Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d03r
(739 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g32530.1 68417.m04631 vacuolar ATP synthase, putative / V-ATP... 151 4e-37
At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C su... 150 8e-37
At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipi... 79 2e-15
At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipi... 78 5e-15
At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipi... 78 5e-15
At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipi... 78 5e-15
At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipi... 78 5e-15
At1g04300.1 68414.m00421 meprin and TRAF homology domain-contain... 31 0.80
At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol p... 29 4.3
At1g77980.1 68414.m09087 MADS-box family protein MADS-box protei... 28 5.6
At4g14980.1 68417.m02302 DC1 domain-containing protein contains ... 28 7.4
At3g13672.1 68416.m01723 seven in absentia (SINA) family protein... 28 7.4
At3g02690.1 68416.m00260 integral membrane family protein simila... 28 7.4
At5g10810.1 68418.m01256 enhancer of rudimentary protein, putati... 27 9.8
At2g24610.1 68415.m02940 cyclic nucleotide-regulated ion channel... 27 9.8
At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 27 9.8
>At4g32530.1 68417.m04631 vacuolar ATP synthase, putative /
V-ATPase, putative SP|P23968 Vacuolar ATP synthase 22
kDa proteolipid subunit (EC 3.6.3.14) {Saccharomyces
cerevisiae}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 180
Score = 151 bits (367), Expect = 4e-37
Identities = 82/170 (48%), Positives = 108/170 (63%)
Frame = -1
Query: 652 GEQISLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNL 473
G S G L SPY + +GIA S+ +SV+GAA GI+ TG S++G ++APRI +KNL
Sbjct: 8 GHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNL 67
Query: 472 ISVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLF 293
ISVIFCEAVAIYG+I AI+L LE S P +S ++ AGY +F +G+ VG NL
Sbjct: 68 ISVIFCEAVAIYGVIVAIILQTKLE--SVP-SSKMYDAESLRAGYAIFASGIIVGFANLV 124
Query: 292 CXXXXXXXXXXXXXXXXXXXXLFVKILIVEIFGSAIGLFGLIVGIYMTSK 143
C LFVKIL++EIFGSA+GLFG+IVGI M+++
Sbjct: 125 CGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQ 174
>At2g25610.1 68415.m03068 H+-transporting two-sector ATPase, C
subunit family protein similar to SP|P23968 Vacuolar ATP
synthase 22 kDa proteolipid subunit (EC 3.6.3.14)
{Saccharomyces cerevisiae}; contains Pfam profile
PF00137: ATP synthase subunit C
Length = 178
Score = 150 bits (364), Expect = 8e-37
Identities = 81/166 (48%), Positives = 107/166 (64%)
Frame = -1
Query: 640 SLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVI 461
S G L SPY + +GIA S+ +SV+GAA GI+ TG S++G ++APRI +KNLISVI
Sbjct: 10 SWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRITSKNLISVI 69
Query: 460 FCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXX 281
FCEAVAIYG+I AI+L LE S P +S ++ AGY +F +G+ VG NL C
Sbjct: 70 FCEAVAIYGVIVAIILQTKLE--SVP-SSKMYDAESLRAGYAIFASGIIVGFANLVCGLC 126
Query: 280 XXXXXXXXXXXXXXXXXLFVKILIVEIFGSAIGLFGLIVGIYMTSK 143
LFVKIL++EIFGSA+GLFG+IVGI M+++
Sbjct: 127 VGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQ 172
>At1g75630.1 68414.m08787 vacuolar ATP synthase 16 kDa proteolipid
subunit 4 / V-ATPase 16 kDa proteolipid subunit 4
(AVAP4) (AVA-P4) identical to SP|P59229 Vacuolar ATP
synthase 16 kDa proteolipid subunit 4 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 4) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 166
Score = 79.4 bits (187), Expect = 2e-15
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 2/168 (1%)
Frame = -1
Query: 640 SLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVI 461
S G+ + T+P+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+
Sbjct: 3 SSGFSGDETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 61
Query: 460 FCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNW--MAGYVMFGAGLAVGLVNLFCX 287
+ IYGLI A+++S T ++ K +++ GY +GLA GL L
Sbjct: 62 MAGVLGIYGLIIAVIIS----------TGINPKAKSYYLFDGYAHLSSGLACGLAGLSAG 111
Query: 286 XXXXXXXXXXXXXXXXXXXLFVKILIVEIFGSAIGLFGLIVGIYMTSK 143
LFV ++++ IF A+ L+GLIVGI ++S+
Sbjct: 112 MAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 159
>At4g38920.1 68417.m05515 vacuolar ATP synthase 16 kDa proteolipid
subunit 3 / V-ATPase 16 kDa proteolipid subunit 3
(AVAP3) (AVA-P3) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 78.2 bits (184), Expect = 5e-15
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Frame = -1
Query: 622 ENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 443
+ T+P+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 7 DETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 65
Query: 442 IYGLITAIVLSGMLEKYSEPFTSVSVKQQNW--MAGYVMFGAGLAVGLVNLFCXXXXXXX 269
IYGLI A+++S T ++ K +++ GY +GLA GL L
Sbjct: 66 IYGLIIAVIIS----------TGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIV 115
Query: 268 XXXXXXXXXXXXXLFVKILIVEIFGSAIGLFGLIVGIYMTSK 143
LFV ++++ IF A+ L+GLIVGI ++S+
Sbjct: 116 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 157
>At4g34720.1 68417.m04928 vacuolar ATP synthase 16 kDa proteolipid
subunit 1 / V-ATPase 16 kDa proteolipid subunit 1
(AVAP1) (AVA-P1) identical to SP|P59227 Vacuolar ATP
synthase 16 kDa proteolipid subunit 1/3/5 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 1/3/5) {Arabidopsis
thaliana}; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 78.2 bits (184), Expect = 5e-15
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Frame = -1
Query: 622 ENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 443
+ T+P+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 7 DETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 65
Query: 442 IYGLITAIVLSGMLEKYSEPFTSVSVKQQNW--MAGYVMFGAGLAVGLVNLFCXXXXXXX 269
IYGLI A+++S T ++ K +++ GY +GLA GL L
Sbjct: 66 IYGLIIAVIIS----------TGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIV 115
Query: 268 XXXXXXXXXXXXXLFVKILIVEIFGSAIGLFGLIVGIYMTSK 143
LFV ++++ IF A+ L+GLIVGI ++S+
Sbjct: 116 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 157
>At2g16510.1 68415.m01893 vacuolar ATP synthase 16 kDa proteolipid
subunit 5 / V-ATPase 16 kDa proteolipid subunit 5
(AVAP5) identical to SP|P59227 Vacuolar ATP synthase 16
kDa proteolipid subunit 1/3/5 (EC 3.6.3.14) (V-ATPase 16
kDa proteolipid subunit 1/3/5) {Arabidopsis thaliana}
GI:926929; contains Pfam profile PF00137: ATP synthase
subunit C
Length = 164
Score = 78.2 bits (184), Expect = 5e-15
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Frame = -1
Query: 622 ENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 443
+ T+P+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 7 DETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 65
Query: 442 IYGLITAIVLSGMLEKYSEPFTSVSVKQQNW--MAGYVMFGAGLAVGLVNLFCXXXXXXX 269
IYGLI A+++S T ++ K +++ GY +GLA GL L
Sbjct: 66 IYGLIIAVIIS----------TGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIV 115
Query: 268 XXXXXXXXXXXXXLFVKILIVEIFGSAIGLFGLIVGIYMTSK 143
LFV ++++ IF A+ L+GLIVGI ++S+
Sbjct: 116 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 157
>At1g19910.1 68414.m02496 vacuolar ATP synthase 16 kDa proteolipid
subunit 2 / V-ATPase 16 kDa proteolipid subunit 2
(AVAP2) (AVA-P2) identical to SP|Q39039 Vacuolar ATP
synthase 16 kDa proteolipid subunit 2 (EC 3.6.3.14)
(V-ATPase 16 kDa proteolipid subunit 2 {Arabidopsis
thaliana}, nearly identical to vacuolar H+-ATPase
proteolipid (16 kDa) subunit GI:755147 from [Gossypium
hirsutum]
Length = 165
Score = 78.2 bits (184), Expect = 5e-15
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Frame = -1
Query: 622 ENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 443
+ T+P+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 8 DETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 66
Query: 442 IYGLITAIVLSGMLEKYSEPFTSVSVKQQNW--MAGYVMFGAGLAVGLVNLFCXXXXXXX 269
IYGLI A+++S T ++ K +++ GY +GLA GL L
Sbjct: 67 IYGLIIAVIIS----------TGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIV 116
Query: 268 XXXXXXXXXXXXXLFVKILIVEIFGSAIGLFGLIVGIYMTSK 143
LFV ++++ IF A+ L+GLIVGI ++S+
Sbjct: 117 GDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSR 158
>At1g04300.1 68414.m00421 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471;contains Pfam PF00917: Meprin And
TRAF-Homology (MATH) domain
Length = 1052
Score = 31.1 bits (67), Expect = 0.80
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +2
Query: 419 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGT 598
D SD + + DG A+ IL D D+SS DT +++ H S G G+G S T
Sbjct: 490 DVSDISDSVDGSAD-----ILQPDLEDRDSSSVLWDTDALEIHPPSSEGSSRGRGISIST 544
Query: 599 PH 604
P+
Sbjct: 545 PN 546
>At3g19390.1 68416.m02459 cysteine proteinase, putative / thiol
protease, putative contains similarity to cysteine
proteinase RD21A (thiol protease) GI:435619, SP:P43297
from [Arabidopsis thaliana]
Length = 452
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/24 (41%), Positives = 11/24 (45%), Gaps = 2/24 (8%)
Frame = -3
Query: 305 GESILWNCCWYRGLWCCSSG--CC 240
G+ W CC Y CC G CC
Sbjct: 383 GKCYSWGCCPYESATCCDDGSSCC 406
>At1g77980.1 68414.m09087 MADS-box family protein MADS-box protein
AGL66
Length = 332
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 488 DSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGTPHIRGSVLQEPSQTY 643
++ FD S+H A ++ S + Q N G+S + H G + QE +Q Y
Sbjct: 224 EAHLFDASAHSAMYETLLQGSSSSSNQNNIMGESNVSNH-NGDMFQEWAQAY 274
>At4g14980.1 68417.m02302 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 470
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 548 HGHPHYWCQHSGRRCQS 498
H HP YW S +RCQ+
Sbjct: 308 HPHPLYWTLESSKRCQA 324
>At3g13672.1 68416.m01723 seven in absentia (SINA) family protein
low similarity to SP|P21461 Developmental protein seven
in absentia {Drosophila melanogaster}; contains Pfam
profile PF03145: Seven in absentia protein family
Length = 216
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -3
Query: 614 FPVYVGYPRNRLFRCPVRCRSSHGHPHYWCQHSGRRCQST 495
FPV+ + ++ CP + Y C HSG +C T
Sbjct: 20 FPVHTNQISSAIYECPNDHIENPKKKPYNCPHSGAKCDVT 59
>At3g02690.1 68416.m00260 integral membrane family protein similar
to PecM protein (GI:5852331) {Vogesella indigofera} and
PecM protein (SP:P42194) [Erwinia chrysanthemi]
Length = 417
Score = 27.9 bits (59), Expect = 7.4
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 9/131 (6%)
Frame = -1
Query: 667 VLNGKGEQISLGWFLENTSPYMWGTLGIAFSVALSVVG----AAMGIHTTGVSIVGGGVK 500
+L+G GE L W + + + WGT +A L + G AA + G+ +V V
Sbjct: 114 ILSG-GEGTFLEWTVLISPFFFWGTAMVAMKEVLPITGPFFVAAFRLIPAGLLLVAFAVY 172
Query: 499 APRIKTKNLISVIFCEAVAIYGLITAIVLSGM----LEKYSEPFTSVSVKQQN-WMAGYV 335
R + I+ F ++A++ L+ A G L++ S SV + Q +A
Sbjct: 173 KGRPLPEG-INAWF--SIALFALVDATCFQGFLAQGLQRTSAGLGSVIIDSQPLTVAVLA 229
Query: 334 MFGAGLAVGLV 302
F G ++G+V
Sbjct: 230 SFLFGESIGIV 240
>At5g10810.1 68418.m01256 enhancer of rudimentary protein, putative
identical to enhancer of rudimentary homolog SP:Q96319
from [Arabidopsis thaliana]; contains Pfam profile:
PF01133 enhancer of rudimentary
Length = 109
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 326 AEHHVSRHPVLLLDGHTSKWFRIFLQHTREHDSSDQTVNG 445
A H+ SRH ++LL S+ R F+ ++DS Q ++G
Sbjct: 2 ANHNSSRHTIILLQNSPSRATRTFM----DYDSIGQAMDG 37
>At2g24610.1 68415.m02940 cyclic nucleotide-regulated ion channel,
putative (CNGC14) similar to cyclic nucleotide and
calmodulin-regulated ion channel (GI:4581205)
[Arabidopsis thaliana]
Length = 726
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = -1
Query: 478 NLISVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNW 350
+++ +F VAI+GL+ +L G ++ Y + S++V+ + W
Sbjct: 373 SVLETMFAILVAIFGLVLFALLIGNMQTYLQ---SITVRLEEW 412
>At1g55420.1 68414.m06339 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 725
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +2
Query: 395 FLQHTREHDSSDQTVNGD-GLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQG 571
+L + D D + D G +EDDG+ S S D D+G G
Sbjct: 124 YLGDVSDDDGEDSHSDHDLGASEDDGEDSHSDHDLGASDDDGEDSHSDHDLGARDDDGNG 183
Query: 572 NGKGD 586
NG GD
Sbjct: 184 NGAGD 188
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,624,029
Number of Sequences: 28952
Number of extensions: 335953
Number of successful extensions: 1297
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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