Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d03f
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0664 + 24122958-24123070,24123184-24123261,24125040-241252... 120 1e-27
12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006 62 5e-10
05_01_0043 - 295041-295173,296252-296537,296616-296697 62 5e-10
02_04_0181 - 20705307-20705439,20705991-20706037,20706181-207062... 62 5e-10
11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538 61 7e-10
01_07_0267 + 42410174-42410252,42410679-42411097 56 2e-08
01_06_1023 + 33890733-33891034,33891171-33891258,33894253-338945... 32 0.46
06_03_0377 - 20068716-20069190,20069205-20069413 31 1.1
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464... 31 1.1
03_02_0596 + 9714022-9714065,9714799-9714868,9714978-9715883,971... 30 1.4
01_02_0040 - 10496431-10496463,10497278-10498708 30 1.9
12_02_0972 + 24956974-24957447 29 3.3
11_01_0559 - 4406815-4406922,4408954-4409042,4409177-4409270,440... 29 3.3
05_04_0172 + 18718661-18718930,18719410-18720252,18720326-187203... 29 3.3
02_02_0335 + 9063749-9064216,9064846-9064890,9065351-9065470,906... 29 4.3
09_04_0151 - 15154063-15154296,15155616-15155660,15155749-151558... 28 5.7
06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881 28 5.7
05_01_0423 + 3322335-3322385,3322618-3323532,3323636-3323878 28 5.7
03_05_0819 + 27948797-27948956,27948976-27949202 28 5.7
07_03_1616 - 28167872-28168303 28 7.5
04_04_0819 - 28312667-28313219,28315157-28316430 28 7.5
04_04_0197 + 23499527-23500603 28 7.5
10_08_0288 + 16527666-16527837,16527915-16528132,16528491-165285... 27 9.9
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 27 9.9
07_01_1035 + 8998266-8998349,8999394-8999441,8999714-8999792,899... 27 9.9
04_04_1538 + 34239913-34241274,34241468-34241578 27 9.9
04_04_0481 - 25541355-25541849,25541933-25542535,25542730-255428... 27 9.9
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 27 9.9
>01_05_0664 +
24122958-24123070,24123184-24123261,24125040-24125210,
24125288-24125456
Length = 176
Score = 120 bits (288), Expect = 1e-27
Identities = 66/142 (46%), Positives = 85/142 (59%)
Frame = +1
Query: 214 LENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAV 393
L SPY + +GIA S+ +SV+GAA GI TG S++G +KAPRI +KNLISVIFCEAV
Sbjct: 12 LVQISPYTFSAIGIAVSIGVSVLGAAWGIFITGSSLIGAAIKAPRITSKNLISVIFCEAV 71
Query: 394 AIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLVNLFCXXXXXXXX 573
AIYG+I AI+L LE S P T++ ++ AGY +F +GL VG NL C
Sbjct: 72 AIYGVIVAIILQTKLE--SVP-TALVHHPESLRAGYAIFASGLIVGFANLVCGVCVGIIG 128
Query: 574 XXXXXXXXXXXXXFVXILIVEI 639
FV IL++EI
Sbjct: 129 SSCALSDAQNSSLFVKILVIEI 150
>12_01_0443 - 3498848-3498980,3500504-3500789,3500928-3501006
Length = 165
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Frame = +1
Query: 217 ENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 396
+ T+P+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 8 DETAPF-FGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 66
Query: 397 IYGLITAIVLSGMLEKYSEP---FTSVSVKQQNWMAGYVMFGAGLAVGLV 537
IYGLI A+++S + ++P F + G AG+A+G+V
Sbjct: 67 IYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIV 116
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +1
Query: 250 GIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLS 429
G+A +A G A+GI G + V + P++ ++ +IF EA+A+YGLI I+LS
Sbjct: 99 GLACGLAGLAAGMAIGI--VGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILS 156
>05_01_0043 - 295041-295173,296252-296537,296616-296697
Length = 166
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Frame = +1
Query: 217 ENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 396
+ T+P+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 9 DETAPF-FGFLGAASALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 67
Query: 397 IYGLITAIVLSGMLEKYSEP---FTSVSVKQQNWMAGYVMFGAGLAVGLV 537
IYGLI A+++S + ++P F + G AG+A+G+V
Sbjct: 68 IYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIV 117
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +1
Query: 250 GIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLS 429
G+A +A G A+GI G + V + P++ ++ +IF EA+A+YGLI I+LS
Sbjct: 100 GLACGLAGLAAGMAIGI--VGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILS 157
>02_04_0181 -
20705307-20705439,20705991-20706037,20706181-20706229,
20706685-20707055
Length = 199
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Frame = +1
Query: 217 ENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 396
+ T+P+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 10 DETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 68
Query: 397 IYGLITAIVLSGMLEKYSEP---FTSVSVKQQNWMAGYVMFGAGLAVGLV 537
IYGLI A+++S + ++P F + G AG+A+G+V
Sbjct: 69 IYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIV 118
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 343 PRIKTKNLISVIFCEAVAIYGLITAIVLS 429
P++ ++ +IF EA+A+YGLI I+LS
Sbjct: 162 PKLFVGMILILIFAEALALYGLIVGIILS 190
>11_01_0440 - 3358786-3358918,3359861-3360146,3360460-3360538
Length = 165
Score = 61.3 bits (142), Expect = 7e-10
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Frame = +1
Query: 217 ENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVA 396
+ T+P+ +G LG A ++ S +GAA G +GV + GV P + K+++ V+ +
Sbjct: 8 DETAPF-FGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLG 66
Query: 397 IYGLITAIVLSGMLEKYSEP---FTSVSVKQQNWMAGYVMFGAGLAVGLV 537
IYGLI A+++S + ++P F + G AG+A+G+V
Sbjct: 67 IYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIV 116
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +1
Query: 250 GIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLS 429
G+A +A G A+GI G + V + P++ ++ +IF EA+A+YGLI I+LS
Sbjct: 99 GLACGLAGLAAGMAIGI--VGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILS 156
>01_07_0267 + 42410174-42410252,42410679-42411097
Length = 165
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Frame = +1
Query: 226 SPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYG 405
+P++ G +G A ++ S +GAA G +GV + GV P + K+++ V+ + IYG
Sbjct: 11 APFL-GFIGAALALVFSCMGAAYGTARSGVGVAHMGVMRPELVMKSIVPVVMAGVLGIYG 69
Query: 406 LITAIVLSGMLEKYSEPFTSV--SVKQQNWMA-GYVMFGAGLAVGLV 537
LI A++++ + + P+ SV +A G AGLA+G+V
Sbjct: 70 LIIAVIITTGINPTAMPYYHFDGSVHLAAGLATGLCALAAGLAIGVV 116
>01_06_1023 +
33890733-33891034,33891171-33891258,33894253-33894522,
33894616-33894724,33894833-33894950,33895051-33895183,
33895306-33895493,33895566-33895752,33895797-33895841,
33895850-33895917,33896093-33896186,33896284-33896475,
33896656-33896736,33897363-33897425
Length = 645
Score = 31.9 bits (69), Expect = 0.46
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 236 CGVPSESPFPLPCPLSEQPWAS 301
CGVP ES FP+P ++PW S
Sbjct: 421 CGVPYESYFPMPASGRDKPWYS 442
>06_03_0377 - 20068716-20069190,20069205-20069413
Length = 227
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 480 LLDGHTSKWFRIFLQHTREHDSSDQTVNGDGLAEDDGDQI 361
++ G+TS W + E DS T G+G AE +GD++
Sbjct: 45 MMTGNTSSWQE---RRPEEGDSDGVTFQGEGAAEGEGDEV 81
>02_05_0844 -
32144417-32144764,32145588-32145686,32146218-32146410,
32147049-32147107,32147189-32147263,32147557-32147670,
32147776-32147895,32148204-32148216,32148421-32148512,
32149078-32149164,32149254-32149328,32149630-32149680,
32149852-32149947,32150135-32150221,32150312-32150368,
32150475-32150600,32150709-32150949,32151028-32151114,
32151260-32151637,32152847-32153187
Length = 912
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = -3
Query: 465 TSKWFRIFLQHTREHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGC 286
TSK RI E + V+ D D+ + + S + Y SS D+ G
Sbjct: 4 TSKCNRISRVADEEEEEEIVAVSSDA---DESESESEVGSGAEEEDDDYVGESS-DSAGG 59
Query: 285 SDNGQGNGKGDSEG 244
S +G G+G GD EG
Sbjct: 60 SGSGSGDGDGDEEG 73
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = -3
Query: 420 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKG 256
+S ++ G G E+D D + + S D + G SD G G G+G
Sbjct: 31 ESESESEVGSGAEEEDDDYVGESSDSAGGSGSGSGDGDGDEEGGRSDIGDGEGEG 85
>03_02_0596 +
9714022-9714065,9714799-9714868,9714978-9715883,
9715973-9716146,9716260-9716373,9716975-9717033,
9717170-9717236,9717305-9717356,9718070-9718488,
9718786-9718847,9719305-9719374,9719730-9719831,
9719933-9720063,9720492-9720606,9720792-9720827
Length = 806
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = -3
Query: 438 QHTREHDSSDQTVNGDGLAEDDGD-----QILSLDSRCFDTSSHYADTSSVDAHGCSDNG 274
++++E D ++Q+ +G A+D D + L +S S A + GCS+
Sbjct: 118 ENSKEIDGNNQSQEANGEADDINDVSANSENLKQESIANSVESDKAPEELKEVSGCSEEL 177
Query: 273 QGNGKGDSEGTPHIRGSV 220
+ GDSEG G++
Sbjct: 178 LNDENGDSEGLKDSHGAL 195
>01_02_0040 - 10496431-10496463,10497278-10498708
Length = 487
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 315 DTSSVDAHGCSDNGQGNGKGDSEG 244
D ++ A G ++NG GNGKG+ G
Sbjct: 9 DAAAAAAAGAAENGYGNGKGNGNG 32
>12_02_0972 + 24956974-24957447
Length = 157
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 273 QGNGKGDSEGTPHIRGSVLQEPSQTYLLTLSIEDVVQ 163
+G GKG EG P G V + PS + E+ V+
Sbjct: 105 KGKGKGKHEGVPTANGGVGESPSSSVAAAAGSEEEVE 141
>11_01_0559 -
4406815-4406922,4408954-4409042,4409177-4409270,
4409344-4409481,4409570-4409727,4409826-4409916,
4410003-4411637
Length = 770
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = -3
Query: 432 TREHDSSDQ----TVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQG 268
TREHD + V+GD AE+DGD+ + S D D + SD+ +G
Sbjct: 2 TREHDGDGEEVATAVHGDAGAEEDGDRNVVDKSEFSDAVHVVVDRDDEEPEFPSDDDEG 60
>05_04_0172 +
18718661-18718930,18719410-18720252,18720326-18720354,
18720439-18720529,18720625-18720779,18721552-18721662,
18722579-18722645
Length = 521
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 330 SSHYADTSSVDAHGCSDNGQGNGKGDSEGTPHIRGSVLQEPSQT 199
SS + ++S A G + +GNGKG G RG + + PS +
Sbjct: 14 SSSSSASASASASGGDEASKGNGKGQRRGRGRGRGLLQRLPSSS 57
>02_02_0335 +
9063749-9064216,9064846-9064890,9065351-9065470,
9066025-9067527
Length = 711
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -3
Query: 387 LAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGTPHIRGSVLQEP 208
LAEDD D ++ D CF+ + H + D G + GN T + SV+ E
Sbjct: 491 LAEDDDDDSVASDLHCFELNMHGSSIQMHDHTGPRRSYTGNMDAPKRRTEYSH-SVVGES 549
Query: 207 S 205
S
Sbjct: 550 S 550
>09_04_0151 -
15154063-15154296,15155616-15155660,15155749-15155820,
15155932-15156024,15156282-15156351,15156716-15156912,
15156946-15157215,15158620-15158757,15158841-15158930,
15159041-15159247,15159987-15160154,15160300-15160503,
15160584-15160670,15160748-15160861,15161689-15161835,
15161914-15162063,15162211-15162276,15162376-15162480,
15162625-15162798,15162930-15163154,15163534-15163590,
15163858-15164019,15164234-15164302,15164391-15164471,
15164823-15164925,15165011-15165156,15165285-15165359,
15165441-15165508,15165586-15165667,15165745-15165858,
15166358-15166476,15166692-15166781,15166862-15166988
Length = 1382
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/71 (19%), Positives = 30/71 (42%)
Frame = -3
Query: 354 LDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGTPHIRGSVLQEPSQTYLLTLSIE 175
+ C + HY D S + C D+ + T + + +++ Q L+ L+ E
Sbjct: 461 IQESCESSIKHYTDAYSSGSLSCEDDSLPDSHALLHVTSRRKPNTMKKSDQEQLMGLASE 520
Query: 174 DVVQRKYRDCK 142
++ ++ D K
Sbjct: 521 RIIPQELNDWK 531
>06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881
Length = 697
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 387 LAEDDGDQILSLDSRCFDTSSH 322
LAEDD D ++ D CF+ S H
Sbjct: 476 LAEDDNDNSVASDLHCFELSMH 497
>05_01_0423 + 3322335-3322385,3322618-3323532,3323636-3323878
Length = 402
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = -3
Query: 399 NGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGTPHIRGS 223
+GDG + DGD ++ D+ S Y ++ + G+G G G G GS
Sbjct: 330 DGDGDGDGDGDDDDDEENDDNDSDSDYDESDEEEEERKRKRGKGIGSGRGRGRGRASGS 388
>03_05_0819 + 27948797-27948956,27948976-27949202
Length = 128
Score = 28.3 bits (60), Expect = 5.7
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -3
Query: 333 TSSHYADTSSVDAHGCSDNGQGNGKGD---SEGTPHIRGSVLQEPSQTYLLTLSIE 175
T++ +A +SS + S G G GKGD S G + E YL LS+E
Sbjct: 34 TAAPFASSSSSSSGAASSGGGGGGKGDGGASGGAEFFGEDGVVEDMDGYLNYLSLE 89
>07_03_1616 - 28167872-28168303
Length = 143
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +2
Query: 209 GSWRTLPRICGVPSESPFPLPCP 277
GS LPR+ GVPS SP P P P
Sbjct: 33 GSGALLPRLDGVPS-SPSPSPAP 54
>04_04_0819 - 28312667-28313219,28315157-28316430
Length = 608
Score = 27.9 bits (59), Expect = 7.5
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Frame = +1
Query: 106 YFLSYLFVLLVGLA---IPIFSLYYVLNGKGEQISLGWFLENTSPYMW-----GTLGIAF 261
++L +L V++VGL +P F+ + L G + LG+ L G G+A
Sbjct: 337 WWLRWLLVMVVGLMAMLVPNFADFLSLVGSSVCVLLGFVLPAAFHLKVFGAEVGWPGLAG 396
Query: 262 SVALSVVGAAMGIHTTGVSI 321
VA+ VVG A+ + T S+
Sbjct: 397 DVAVIVVGTALAVSGTWTSL 416
>04_04_0197 + 23499527-23500603
Length = 358
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 199 SLGWFLENTSPYMWGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPR 348
S+ W + +P++ LG F V+ + AAMG + IV G + P+
Sbjct: 130 SINWRYDGNTPFVLWLLGFCFQVSKDQLMAAMG-GGSEKGIVSGTITHPK 178
>10_08_0288 +
16527666-16527837,16527915-16528132,16528491-16528554,
16528749-16528821,16529294-16529371,16529573-16529730,
16530222-16530390,16530531-16530990,16531098-16531478,
16531834-16532037,16532318-16532451,16532937-16533120
Length = 764
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Frame = -3
Query: 486 VLLLDGHTSKWFRIFLQHTREH------DSSDQTVNGDGLAEDDGD 367
+ L DG+T W R FL TR + D D ++ D L +DD +
Sbjct: 476 IKLEDGNTEFWKRRFLGETRNYLCEEVNDEEDADLDDDELDDDDDE 521
>08_02_1277 +
25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -3
Query: 438 QHTREHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHG--CSDNGQGN 265
QH + H +Q + D DD D D D ++D + ++G C + N
Sbjct: 271 QHEQVHQKEEQVDDDDNDDSDDDDDDDDDDDDDGDDECDHSDERCMPSNGGACPVKTEVN 330
Query: 264 GKGDSEG 244
GK +++G
Sbjct: 331 GKQETKG 337
>07_01_1035 +
8998266-8998349,8999394-8999441,8999714-8999792,
8999874-8999978,9000219-9000328,9000510-9000691,
9000909-9000978,9001066-9001239,9001373-9001477,
9001684-9001815,9002062-9002157,9002273-9002572
Length = 494
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +1
Query: 313 VSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWM 492
VSI+GG A R+ + S+I + + LI + S K E S+ + +W+
Sbjct: 346 VSIIGGSSGAGRLIV--IASMILSFELP-FALIPLLKFSSSSNKMGENKNSIYIVGFSWV 402
Query: 493 AGYVMFGAGL 522
G+V+ G +
Sbjct: 403 LGFVIIGINI 412
>04_04_1538 + 34239913-34241274,34241468-34241578
Length = 490
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Frame = +3
Query: 543 ILWNCCWYRGLWCCS--SGCCQR 605
I+W CC G CC S CC +
Sbjct: 418 IVWGCCPVEGATCCKDHSTCCPK 440
>04_04_0481 -
25541355-25541849,25541933-25542535,25542730-25542837,
25542925-25543260,25543391-25543461,25543692-25543824
Length = 581
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 209 GSWRTLPRICGVPSESPFPLPCPLSEQP 292
G+WR + I G+P+ F L C L E P
Sbjct: 183 GTWRWMLGIAGLPAFIQFILMCMLPESP 210
>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 342 CFDTSSHYADTSSVDAHGCSDNGQGN 265
C D +Y D S GCS N +GN
Sbjct: 1862 CADKDGNYVDCSISPTAGCSYNSEGN 1887
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,481,969
Number of Sequences: 37544
Number of extensions: 415852
Number of successful extensions: 1600
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1597
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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