Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d04r
(491 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26 pro... 234 1e-61
CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein. 234 1e-61
BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein. 234 1e-61
AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26 p... 234 1e-61
L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26 pro... 232 6e-61
BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-l... 231 7e-61
BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-l... 231 7e-61
BC108904-1|AAI08905.1| 725|Homo sapiens hyaluronan-mediated mot... 29 8.8
BC070281-1|AAH70281.1| 552|Homo sapiens HMMR protein protein. 29 8.8
BC057235-1|AAH57235.1| 613|Homo sapiens HMMR protein protein. 29 8.8
BC017793-1|AAH17793.1| 331|Homo sapiens Unknown (protein for IM... 29 8.8
BC012151-1|AAH12151.1| 1120|Homo sapiens nuclear transcription f... 29 8.8
BC006984-1|AAH06984.1| 512|Homo sapiens Unknown (protein for IM... 29 8.8
BC006447-1|AAH06447.1| 681|Homo sapiens NFX1 protein protein. 29 8.8
AL356472-7|CAH72747.3| 833|Homo sapiens nuclear transcription f... 29 8.8
AL356472-6|CAH72746.1| 1120|Homo sapiens nuclear transcription f... 29 8.8
AL356472-5|CAH72745.1| 1024|Homo sapiens nuclear transcription f... 29 8.8
AL356218-4|CAI13305.1| 1120|Homo sapiens nuclear transcription f... 29 8.8
AL356218-3|CAI13304.1| 1024|Homo sapiens nuclear transcription f... 29 8.8
AF332009-1|AAK16545.1| 1024|Homo sapiens nuclear transcription f... 29 8.8
AF032862-1|AAC32548.1| 724|Homo sapiens intracellular hyaluroni... 29 8.8
>X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 234 bits (573), Expect = 1e-61
Identities = 110/146 (75%), Positives = 127/146 (86%)
Frame = -3
Query: 441 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 262
MKFN VTS R KNRKRHF APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 261 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 82
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 81 RRAKGRLAALGKDKGKYTEETATAME 4
R+AK R +GK+KGKY EET M+
Sbjct: 121 RKAKSR--QVGKEKGKYKEETIEKMQ 144
>CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein.
Length = 145
Score = 234 bits (573), Expect = 1e-61
Identities = 110/146 (75%), Positives = 127/146 (86%)
Frame = -3
Query: 441 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 262
MKFN VTS R KNRKRHF APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 261 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 82
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 81 RRAKGRLAALGKDKGKYTEETATAME 4
R+AK R +GK+KGKY EET M+
Sbjct: 121 RKAKSR--QVGKEKGKYKEETIEKMQ 144
>BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein.
Length = 145
Score = 234 bits (573), Expect = 1e-61
Identities = 110/146 (75%), Positives = 127/146 (86%)
Frame = -3
Query: 441 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 262
MKFN VTS R KNRKRHF APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 261 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 82
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 81 RRAKGRLAALGKDKGKYTEETATAME 4
R+AK R +GK+KGKY EET M+
Sbjct: 121 RKAKSR--QVGKEKGKYKEETIEKMQ 144
>AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 234 bits (573), Expect = 1e-61
Identities = 110/146 (75%), Positives = 127/146 (86%)
Frame = -3
Query: 441 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 262
MKFN VTS R KNRKRHF APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 261 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 82
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 81 RRAKGRLAALGKDKGKYTEETATAME 4
R+AK R +GK+KGKY EET M+
Sbjct: 121 RKAKSR--QVGKEKGKYKEETIEKMQ 144
>L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 232 bits (567), Expect = 6e-61
Identities = 109/146 (74%), Positives = 126/146 (86%)
Frame = -3
Query: 441 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 262
MKFN VTS R KNRKRHF APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 261 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 82
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 81 RRAKGRLAALGKDKGKYTEETATAME 4
R+AK R +GK+K KY EET M+
Sbjct: 121 RKAKSR--QVGKEKSKYKEETIEKMQ 144
>BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 231 bits (566), Expect = 7e-61
Identities = 108/146 (73%), Positives = 126/146 (86%)
Frame = -3
Query: 441 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 262
MKFN VTS R KNRKRHF APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 261 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 82
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 81 RRAKGRLAALGKDKGKYTEETATAME 4
R+AK R +GK+KGKY EE M+
Sbjct: 121 RKAKSR--QVGKEKGKYKEELIEKMQ 144
>BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 231 bits (566), Expect = 7e-61
Identities = 108/146 (73%), Positives = 126/146 (86%)
Frame = -3
Query: 441 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 262
MKFN VTS R KNRKRHF APSH+RR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 261 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 82
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 81 RRAKGRLAALGKDKGKYTEETATAME 4
R+AK R +GK+KGKY EE M+
Sbjct: 121 RKAKSR--QVGKEKGKYKEELIEKMQ 144
>BC108904-1|AAI08905.1| 725|Homo sapiens hyaluronan-mediated
motility receptor (RHAMM) protein.
Length = 725
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = -3
Query: 342 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 175
LSK++ + NVK + K+ E V R + + MQ ++KF+ +E+ +REK
Sbjct: 283 LSKQV-EDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFI--LEQQEREK 335
>BC070281-1|AAH70281.1| 552|Homo sapiens HMMR protein protein.
Length = 552
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = -3
Query: 342 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 175
LSK++ + NVK + K+ E V R + + MQ ++KF+ +E+ +REK
Sbjct: 267 LSKQV-EDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFI--LEQQEREK 319
>BC057235-1|AAH57235.1| 613|Homo sapiens HMMR protein protein.
Length = 613
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = -3
Query: 342 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 175
LSK++ + NVK + K+ E V R + + MQ ++KF+ +E+ +REK
Sbjct: 267 LSKQV-EDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFI--LEQQEREK 319
>BC017793-1|AAH17793.1| 331|Homo sapiens Unknown (protein for
IMAGE:4698833) protein.
Length = 331
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = -3
Query: 342 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 175
LSK++ + NVK + K+ E V R + + MQ ++KF+ +E+ +REK
Sbjct: 267 LSKQV-EDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFI--LEQQEREK 319
>BC012151-1|AAH12151.1| 1120|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1120
Score = 29.1 bits (62), Expect = 8.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 27 RCIYPCLCQVQPVCPLLCDRGLLCGLY 107
+C C + CPL+C R L CGL+
Sbjct: 698 KCNEICCVDKEHKCPLICGRKLRCGLH 724
>BC006984-1|AAH06984.1| 512|Homo sapiens Unknown (protein for
IMAGE:3997460) protein.
Length = 512
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = -3
Query: 342 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 175
LSK++ + NVK + K+ E V R + + MQ ++KF+ +E+ +REK
Sbjct: 267 LSKQV-EDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFI--LEQQEREK 319
>BC006447-1|AAH06447.1| 681|Homo sapiens NFX1 protein protein.
Length = 681
Score = 29.1 bits (62), Expect = 8.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 27 RCIYPCLCQVQPVCPLLCDRGLLCGLY 107
+C C + CPL+C R L CGL+
Sbjct: 582 KCNEICCVDKEHKCPLICGRKLRCGLH 608
>AL356472-7|CAH72747.3| 833|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 833
Score = 29.1 bits (62), Expect = 8.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 27 RCIYPCLCQVQPVCPLLCDRGLLCGLY 107
+C C + CPL+C R L CGL+
Sbjct: 698 KCNEICCVDKEHKCPLICGRKLRCGLH 724
>AL356472-6|CAH72746.1| 1120|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1120
Score = 29.1 bits (62), Expect = 8.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 27 RCIYPCLCQVQPVCPLLCDRGLLCGLY 107
+C C + CPL+C R L CGL+
Sbjct: 698 KCNEICCVDKEHKCPLICGRKLRCGLH 724
>AL356472-5|CAH72745.1| 1024|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1024
Score = 29.1 bits (62), Expect = 8.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 27 RCIYPCLCQVQPVCPLLCDRGLLCGLY 107
+C C + CPL+C R L CGL+
Sbjct: 698 KCNEICCVDKEHKCPLICGRKLRCGLH 724
>AL356218-4|CAI13305.1| 1120|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1120
Score = 29.1 bits (62), Expect = 8.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 27 RCIYPCLCQVQPVCPLLCDRGLLCGLY 107
+C C + CPL+C R L CGL+
Sbjct: 698 KCNEICCVDKEHKCPLICGRKLRCGLH 724
>AL356218-3|CAI13304.1| 1024|Homo sapiens nuclear transcription
factor, X-box binding 1 protein.
Length = 1024
Score = 29.1 bits (62), Expect = 8.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 27 RCIYPCLCQVQPVCPLLCDRGLLCGLY 107
+C C + CPL+C R L CGL+
Sbjct: 698 KCNEICCVDKEHKCPLICGRKLRCGLH 724
>AF332009-1|AAK16545.1| 1024|Homo sapiens nuclear transcription
factor NFX2 protein.
Length = 1024
Score = 29.1 bits (62), Expect = 8.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 27 RCIYPCLCQVQPVCPLLCDRGLLCGLY 107
+C C + CPL+C R L CGL+
Sbjct: 698 KCNEICCVDKEHKCPLICGRKLRCGLH 724
>AF032862-1|AAC32548.1| 724|Homo sapiens intracellular hyaluronic
acid binding protein protein.
Length = 724
Score = 29.1 bits (62), Expect = 8.8
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = -3
Query: 342 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 175
LSK++ + NVK + K+ E V R + + MQ ++KF+ +E+ +REK
Sbjct: 282 LSKQV-EDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFI--LEQQEREK 334
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,609,945
Number of Sequences: 237096
Number of extensions: 1495319
Number of successful extensions: 3899
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3891
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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