives = 22/62 (35%)
 Frame = +3

Query: 513  WVMFLETVWREPPEFHWFVPTVRRRFPERLPSVNTATMQ*AAVSTERAVSTEPPQTKLLM 692
            W     T W       W+  T  RR     P+  + T +    +     +T PP   ++ 
Sbjct: 1035 WTTKPSTWWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMP 1094

Query: 693  KI 698
            ++
Sbjct: 1095 EV 1096


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 127 VSWGFPCARGAPD 89
           + W +PC RG  D
Sbjct: 140 LDWEYPCQRGGAD 152


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 33  N*LMFCCSQDRKALTLTNMSGAPRA 107
           N L+  C+QD K     ++SG PRA
Sbjct: 63  NRLVEYCTQDFKKKHKADISGNPRA 87


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 33  N*LMFCCSQDRKALTLTNMSGAPRA 107
           N L+  C+QD K     ++SG PRA
Sbjct: 63  NRLVEYCTQDFKKKHKADISGNPRA 87


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
 Frame = -1

Query: 259 LNVRAP---PVEPHIELCTFHAEGTGTCN 182
           L V AP    +EP ++   F    T TCN
Sbjct: 322 LTVTAPLKAKIEPQVQTIDFGRPATFTCN 350


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 265 WPPGPQSSR 291
           WPP PQ+ R
Sbjct: 342 WPPAPQTDR 350


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 127 VSWGFPCARGAPD 89
           + W +PC RG  D
Sbjct: 141 LDWEYPCQRGGVD 153


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 127 VSWGFPCARGAPD 89
           + W +PC RG  D
Sbjct: 141 LDWEYPCQRGGVD 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,601
Number of Sequences: 336
Number of extensions: 4171
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)