Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d03f
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29190| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_4012| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.051
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 34 0.12
SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3) 33 0.20
SB_38305| Best HMM Match : CW_binding_1 (HMM E-Value=0.4) 32 0.47
SB_41234| Best HMM Match : CASP_C (HMM E-Value=0.79) 31 0.62
SB_24373| Best HMM Match : Skb1 (HMM E-Value=1.6e-05) 31 0.62
SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9) 31 0.83
SB_22414| Best HMM Match : Taeniidae_ag (HMM E-Value=5.1) 31 0.83
SB_30818| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_44584| Best HMM Match : DEAD_2 (HMM E-Value=0.12) 30 1.9
SB_33965| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_14107| Best HMM Match : Herpes_UL3 (HMM E-Value=4.8) 30 1.9
SB_11533| Best HMM Match : Baculo_PEP_C (HMM E-Value=3.6) 30 1.9
SB_52019| Best HMM Match : Collagen (HMM E-Value=1.3) 29 2.5
SB_28790| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_38309| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_17095| Best HMM Match : GRP (HMM E-Value=1.6) 29 2.5
SB_54788| Best HMM Match : PigN (HMM E-Value=0.46) 29 3.3
SB_46127| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_26281| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_23713| Best HMM Match : Disintegrin (HMM E-Value=6.6e-05) 29 3.3
SB_13751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_4001| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0056) 29 3.3
SB_15136| Best HMM Match : Peptidase_S13 (HMM E-Value=0.27) 29 3.3
SB_39726| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_7955| Best HMM Match : SH3_1 (HMM E-Value=0.77) 29 4.4
SB_5763| Best HMM Match : Cadherin (HMM E-Value=0) 29 4.4
SB_43284| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_25673| Best HMM Match : MFS_1 (HMM E-Value=0.18) 28 5.8
SB_13711| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_57501| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_42106| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 7.7
SB_32284| Best HMM Match : FGGY_N (HMM E-Value=2.6e-07) 28 7.7
SB_22643| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_29190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/100 (28%), Positives = 47/100 (47%)
Frame = +1
Query: 238 WGTLGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITA 417
+G +G ++ S +GAA G +G I V P + K++I V+ +AIYGL+ A
Sbjct: 13 FGVMGATAAMVFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 72
Query: 418 IVLSGMLEKYSEPFTSVSVKQQNWMAGYVMFGAGLAVGLV 537
+++ + K + S G AG A+G+V
Sbjct: 73 VLIGSSISKDYTLYKSFLDLGAGLSVGLSGLAAGFAIGIV 112
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1
Query: 247 LGIAFSVALSVVGAAMGIHTTGVSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVL 426
LG SV LS + A I G + V G + PR+ ++ +IF E + +YGLI A++L
Sbjct: 92 LGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 151
Query: 427 S 429
+
Sbjct: 152 T 152
>SB_4012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 35.1 bits (77), Expect = 0.051
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Frame = -3
Query: 402 VNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGC----SDNGQGNGKGDSEGTPH 235
VN DG + DGD + D D D + GC D+G G+G GD G
Sbjct: 81 VNDDGDGDGDGDGDIRGDGCVVDDDD---DDDDIQGDGCVVDDDDDGDGDGDGDIRGDDD 137
Query: 234 IRG 226
IRG
Sbjct: 138 IRG 140
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = -3
Query: 423 HDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 244
H+ D +GDG + DGD + D C D + GC N G+G GD +G
Sbjct: 42 HEDDD---DGDGNDDCDGDDDIRGDG-CVVVD----DDDDIRGDGCVVNDDGDGDGDGDG 93
Query: 243 TPHIRGSVLQE 211
G V+ +
Sbjct: 94 DIRGDGCVVDD 104
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -3
Query: 420 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 244
+ D +GDG +D+GD D D + GC DNG+G+G GD +G
Sbjct: 581 NGGDGGCDGDGFGDDNGDGF-------GDGDGDGCDDGDGEGEGC-DNGEGDGDGDGDG 631
>SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 33.1 bits (72), Expect = 0.20
Identities = 28/112 (25%), Positives = 44/112 (39%)
Frame = -3
Query: 579 TRAHDTNSNSTE*IHQANSESSAEHHVSRHPVLLLDGHTSKWFRIFLQHTREHDSSDQTV 400
T HDT+++ T H + + H +RH L D HT + R H + + + T
Sbjct: 463 THLHDTHTHETT-RHDTHLHDTHTHETTRHDTHLYDTHTHETTR-HDTHLHDMHTHETTR 520
Query: 399 NGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 244
+ L + + D+ DT H DT+ D H G D+ G
Sbjct: 521 HDTHLHDTTENDTHPHDTTGNDTYLH--DTTENDTHPHDTTGNDTQLHDTTG 570
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/96 (25%), Positives = 41/96 (42%)
Frame = -3
Query: 579 TRAHDTNSNSTE*IHQANSESSAEHHVSRHPVLLLDGHTSKWFRIFLQHTREHDSSDQTV 400
T HDT+++ T H + + H +RH L D HT + R H + + + T
Sbjct: 403 THLHDTHTHETP-RHDTHLHDTHPHETTRHDTHLHDTHTHETTR-HDTHLHDTHTHETTR 460
Query: 399 NGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAH 292
+ L + + D+ DT +H +T+ D H
Sbjct: 461 HDTHLHDTHTHETTRHDTHLHDTHTH--ETTRHDTH 494
>SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3)
Length = 509
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -3
Query: 399 NGDGLA-EDDGDQILSLDSRCFDTSSHYADT--SSVDAHGCSDNGQGNGKGDSEGT 241
+GDG +DDG S D D S Y D S D GC D+G N GD +G+
Sbjct: 393 DGDGGGCDDDGGDDSSCDDDGGDDSGCYDDGNGSVFDDEGCDDSGCVNDGGDGDGS 448
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = -3
Query: 399 NGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 244
+GDG + DDG D D D + D GC D+G + D +G
Sbjct: 364 DGDGSSCDDGGDSSGCDDDGGDDGG--CDDNDGDGGGCDDDGGDDSSCDDDG 413
>SB_38305| Best HMM Match : CW_binding_1 (HMM E-Value=0.4)
Length = 1145
Score = 31.9 bits (69), Expect = 0.47
Identities = 23/80 (28%), Positives = 33/80 (41%)
Frame = -3
Query: 516 SAEHHVSRHPVLLLDGHTSKWFRIFLQHTREHDSSDQTVNGDGLAEDDGDQILSLDSRCF 337
SAEHHV + H +W ++ Q R + V GD +DD D+ D +
Sbjct: 9 SAEHHVRCRDRTVQVQHQLRWGVLWGQDVRLLRLASCRVVGDD-DDDDDDEGCDDDDDDY 67
Query: 336 DTSSHYADTSSVDAHGCSDN 277
D + D D GC D+
Sbjct: 68 DDDDYDDDDDDDDDKGCDDD 87
>SB_41234| Best HMM Match : CASP_C (HMM E-Value=0.79)
Length = 296
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -3
Query: 402 VNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 244
VNGDG + DGD D D D G D+G G+G GD +G
Sbjct: 208 VNGDGNGDGDGDGNGDGDGDDGDDDGDGGGDDDGDGDGV-DDGDGDGDGDCDG 259
>SB_24373| Best HMM Match : Skb1 (HMM E-Value=1.6e-05)
Length = 494
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -3
Query: 426 EHDSSDQTVNGDGLAEDDGDQILSLDS-RCFDTSSHYADTSSVDAHGCSDNGQGNGKGDS 250
++++ D+ + DG DD D+ +D+ CF + D S D GC N N KG+
Sbjct: 272 DYNNDDEENDDDGNDSDDDDERNDVDNEECF-VAEICKDKSMQDVSGCIVNNSPNVKGNK 330
Query: 249 E 247
+
Sbjct: 331 Q 331
>SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9)
Length = 560
Score = 31.1 bits (67), Expect = 0.83
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = -3
Query: 426 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 247
++D+ D+ +N D A DD D ++ D+ + AD ++ G D+ G+ D E
Sbjct: 219 DNDADDENINSDDDAADDADYYVNSDADDDINGDYDADDEDING-GDDDDINGDNDADDE 277
>SB_22414| Best HMM Match : Taeniidae_ag (HMM E-Value=5.1)
Length = 249
Score = 31.1 bits (67), Expect = 0.83
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = -3
Query: 405 TVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 244
TV DG + DGD D AD + DA GC +G G+G GD +G
Sbjct: 24 TVGCDGDGDGDGDG----DGDGDGDGDADADADA-DADGCDGDGDGDGDGDGDG 72
>SB_30818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = -3
Query: 420 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 244
D S + GD +DD D + D C D S D S D + D+ N D G
Sbjct: 21 DDSGEDDCGDNSGDDDSDDDIGDDDSCDDNS---RDDDSGDYYSVDDDSDDNSIDDDSG 76
>SB_44584| Best HMM Match : DEAD_2 (HMM E-Value=0.12)
Length = 540
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 408 QTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 244
+T+N E G QI +S+ + + Y D + D G +D G G G G G
Sbjct: 37 ETINNIHSVEVSGAQIPIQNSKATNPPNLYVDNDNDDGGGDTDGGGGCGGGGGGG 91
>SB_33965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 528
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 336 DTSSHYADTSSVDAHGCSDNGQGNGKGDSEGTPHIRG 226
D S +T +GC+D+G +G DS G + +G
Sbjct: 107 DHSDQRDNTIGSSRYGCNDDGDSDGDSDSHGNDYHKG 143
>SB_14107| Best HMM Match : Herpes_UL3 (HMM E-Value=4.8)
Length = 314
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -3
Query: 393 DGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 244
DG +DDGD D C D GC +G G+G GD +G
Sbjct: 19 DGDGDDDGDDDGGGD--CGGDGDGDGDGDGDGDGGCDGDGDGDGDGDDDG 66
>SB_11533| Best HMM Match : Baculo_PEP_C (HMM E-Value=3.6)
Length = 491
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = -3
Query: 420 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 244
D D +G+G +DD D D D D D +G D+ G+G GD +G
Sbjct: 393 DDDDDDGDGNG-GDDDDDDDGDGDGDDGDGDDGDNDDDDGDGNGDDDDDDGDGDGDGDG 450
>SB_52019| Best HMM Match : Collagen (HMM E-Value=1.3)
Length = 99
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = -3
Query: 420 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 247
D D +GDG DDGD +D D D G D+G G GD +
Sbjct: 14 DDGDDGDDGDGDNGDDGDD-GDVDDNVCDGDGDDGDDGDNVCDGDGDDGDGGDDGDDD 70
>SB_28790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -3
Query: 381 EDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 244
++DGD +D C D D GC +G+GNG GD +G
Sbjct: 9 DNDGDDDNDVDGDC---GGDGGDGVGGDG-GCCGDGEGNGDGDGDG 50
>SB_38309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = -3
Query: 426 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVD---AHGCSDNGQGNGKG 256
++DS +T +GD ++DG + D Y D D +HG +DN +G
Sbjct: 105 KYDSHGETDDGDEYDDEDGYDKYDSHGKT-DDDDEYDDEDGYDEYDSHGETDNDDDDGDD 163
Query: 255 DSEG 244
D G
Sbjct: 164 DGSG 167
>SB_17095| Best HMM Match : GRP (HMM E-Value=1.6)
Length = 203
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -3
Query: 393 DGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEG 244
DG DD D I D+ + D D DN G GKG+ +G
Sbjct: 75 DGADNDDDDDIDRTDNDGCGNDVDHDDNGDYDDCIDDDNNDGGGKGNGDG 124
>SB_54788| Best HMM Match : PigN (HMM E-Value=0.46)
Length = 587
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 539 FTKPTASPAPNITYPAIQFCCLTDTLVNGSEYFSSI 432
F A+ +P Y AI+F CLT ++ + Y S+
Sbjct: 159 FAIGAATKSPKPVYAAIEFVCLTQKIIQAAVYHFSL 194
>SB_46127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -3
Query: 426 EHDSSDQTVNGDG--LAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGD 253
+ D +D V+ D A DD D DS D + Y D D + DNG + GD
Sbjct: 136 DDDDNDSAVDDDDNDSAVDDDDN----DSAVDDYKNGYDDNGD-DGYDDDDNGSDDDDGD 190
Query: 252 SEGTPHIR 229
G P++R
Sbjct: 191 DRG-PYVR 197
>SB_26281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 29.1 bits (62), Expect = 3.3
Identities = 26/82 (31%), Positives = 34/82 (41%)
Frame = +2
Query: 23 NRAKKGRPFRD*RVKTAPNTLTKISR*DTS*VTYSCSWWDLQSRYFRCTTSSMERVSR*V 202
N+A+ G PF + +AP L S T+ VT C+ S+Y C
Sbjct: 77 NKARCGYPFYSEPISSAPKVLELKSEEKTAMVTTGCTIDLAASQYLHC------------ 124
Query: 203 WDGSWRTLPRICGVPSESPFPL 268
DG+W LP SE PF L
Sbjct: 125 -DGTWAPLPL---QSSEKPFKL 142
>SB_23713| Best HMM Match : Disintegrin (HMM E-Value=6.6e-05)
Length = 1154
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = -3
Query: 423 HDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 247
+D D +GDG + DGD D D Y D D G DNG G GDS+
Sbjct: 144 NDDGDGDGDGDGDGDGDGDGNDDGDGDGNDDGDGYGDGDG-DGDGDGDNG---GLGDSD 198
Score = 28.7 bits (61), Expect = 4.4
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Frame = -3
Query: 423 HDSSDQTVNGDGLAEDDGDQILSLDSRCFDT--SSHYADTSSVDAHGCSDNGQGNGKGDS 250
+D D +GDG + DGD DS C D + D+ DN +G GD
Sbjct: 172 NDDGDGYGDGDGDGDGDGDNGGLGDSDCNDDCGDGDFGGNGDYDSSVVYDNDGDDGSGDD 231
Query: 249 EGTPHIRGSVLQEPSQTYLLTLSIE 175
G + S+T +L L E
Sbjct: 232 HD-----GGEYRTSSRTMILLLPSE 251
>SB_13751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = -3
Query: 426 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 247
+ D D +GDG + DGD D D + G +G G+G GD +
Sbjct: 761 DDDDDDDDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGAGAGDGGGDGDGDGDGDGDGD 820
Query: 246 G 244
G
Sbjct: 821 G 821
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = -3
Query: 426 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 247
+ D D +GDG + DGD D D A +G G+G GD +
Sbjct: 759 DDDDDDDDDDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGAGAGDGGGDGDGDGDGDGD 818
Query: 246 G 244
G
Sbjct: 819 G 819
>SB_4001| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0056)
Length = 508
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = -3
Query: 420 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSEGT 241
+ D +GDG + DGD D D + D D+ G+G DS+GT
Sbjct: 422 NDDDSDGDGDGDYDSDGDGDYDSDGDGDDDDNGDGDVDGGGDGDDDDDSDGDGDDDSDGT 481
>SB_15136| Best HMM Match : Peptidase_S13 (HMM E-Value=0.27)
Length = 638
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -3
Query: 426 EHDSSDQTV-NGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDS 250
+ DS D V +GDG E +GD + D A D G G G+G GDS
Sbjct: 525 DDDSCDDDVGDGDGGGEGNGDGYEDVG----DGDDDGAGDGGGDGDGDGYEGVGDGNGDS 580
Query: 249 EG 244
+G
Sbjct: 581 DG 582
>SB_39726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/75 (24%), Positives = 32/75 (42%)
Frame = +3
Query: 87 PKSQDEILLKLLIRAPGGTCNPDIFAVLRPQWKG*ADKFGMVLGEHFPVYVGYPRNRLFR 266
P + ILL L+ PD+ + +W+ F +VL + +++ N +
Sbjct: 434 PYNNYNILLLELLEDWSVNYRPDLLTFVPYEWQ-----FNIVLHDFEMIWIANEHNWI-E 487
Query: 267 CPVRCRSSHGHPHYW 311
C R +G PH+W
Sbjct: 488 CSSNPRQENGRPHHW 502
>SB_7955| Best HMM Match : SH3_1 (HMM E-Value=0.77)
Length = 1002
Score = 28.7 bits (61), Expect = 4.4
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 5/111 (4%)
Frame = -3
Query: 459 KWFRIFLQHTRE-HDSSDQTVNG--DGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHG 289
++ ++ Q R + SSD+T++ D D D RC+D+ HY S D
Sbjct: 846 QYLKLIAQRRRSTYCSSDETLDSFDDESVIQTPDSDQKPDHRCYDSRLHY---SEEDYFS 902
Query: 288 CSDNGQGNGKGDSEGTPHIRGSVLQEPSQ--TYLLTLSIEDVVQRKYRDCK 142
D+ + + + E +PH + + + T+L LS++ +K R K
Sbjct: 903 DEDDDEFDDFDEEEESPHNFSATMLIFLRILTFLNCLSVQRETSKKTRGVK 953
>SB_5763| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 674
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = -3
Query: 411 DQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQG--NGKGDSEGTP 238
D G + DGD + D D Y+D + GC D G G GD G
Sbjct: 24 DDNGGGADVGGSDGDD--NDDDNDEDDGDDYSDDNIGGDGGCGDGGGGEDTDSGDVSGDI 81
Query: 237 HIRGSVLQEPSQTYLLTLSIEDVV 166
+ + +E Y+L ++ ++V
Sbjct: 82 IVDSPLDREFKNVYILNVTAANIV 105
>SB_43284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 519
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/61 (29%), Positives = 22/61 (36%)
Frame = -3
Query: 426 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 247
+ D D +GDG + DGD D D D G D+G G G S
Sbjct: 117 DDDDDDDDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGGGSDDGGDDDDGDGGGSNGSG 176
Query: 246 G 244
G
Sbjct: 177 G 177
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/61 (29%), Positives = 24/61 (39%)
Frame = -3
Query: 426 EHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 247
+ D D +GD DD D+ D D D D D+G G+G GD +
Sbjct: 76 DDDDDDDDDDGDXXXXDD-DEDDDDDDGDGDGGDDDDDDDDDDDDDDDDDGDGDGDGDGD 134
Query: 246 G 244
G
Sbjct: 135 G 135
>SB_25673| Best HMM Match : MFS_1 (HMM E-Value=0.18)
Length = 634
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = -3
Query: 423 HDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDA--HGCSDNGQGNGKGDS 250
+DS D V+GDG DDGD D S Y D D G G+G GD
Sbjct: 348 YDSGDSGVDGDG-GGDDGDD----DGGDSGDSGVYGDGDGDDGDDDGGDSGVDGDGYGDV 402
Query: 249 EG 244
+G
Sbjct: 403 DG 404
>SB_13711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 346 RIKTKNLISVIF-CEAVAIYGLITAIVLSGMLEKYSEPFTSVSVKQQNWMA 495
R+ K L+ VIF CEAV ++GL+TAI + S P + ++++ +M+
Sbjct: 167 RVPCKILVFVIFTCEAV-MFGLLTAIAIDKYTNIIS-PLKGLVLEERKFMS 215
>SB_57501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = -3
Query: 420 DSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYADTSSVDAHGCSDNGQGNGKGDSE 247
D D N D +DD D + D D D D++ DNG GN D +
Sbjct: 74 DDDDDDDNDDD-KDDDDDDVDDDDDDNDDDDDDSDDDDDNDSNDDDDNGDGNDDDDDD 130
>SB_42106| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 929
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 270 PVRCRSSHGHPHYWCQHSGRRCQS 341
P+RCR HP++W H R ++
Sbjct: 67 PIRCRYLRLHPYHWRSHISLRMEA 90
>SB_32284| Best HMM Match : FGGY_N (HMM E-Value=2.6e-07)
Length = 582
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -3
Query: 459 KWFRIFLQHTREHDSSDQTVNGDGLAEDDGDQILSLDSRCFDTSSHYAD 313
K ++FL+ R+ Q + G DDG Q+ S D D S H D
Sbjct: 354 KKHKVFLKMQRDQLEYRQMMVDTGHVIDDGGQVTSNDRPVTDDSGHVID 402
>SB_22643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 215 WRTLPRICGVPSESPFPLPCPLSEQPWASTLL 310
WR ++ +PS +P PL CP +++ S +L
Sbjct: 21 WRHTKKMSTIPSYTPKPLICPSNKELHPSAML 52
>SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 82 LNQNLKMRYFLSYLFVLLVGLAIPIFSLYYVLNGKGEQ 195
+ Q + ++Y+F LLV +IP + VLN GEQ
Sbjct: 424 IEQIMDQEVLMTYIFHLLVIASIPYVLVLQVLNLSGEQ 461
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,909,261
Number of Sequences: 59808
Number of extensions: 463922
Number of successful extensions: 2368
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2264
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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