Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d04f
(535 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 227 1e-58
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 187 2e-46
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 165 6e-40
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 152 4e-36
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 142 6e-33
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 136 4e-31
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 134 1e-30
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 128 8e-29
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 124 1e-27
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 105 5e-22
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 105 6e-22
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 100 2e-20
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 99 3e-20
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 97 2e-19
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 93 3e-18
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 90 3e-17
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 88 1e-16
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 85 7e-16
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 85 1e-15
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 84 2e-15
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 73 3e-12
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 72 7e-12
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 71 1e-11
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 68 1e-10
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 61 2e-08
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 58 1e-07
UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6; Euryar... 56 4e-07
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 56 5e-07
UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n... 52 6e-06
UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa... 51 2e-05
UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environment... 42 0.007
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 42 0.009
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 42 0.009
UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25; Bacter... 38 0.19
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 37 0.33
UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome sh... 36 0.44
UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11; Bacter... 34 1.8
UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10; Bacter... 34 2.3
UniRef50_Q286Z2 Cluster: Putative acetyltransferase; n=1; Phage ... 33 3.1
UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61; Bacter... 33 3.1
UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60; Bacter... 33 4.1
UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_Q22V20 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle cr... 32 7.2
UniRef50_A7RUM4 Cluster: Predicted protein; n=1; Nematostella ve... 32 7.2
UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmen... 32 7.2
UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24; ... 32 7.2
UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1; ... 32 9.5
UniRef50_Q1KVT3 Cluster: DNA-directed RNA polymerase; n=1; Scene... 32 9.5
UniRef50_Q4Z6T0 Cluster: Putative uncharacterized protein; n=2; ... 32 9.5
UniRef50_P60628 Cluster: 50S ribosomal protein L24; n=17; Coryne... 32 9.5
UniRef50_Q5QXW9 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 32 9.5
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 227 bits (555), Expect = 1e-58
Identities = 106/137 (77%), Positives = 122/137 (89%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 230
MKFN VTS R KNRKRHF APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 231 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 410
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++KDRK IL+
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120
Query: 411 RRAKGRLAALGKDKGKY 461
R+AK R +GK+KGKY
Sbjct: 121 RKAKSR--QVGKEKGKY 135
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 187 bits (455), Expect = 2e-46
Identities = 91/137 (66%), Positives = 111/137 (81%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 230
MKFN VTS R K HF APSHI R +MSSPLSKELRQK+NV+SMP +KDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPLSKELRQKYNVQSMPTQKDDEVQVVRG 60
Query: 231 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 410
HY+GQQ+GKV+QVYRKK+V+YI++++REKANG T VGIHPSK VI +LK+ +DRK IL+
Sbjct: 61 HYEGQQIGKVVQVYRKKYVIYIKQVEREKANGTTVRVGIHPSKVVITRLKL-EDRKKILE 119
Query: 411 RRAKGRLAALGKDKGKY 461
R+ +GK+KGKY
Sbjct: 120 RK-------VGKEKGKY 129
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 165 bits (401), Expect = 6e-40
Identities = 71/135 (52%), Positives = 108/135 (80%)
Frame = +3
Query: 15 VLSRVVLAKSDRMKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMP 194
+L++++ + +MKFNKQ++S+RRK RK HF AP+ +RR +MSS LSKELR K+ +++P
Sbjct: 18 LLTQIIFSPFSKMKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKLSKELRLKYKTRALP 77
Query: 195 IRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVK 374
+RKDDEV + RGH G++ GKV+++ RK+F +Y+ER+ REKANG + ++GIHPS ++ K
Sbjct: 78 VRKDDEVLICRGHNHGRE-GKVVKINRKRFKIYVERVTREKANGESTFIGIHPSNVILTK 136
Query: 375 LKMNKDRKAILDRRA 419
LK++K+RK ILDR+A
Sbjct: 137 LKIDKNRKKILDRKA 151
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 152 bits (369), Expect = 4e-36
Identities = 74/129 (57%), Positives = 96/129 (74%)
Frame = +3
Query: 60 NKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 239
N + SSRRK+R HF APS RRV++S+PLS ELR K+NV+SMPIRKDDEV VVRG K
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPLSSELRAKYNVRSMPIRKDDEVMVVRGSNK 64
Query: 240 GQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRA 419
G++ GKV VYR K+ +++ERI R+K+NG + + +HPS VI KL ++KDR+AIL+R
Sbjct: 65 GRE-GKVTSVYRLKWAIHVERISRDKSNGQSVPIPLHPSNVVIKKLHLDKDREAILERVG 123
Query: 420 KGRLAALGK 446
KGR A K
Sbjct: 124 KGREAVKAK 132
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 142 bits (343), Expect = 6e-33
Identities = 68/126 (53%), Positives = 95/126 (75%)
Frame = +3
Query: 54 KFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 233
K + V+S RRK RK +F APS RRVL+S+PLSKELR ++ +K++PIR+DDEV VVRG
Sbjct: 3 KQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGS 62
Query: 234 YKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDR 413
KGQ+ GK+ VYR KF V ++++ +EK NGA+ + +HPSK VI KL ++KDRKA++ R
Sbjct: 63 KKGQE-GKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQR 121
Query: 414 RAKGRL 431
+ G+L
Sbjct: 122 KG-GKL 126
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 136 bits (328), Expect = 4e-31
Identities = 66/102 (64%), Positives = 82/102 (80%), Gaps = 2/102 (1%)
Frame = +3
Query: 162 LRQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATA 335
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+QVYRKK+V+YIE +Q+EKANG T
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEKANGTTV 77
Query: 336 YVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 461
+VGIHPSK VI +LK++KDRK I +++AK A GK+KGKY
Sbjct: 78 HVGIHPSKAVITRLKLDKDRKKIPEQKAKSHQA--GKEKGKY 117
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 134 bits (324), Expect = 1e-30
Identities = 64/132 (48%), Positives = 95/132 (71%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 230
MK + +V+S RRK R+ APS++R LMS+ LSK+LR+K+NV+++P+RKDDEV VVRG
Sbjct: 1 MKTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHLSKDLRKKYNVRALPVRKDDEVTVVRG 60
Query: 231 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 410
+KG + GKV VYRK++ + IE++ R KANG + I S+C+I K +N+DRK +L
Sbjct: 61 THKGTK-GKVSSVYRKRWTIQIEKLTRTKANGMPYQIPIRASQCIITKPYLNEDRKQLLA 119
Query: 411 RRAKGRLAALGK 446
R+A +++ GK
Sbjct: 120 RKASAKVSTKGK 131
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 128 bits (309), Expect = 8e-29
Identities = 65/114 (57%), Positives = 88/114 (77%)
Frame = +3
Query: 120 HIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIE 299
H+RR L +P ++++ + P+RKDDEVQVVRG YKG++ GKV+QVYR+++V+++E
Sbjct: 40 HVRRALHRAP--PQVQRPLH----PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVE 92
Query: 300 RIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGKY 461
RI REK NG+T VGIHPSK V+ KLK++KDRKAILDR+A GR A K KGK+
Sbjct: 93 RITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGKF 144
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 124 bits (300), Expect = 1e-27
Identities = 62/126 (49%), Positives = 89/126 (70%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 230
MKFN +V+S+ K RK + AP+ R +LMS+ LSKELR+K+NV ++PI KDDEV++++G
Sbjct: 1 MKFNCKVSSNPSKARKALYTAPASQRAILMSARLSKELREKYNVIAIPIHKDDEVKIIKG 60
Query: 231 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 410
H K GKV V R K+V+ I+++ + KANG T V I PS +I KL +NKDR+A L
Sbjct: 61 HQK--VAGKVTAVRRSKYVINIDKLTKTKANGQTVPVAIRPSNVIITKLFLNKDREAYLA 118
Query: 411 RRAKGR 428
++A+ R
Sbjct: 119 KKAESR 124
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 105 bits (253), Expect = 5e-22
Identities = 55/137 (40%), Positives = 83/137 (60%), Gaps = 3/137 (2%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 230
+K N ++S +K RK F A + +S+ L+KE + VK +PIR+DDEV + G
Sbjct: 2 VKTNPFLSSQAKKTRKAFFNATKDDKHRQLSAKLNKEQAETHGVKQLPIRRDDEVSINSG 61
Query: 231 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILD 410
+ G++ GKV+ V + + ++ REK NG T +V +HPS C+I KLKM+K RK +++
Sbjct: 62 KFAGRE-GKVIAVKLSENRIVVDSFTREKLNGQTVHVSVHPSNCLITKLKMDKQRKELIE 120
Query: 411 RRAKGR---LAALGKDK 452
RR GR LA LG +K
Sbjct: 121 RRRAGREKILAKLGHNK 137
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 105 bits (252), Expect = 6e-22
Identities = 57/105 (54%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
Frame = +3
Query: 21 SRVVLAKSDR---MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSM 191
+RV LA S R MK++ VTSSRRK RK HF APS RR LMS+ LS EL+ + ++
Sbjct: 7 TRVRLAVSLRRHAMKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAALSAELKAQHGANAV 66
Query: 192 PIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 326
PIR +DEV+V RG +K ++ GKV+QVYRKK+V++I I R+K NG
Sbjct: 67 PIRVNDEVRVTRGSFKNRE-GKVVQVYRKKWVIHIANITRDKVNG 110
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 100 bits (240), Expect = 2e-20
Identities = 59/137 (43%), Positives = 83/137 (60%), Gaps = 5/137 (3%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 230
MK N VT+SRRK RK +F A + R +MSS LSKELR + +K+MPIR+ D V++ G
Sbjct: 1 MKLNSAVTASRRKCRKAYFTANAETRAKMMSSRLSKELRAEHKIKTMPIRRGDIVEIFTG 60
Query: 231 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYV--GIHPSKCVIVKLKMNKDRKAI 404
+KG GKV++V R+ + + +E I ++ N V IHPS C+I +L MN R
Sbjct: 61 GHKG--TGKVVEVRRRDYKICVEGINQKARNPEAKPVPYPIHPSNCIIKELYMNGSRYRA 118
Query: 405 LDRRAK---GRLAALGK 446
+ RR + RLA +GK
Sbjct: 119 IKRRQERNAERLARIGK 135
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 99 bits (238), Expect = 3e-20
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 230
MK N +VTSSRRK RK HF APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60
Query: 231 HYKG 242
YKG
Sbjct: 61 SYKG 64
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 97.1 bits (231), Expect = 2e-19
Identities = 48/115 (41%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Frame = +3
Query: 72 TSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 251
+S RK RK F AP H R+ LMS+ L ELR+KFN +S+P+R+ D V+++RG +KG +
Sbjct: 6 SSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHE- 64
Query: 252 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKD-RKAILDR 413
G+V++V K+ +Y+E E+ANG Y IHPS +I++ ++ R+ I++R
Sbjct: 65 GEVVEVDLKRLRIYVEGATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKIIER 119
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 93.5 bits (222), Expect = 3e-18
Identities = 49/125 (39%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
Frame = +3
Query: 72 TSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 251
+S RK K +AP H RR L+++PLSK+L+++ ++ +P+R D V ++RG +KG +
Sbjct: 7 SSQPRKQHKALTKAPWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR- 65
Query: 252 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL-KMNKDRKAILDRRAKGR 428
GKV +V K+ +Y++ +K +G Y IHPSK VIV+L + +K R A +D+ K R
Sbjct: 66 GKVTRVDYKRVRIYVDSASFKKPSGEAVYYPIHPSKVVIVELDQSDKARVAAIDKTRKAR 125
Query: 429 LAALG 443
A G
Sbjct: 126 EAKAG 130
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 90.2 bits (214), Expect = 3e-17
Identities = 47/116 (40%), Positives = 74/116 (63%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 230
M F K + RK RK F AP H+RR +MS+ LSKEL++K ++P+RK D V+++RG
Sbjct: 1 MAFTK--SKQPRKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRG 58
Query: 231 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 398
+KG + G+V++V K++ +Y+E ++ +G IHPS +I+KL +KD K
Sbjct: 59 DFKGLE-GEVIKVDLKRYRIYVEGANNKRQDGREVPYPIHPSNVMIIKL-YDKDEK 112
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 87.8 bits (208), Expect = 1e-16
Identities = 47/131 (35%), Positives = 80/131 (61%), Gaps = 1/131 (0%)
Frame = +3
Query: 69 VTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 248
++S K RK + P+H+R L+++ LS++L +++ +K + IRK D V+++RG G +
Sbjct: 2 ISSKPSKQRKLVYNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE 61
Query: 249 VGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKM-NKDRKAILDRRAKG 425
GKV++V RK+ V IE + ++KA+G YV +H SK +I KL +K+R ++R+ K
Sbjct: 62 -GKVVEVDRKRGRVAIEGLTKKKADGTPVYVWVHASKVIITKLDTGDKERMDAIERKRKM 120
Query: 426 RLAALGKDKGK 458
R K K
Sbjct: 121 REEYFSKKSPK 131
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 85.4 bits (202), Expect = 7e-16
Identities = 46/122 (37%), Positives = 70/122 (57%)
Frame = +3
Query: 63 KQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 242
KQ TSSRRK RK HF +R+ S+ LS+ELR+++ ++ P+R D V V G + G
Sbjct: 6 KQKTSSRRKQRKAHFACNDGEKRIRSSARLSRELRKEYGFRTFPLRTGDTVVVKGGKFDG 65
Query: 243 QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAK 422
++ G + ++ + + VYIE K +G A V I+PSK I K + RK L+R+ +
Sbjct: 66 KE-GVISKINYRDYKVYIEGCFVTKNDGTNALVPIYPSKLTITKFFLENGRKEQLERKKR 124
Query: 423 GR 428
R
Sbjct: 125 AR 126
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 85.0 bits (201), Expect = 1e-15
Identities = 40/62 (64%), Positives = 53/62 (85%)
Frame = +3
Query: 132 VLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQR 311
+LMS+PLS LR K+NV+SMPIRKDDEVQVVRG +KG++ GKV+QVY +K V++++RI
Sbjct: 46 LLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQKRVIHVKRISH 104
Query: 312 EK 317
EK
Sbjct: 105 EK 106
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 83.8 bits (198), Expect = 2e-15
Identities = 49/121 (40%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = +3
Query: 63 KQVTSSRRKNRKRH-FRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 239
K +S K RKR + AP HIR + +PLS EL+QK +K + +RK D V +VRG +K
Sbjct: 3 KGTSSKPGKVRKREVYDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFK 62
Query: 240 GQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRA 419
G + GKV V KK +++E KA+G IHPSK V+ +L ++ R+ L R
Sbjct: 63 GHE-GKVTSVDVKKGRIHVEGATLRKADGTEVPFPIHPSKVVVTELDLSDPRRKELVERK 121
Query: 420 K 422
K
Sbjct: 122 K 122
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 73.3 bits (172), Expect = 3e-12
Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Frame = +3
Query: 144 SPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKAN 323
+PLS EL +++ +K + IRKDD V+V+RG G + GKV QV+ + + IE + R+KA+
Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKKAD 66
Query: 324 GATAYVGIHPSKCVIVKLKMNKD-RKAILDRRA 419
G Y+ IH SK I KL N RK I++R+A
Sbjct: 67 GTPVYIKIHASKVEITKLNTNDPRRKDIINRKA 99
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 72.1 bits (169), Expect = 7e-12
Identities = 41/105 (39%), Positives = 66/105 (62%)
Frame = +3
Query: 84 RKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 263
RK RK AP H RR +M SPLSKELR+K ++++PI+ D V+V RG+++G++ G+V+
Sbjct: 23 RKQRKYIINAPLHRRRKMMRSPLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVI 81
Query: 264 QVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 398
+ K + VY+ + ++ HPSK I+KL ++ D+K
Sbjct: 82 DIDPKYYRVYLS-LDTDR------QYPFHPSKLTIIKLDLS-DKK 118
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 71.3 bits (167), Expect = 1e-11
Identities = 37/109 (33%), Positives = 65/109 (59%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 230
MK+ VT SRRKNRKR F ++ + LSKE+++ K++ ++K+ E++V RG
Sbjct: 1 MKYKHHVTCSRRKNRKRCFLNLKRKNSNIIKTNLSKEMQKYHKKKTLILKKNYEIKVKRG 60
Query: 231 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 377
+KG + GKV+Q+ ++ ++++ I R K +V + PS I+K+
Sbjct: 61 DFKG-KTGKVIQIKPEQQKIFVDNIFRNKFEKTNIFVPLKPSNIQIIKI 108
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 68.1 bits (159), Expect = 1e-10
Identities = 36/113 (31%), Positives = 61/113 (53%)
Frame = +3
Query: 63 KQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 242
+ V+ RK RK + AP HIR+ M + LS+ L +++ +S + D V+++RG +KG
Sbjct: 6 EMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKG 65
Query: 243 QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKA 401
+ GKV V + ++ + K +G I+PS +I KL+M R+A
Sbjct: 66 TE-GKVQSVSLMDGTIAVDGVISTKVDGTEVPRPINPSNVMITKLEMKDGRRA 117
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 60.9 bits (141), Expect = 2e-08
Identities = 39/101 (38%), Positives = 58/101 (57%)
Frame = +3
Query: 75 SSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVG 254
+++ +NR+ ++A + R + + SPLSKELR K+ +S+ + + D V VVRG YK G
Sbjct: 3 ATKMRNRQI-YQASTRTRSMQVGSPLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-G 60
Query: 255 KVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 377
KV V + V IE I++EK G V I SK V+ L
Sbjct: 61 KVSHVDTESGSVAIEGIKKEKGKGDKFDVLIRASKVVVTGL 101
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 58.4 bits (135), Expect = 1e-07
Identities = 32/98 (32%), Positives = 53/98 (54%)
Frame = +3
Query: 84 RKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 263
+ K +RA + + S LSK+L++K+ +S+ + + D V ++RG +KG GKV
Sbjct: 5 KMRNKMIYRASYQTKSKQLGSALSKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVA 63
Query: 264 QVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 377
+V K V IE +++EK G V IH S ++ L
Sbjct: 64 EVSTAKSSVAIEGVKKEKTKGDKFDVFIHTSNLLVTSL 101
>UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 120
Score = 56.4 bits (130), Expect = 4e-07
Identities = 29/104 (27%), Positives = 57/104 (54%)
Frame = +3
Query: 87 KNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 266
K RK RAP H R + + LS +LR+++ +++ + D V+V+RG + G++ G+V+
Sbjct: 7 KQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEE-GEVIN 65
Query: 267 VYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRK 398
V K V+++E + EK +G + S + L + +++
Sbjct: 66 VDLDKAVIHVEDVTLEKTDGEEVPRPLDTSNVRVTDLDLEDEKR 109
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 56.0 bits (129), Expect = 5e-07
Identities = 32/83 (38%), Positives = 47/83 (56%)
Frame = +3
Query: 150 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGA 329
LSK+LR+K+ ++S PI K D V+VV G KG+ GKV +V +V +E I K +G
Sbjct: 9 LSKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEGITIAKIDGK 67
Query: 330 TAYVGIHPSKCVIVKLKMNKDRK 398
GI P K I L +++ +
Sbjct: 68 QKGFGISPEKLQITHLDLSRSER 90
>UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n=2;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L24P - Picrophilus torridus
Length = 154
Score = 52.4 bits (120), Expect = 6e-06
Identities = 29/81 (35%), Positives = 46/81 (56%)
Frame = +3
Query: 150 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGA 329
LSK+LR+K+ ++ P+ K D V+++ G KG+ GKV+ V K V IE + KA+G
Sbjct: 10 LSKDLRKKYGIRRFPVAKGDIVKIISGSRKGEG-GKVVDVDHKTMKVSIEGVTISKADGK 68
Query: 330 TAYVGIHPSKCVIVKLKMNKD 392
I S I KL ++++
Sbjct: 69 QVPFFIDHSNISITKLDLSRN 89
>UniRef50_Q0IQ32 Cluster: Os12g0150000 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0150000 protein -
Oryza sativa subsp. japonica (Rice)
Length = 283
Score = 50.8 bits (116), Expect = 2e-05
Identities = 35/121 (28%), Positives = 58/121 (47%)
Frame = -3
Query: 413 AIEDCFAVFIHLQLDNHTL*RVNADICCCTIGLFSLNPLNVYNKLFTIHLHHFANLLAFV 234
A+ED AV + L+L + L V+ D+ + L + L+V + + LHH L A V
Sbjct: 77 AVEDGLAVLVELELGDDHLGGVDPDVDGGPVHLLPRDALDVDHPPAAVDLHHLP-LAALV 135
Query: 233 VSTYNLNFIVFANRHGFYIEFLS*FLRQGRGHQHSPYM*RSPEMPLPVFPS*GSHLLVEL 54
++L+ +V A+ G + ++ +G GH+ + R E+ LP P H V L
Sbjct: 136 APPHHLHLVVLADGDGADVVLVAELGGEGGGHEDAADGGRRREVRLPALPPGARHAWVAL 195
Query: 53 H 51
H
Sbjct: 196 H 196
>UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environmental
samples|Rep: Ribosomal protein L24 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 145
Score = 42.3 bits (95), Expect = 0.007
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 20/123 (16%)
Frame = +3
Query: 69 VTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY---- 236
V+ K R+ AP H+RR M S L + +++S+ IR D V+V+RG +
Sbjct: 2 VSKKAGKQRQAQTDAPVHVRRKRMRSRLISDEPDLQSIRSVTIRVGDTVEVLRGDFGFPN 61
Query: 237 ------KGQQVGK----------VMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVI 368
+G+++G+ ++ V K VY++ + ++G + IHPS V+
Sbjct: 62 SVKAEARGKRLGQSRGRSGVKSTIVGVDTKSGFVYVDGVTMTTSDGKEEALPIHPSNLVV 121
Query: 369 VKL 377
KL
Sbjct: 122 TKL 124
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 41.9 bits (94), Expect = 0.009
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +3
Query: 51 MKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSP 149
M FN +T NRKRH APSH+RR +MSSP
Sbjct: 97 MNFNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 41.9 bits (94), Expect = 0.009
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +3
Query: 180 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 317
+K IRKDD+V V+ G KG ++GKV++V RKK V +E++ K
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKKDRVLVEKVNVAK 45
>UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25;
Bacteria|Rep: 50S ribosomal protein L24 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 132
Score = 37.5 bits (83), Expect = 0.19
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +3
Query: 114 PSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVY 293
PS IRR L+ P ++ R K M I++ D VQV+ G KG ++G+V++V+ ++ +V
Sbjct: 7 PSQIRR-LVRRPGIRKHRNSLRYK-MRIKQGDTVQVISGDDKG-KIGEVLRVFPERNMVL 63
Query: 294 IERI 305
+E +
Sbjct: 64 VEGV 67
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 36.7 bits (81), Expect = 0.33
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +3
Query: 189 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 305
M ++K D V V G YKG+ VGKV +V KK+ V +E +
Sbjct: 5 MHVKKGDTVLVASGKYKGR-VGKVKEVLPKKYAVIVEGV 42
>UniRef50_Q4S8H7 Cluster: Chromosome 2 SCAF14705, whole genome shotgun
sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
SCAF14705, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2759
Score = 36.3 bits (80), Expect = 0.44
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 504 YLFKRPPWLWQFPRCIYPCLCQVQPVCPLLCDRGLLCG 391
YL P W W FP P L ++Q +CP DR L CG
Sbjct: 2559 YLMNNPSWSWVFP----PDLLRLQRMCPEKMDRFLCCG 2592
>UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11;
Bacteria|Rep: 50S ribosomal protein L24 - Leptospira
interrogans
Length = 119
Score = 34.3 bits (75), Expect = 1.8
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 183 KSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 317
K I+K+DEV + G +KG++ GKV+ + +K+ V +E + + K
Sbjct: 15 KKFRIKKNDEVICITGKHKGKR-GKVLSIDKKRDRVIVEGLNKRK 58
>UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10;
Bacteria|Rep: 50S ribosomal protein L24 - Aquifex
aeolicus
Length = 132
Score = 33.9 bits (74), Expect = 2.3
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +3
Query: 195 IRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYV 341
I+K D V VVRG KG+Q GKV++VY ER++R G YV
Sbjct: 6 IKKGDTVLVVRGKEKGKQ-GKVLKVY--------ERVKRRDKQGNPVYV 45
>UniRef50_Q286Z2 Cluster: Putative acetyltransferase; n=1; Phage
phiV10|Rep: Putative acetyltransferase - Phage phiV10
Length = 338
Score = 33.5 bits (73), Expect = 3.1
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Frame = -3
Query: 401 CFAVF-IHLQLDNHTL*RVNADICCCTIGLFSLNPL--NVYNKL----FTIHLHHFANL- 246
CF VF I+ + N T+ + I CT+G++ ++PL ++ + ++IH F +
Sbjct: 254 CFMVFMINTPVKNKTILHIVKFISPCTLGIYLVHPLIIDILRRFLLDKYSIHPEMFIVIP 313
Query: 245 LAFVVSTYNLNFIVFANRHG 186
L+F+V +L +VF + G
Sbjct: 314 LSFIVFLISLAIVVFLRKFG 333
>UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 2137
Score = 33.5 bits (73), Expect = 3.1
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 174 FNVKSMPIRKDDEVQVVRGHY-KGQQVGKVMQVYRKKFVVYIERIQREKANGATAY 338
+ V MP++ E +++G Y K Q + ++F Y+ER EKA+ A+ Y
Sbjct: 88 YTVNPMPLKPSPEKSLIKGQYHKRMQSFQNATTNSREFASYLERRSPEKAHRASVY 143
>UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61;
Bacteria|Rep: 50S ribosomal protein L24 - Streptomyces
coelicolor
Length = 107
Score = 33.5 bits (73), Expect = 3.1
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 189 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 317
M I+K D VQV+ G KG+Q GKV+ + ++ V +E + R K
Sbjct: 1 MKIKKGDLVQVITGKDKGKQ-GKVIAAFPREDRVLVEGVNRVK 42
>UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60;
Bacteria|Rep: 50S ribosomal protein L24 - Rickettsia
prowazekii
Length = 113
Score = 33.1 bits (72), Expect = 4.1
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +3
Query: 189 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 317
+ ++K DEV ++ G YKG++ GKV++V+ ++ V + + K
Sbjct: 4 LKVKKGDEVVIITGKYKGKK-GKVLKVFPEENTVVVSGVNLVK 45
>UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1;
Schistosoma japonicum|Rep: Putative uncharacterized
protein - Schistosoma japonicum (Blood fluke)
Length = 96
Score = 32.7 bits (71), Expect = 5.4
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -3
Query: 296 NVYNKLFTIHLHHFANLLAFVVSTYNLNFIVF 201
NVY +F +HLH F NLL + Y L+ +VF
Sbjct: 7 NVYILMFFVHLHLFVNLLNSMRGLYFLSVLVF 38
>UniRef50_Q22V20 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 852
Score = 32.7 bits (71), Expect = 5.4
Identities = 22/106 (20%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = +3
Query: 21 SRVVLAKSDRMKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPI- 197
+ ++ M ++Q+ R + R+ + +L + L+++ ++ +
Sbjct: 641 NNMLKGNKQEMYKDQQIEDLRNQIRQERINRTNEQNLILSLKDNVRSLQEQLDISNQRYQ 700
Query: 198 ----RKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKAN 323
R+D EVQ++R Y Q V K++ +K + +ER++ EK N
Sbjct: 701 EEIKRRDQEVQIIRNQY-DQSVEKIL---HQKNAIDVERLENEKYN 742
>UniRef50_UPI0000DB7931 Cluster: PREDICTED: similar to shuttle craft
CG3647-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to shuttle craft CG3647-PA, isoform A
- Apis mellifera
Length = 1087
Score = 32.3 bits (70), Expect = 7.2
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -2
Query: 465 RCIYPCLCQVQPVCPLLCDRGLLCGLYSSST*QSHTLKGECR 340
+C C +++ +CPL+C + L CG + + KG C+
Sbjct: 652 KCNQLCCIEIEHICPLICSKTLSCGRHKC---EQRCHKGRCQ 690
>UniRef50_A7RUM4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 395
Score = 32.3 bits (70), Expect = 7.2
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Frame = +3
Query: 168 QKFNVKSMPIRKD--DEVQVVRGHYKGQ--QVGKVMQVYRKKFVVYIE--RIQREKANGA 329
QKF+ M R+D D + VV K Q ++ + + ++V +E RI +EKA A
Sbjct: 289 QKFD-NDMGERQDEFDALDVVYTEEKKQLQELEERFKTLEAEYVQIVEERRIAKEKAEAA 347
Query: 330 TAYVG--IHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDKGK 458
+ I ++ + + +K RKA+ ++ KG+ GK GK
Sbjct: 348 ERELNLKIRAARLIQAMWRAHKARKALQKKKKKGKKGKKGKKSGK 392
>UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmental
samples|Rep: Ribosomal protein L21E - uncultured
archaeon GZfos17A3
Length = 130
Score = 32.3 bits (70), Expect = 7.2
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +3
Query: 30 VLAKSDRMKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDD 209
+L KS+ + NKQ+ S + RKR + S +R SP+SK ++Q +S+ IR D
Sbjct: 9 ILDKSE-WRQNKQMARSHGE-RKRTRKKLSKPKRARGLSPISKAIQQFEPGESVHIRIDP 66
Query: 210 EVQVVRGHYKGQ-QVGKVMQVYRKKFVVYIERIQREK 317
V H + GKV+ + F+V I +R++
Sbjct: 67 SVHKGMPHQRFHGMTGKVIGERGRAFIVEISDGKRKR 103
>UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24;
n=6; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L24 - Guillardia theta (Cryptomonas phi)
Length = 101
Score = 32.3 bits (70), Expect = 7.2
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +3
Query: 189 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 305
M I++ D+VQV+ G YKG ++ +V++V RK + ++ I
Sbjct: 1 MTIKQGDKVQVIAGSYKG-EITEVLKVIRKSNSLILKNI 38
>UniRef50_A4CYH5 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. WH 7805|Rep: Putative uncharacterized
protein - Synechococcus sp. (strain WH7805)
Length = 260
Score = 31.9 bits (69), Expect = 9.5
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 491 GLHGCGSFLGVFTLVFAKCSQSALCSAIEDCFAVFIHLQLDNHTL 357
GL GCG F FT + K + A S +D F+ F+ L ++ +
Sbjct: 68 GLDGCGKFFRSFTKLHPKSASLAYGSKSKDSFSYFLDFTLSHNLI 112
>UniRef50_Q1KVT3 Cluster: DNA-directed RNA polymerase; n=1;
Scenedesmus obliquus|Rep: DNA-directed RNA polymerase -
Scenedesmus obliquus
Length = 1529
Score = 31.9 bits (69), Expect = 9.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 296 NVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHGFYIE 174
N++N F + L+ F +LAF+ Y ++F F +H F E
Sbjct: 614 NLFNLFFDVSLN-FGKILAFLKLYYEIDFCSFVQKHSFDFE 653
>UniRef50_Q4Z6T0 Cluster: Putative uncharacterized protein; n=2;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 663
Score = 31.9 bits (69), Expect = 9.5
Identities = 24/85 (28%), Positives = 43/85 (50%)
Frame = -3
Query: 449 VFAKCSQSALCSAIEDCFAVFIHLQLDNHTL*RVNADICCCTIGLFSLNPLNVYNKLFTI 270
+F S S +++ I Q++ + L ++N++ TI LF L ++N LF
Sbjct: 572 IFIISSISMFMASLSYIIEQIITEQININILDKINSNTL--TIFLFCNITLGIFNILFQS 629
Query: 269 HLHHFANLLAFVVSTYNLNFIVFAN 195
L+ L F++ Y+L F++FAN
Sbjct: 630 LLYPLV-LAIFILILYSLFFLIFAN 653
>UniRef50_P60628 Cluster: 50S ribosomal protein L24; n=17;
Corynebacterineae|Rep: 50S ribosomal protein L24 -
Mycobacterium bovis
Length = 105
Score = 31.9 bits (69), Expect = 9.5
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 189 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGA 329
M + K D V V+ G KG + GKV+Q Y + V +E + R K + A
Sbjct: 1 MKVHKGDTVLVISGKDKGAK-GKVLQAYPDRNRVLVEGVNRIKKHTA 46
>UniRef50_Q5QXW9 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Idiomarina
loihiensis
Length = 104
Score = 31.9 bits (69), Expect = 9.5
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +3
Query: 195 IRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 305
I++DDEV V+ G KG+Q GKV++V K V +E +
Sbjct: 5 IKRDDEVVVLAGKDKGKQ-GKVLKVLTDKDRVIVEGV 40
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,730,636
Number of Sequences: 1657284
Number of extensions: 10751870
Number of successful extensions: 30353
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 29286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30315
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 33739557507
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -