Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11d04f
         (535 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.55 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.55 
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    24   0.73 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   3.0  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.55
 Identities = 14/60 (23%), Positives = 30/60 (50%)
 Frame = -3

Query: 389 FIHLQLDNHTL*RVNADICCCTIGLFSLNPLNVYNKLFTIHLHHFANLLAFVVSTYNLNF 210
           F   +L+N++L  +N  +    +GL+ LN  + ++   +I      N + F V+ +  +F
Sbjct: 316 FCKKKLENYSLQLINHRVVFTAMGLYVLNMEHFFSVKCSIQSESLLNDILFPVAGFISDF 375


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.6 bits (51), Expect = 0.55
 Identities = 19/88 (21%), Positives = 37/88 (42%)
 Frame = +3

Query: 12  SVLSRVVLAKSDRMKFNKQVTSSRRKNRKRHFRAPSHIRRVLMSSPLSKELRQKFNVKSM 191
           S +S V+  K     F+     S    +  H++   HI R +  S   +   ++   KS+
Sbjct: 542 SHVSAVLTCKVCDQAFSSLKELSNHMVKNSHYK--EHIMRSITESGGRRRQTREKRKKSL 599

Query: 192 PIRKDDEVQVVRGHYKGQQVGKVMQVYR 275
           P+RK  E++  +  +K      ++   R
Sbjct: 600 PVRKLLELERAQHEFKNGDSSSLLDKMR 627


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 363 HTLKGECRHMLLHHWPFLFESS 298
           HT + +C H LL H P L + S
Sbjct: 352 HTPEPDCIHELLGHMPLLADPS 373


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 415 EQRADWLHLAKTRVNTPRKLPQPW 486
           ++ A  +H    R+  P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668



 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 317 GQWCNSICRHSP 352
           G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 415 EQRADWLHLAKTRVNTPRKLPQPW 486
           ++ A  +H    R+  P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668



 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 317 GQWCNSICRHSP 352
           G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 415 EQRADWLHLAKTRVNTPRKLPQPW 486
           ++ A  +H    R+  P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668



 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 317 GQWCNSICRHSP 352
           G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 415 EQRADWLHLAKTRVNTPRKLPQPW 486
           ++ A  +H    R+  P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668



 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 317 GQWCNSICRHSP 352
           G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 78  SRRKNRKRHFRAPSHIRRVL 137
           + RKNR   +R P  +RR++
Sbjct: 82  TNRKNRVLQWREPEELRRLM 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,311
Number of Sequences: 336
Number of extensions: 2749
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)