Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d02r
(716 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 26 0.31
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 26 0.31
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 26 0.31
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 2.2
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 23 2.9
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 2.9
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 3.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 3.8
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 5.0
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 22 5.0
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 5.0
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 6.7
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 6.7
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 22 6.7
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 6.7
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.8
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 8.8
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.31
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 547 ALNNNRDFDIKNHKKSLISNYQILVTSVN 633
+L+NN +++ N+KK +NY+ L ++N
Sbjct: 84 SLSNNYNYNNNNYKKLYCNNYKKLYYNIN 112
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.31
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 547 ALNNNRDFDIKNHKKSLISNYQILVTSVN 633
+L+NN +++ N+KK +NY+ L ++N
Sbjct: 84 SLSNNYNYNNNNYKKLYCNNYKKLYYNIN 112
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.31
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 547 ALNNNRDFDIKNHKKSLISNYQILVTSVN 633
+L+NN +++ N+KK +NY+ L ++N
Sbjct: 84 SLSNNYNYNNNNYKKLYCNNYRKLYYNIN 112
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 23.4 bits (48), Expect = 2.2
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +2
Query: 185 HYKNCQTFETLDKIKIKITNARLSHKSNFNCAILRNHLH 301
H C + L+K + + S ++ I+RNHL+
Sbjct: 308 HESQCPMLQKLEKPVLSSSTTTTSPMTSTKSTIVRNHLN 346
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1
Query: 577 KNHKKSLISNYQIL 618
KNHK+ LISN IL
Sbjct: 14 KNHKEQLISNDYIL 27
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 212 FRMFDSFYSDIILLCGKLTRF 150
FRMF + S +L+C + R+
Sbjct: 117 FRMFGLYLSSFVLVCISMDRY 137
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 541 NQALNNNRDFDIKNHKKSLISNYQILVTSV 630
N NNN + + N+ K L NY I + +
Sbjct: 98 NNNYNNNYNNNYNNNYKKLYKNYIINIEQI 127
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 541 NQALNNNRDFDIKNHKKSLISNYQILVTSV 630
N NNN + + N+ K L NY I + +
Sbjct: 98 NNNYNNNYNNNYNNNYKKLYKNYIINIEQI 127
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 196 LSNIRNFGQNKNQNHK 243
+SNI N+ N N N K
Sbjct: 90 ISNISNYNNNNNYNKK 105
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 312 NSTG*NRISTCANLSLPALVLYY 380
++TG + S +L +PAL+LY+
Sbjct: 5 SATGFSASSVFLSLLIPALILYF 27
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 196 LSNIRNFGQNKNQNHK 243
+SNI N+ N N N K
Sbjct: 328 ISNISNYNNNNNYNKK 343
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.8 bits (44), Expect = 6.7
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +2
Query: 560 TETSTLKIIKSHLYL 604
T+ T+K++K HL+L
Sbjct: 907 TKRRTMKVVKYHLFL 921
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.8 bits (44), Expect = 6.7
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +2
Query: 560 TETSTLKIIKSHLYL 604
T+ T+K++K HL+L
Sbjct: 945 TKRRTMKVVKYHLFL 959
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.8 bits (44), Expect = 6.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 391 YVYTVLTNTRLNTSM 435
+ YT++ N R NTSM
Sbjct: 483 FSYTIVINNRNNTSM 497
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 6.7
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 236 ITNARLSHKSNFNCAILRN 292
+T +L H N+ C +RN
Sbjct: 369 LTKVQLIHAGNYTCHAVRN 387
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.8
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -3
Query: 339 WIFYSIQWN 313
W+ Y++QWN
Sbjct: 43 WVDYNLQWN 51
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.8
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -3
Query: 339 WIFYSIQWN 313
W+ Y++QWN
Sbjct: 43 WVDYNLQWN 51
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.8
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -3
Query: 339 WIFYSIQWN 313
W+ Y++QWN
Sbjct: 43 WVDYNLQWN 51
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.8
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -3
Query: 339 WIFYSIQWN 313
W+ Y++QWN
Sbjct: 43 WVDYNLQWN 51
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.8
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -3
Query: 339 WIFYSIQWN 313
W+ Y++QWN
Sbjct: 43 WVDYNLQWN 51
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.8
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -3
Query: 339 WIFYSIQWN 313
W+ Y++QWN
Sbjct: 43 WVDYNLQWN 51
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 8.8
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -3
Query: 339 WIFYSIQWN 313
W+ Y++QWN
Sbjct: 111 WVDYNLQWN 119
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 8.8
Identities = 5/9 (55%), Positives = 8/9 (88%)
Frame = -3
Query: 339 WIFYSIQWN 313
W+ Y++QWN
Sbjct: 111 WVDYNLQWN 119
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 8.8
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +2
Query: 209 ETLDKIKIKITNARL-SHKSNFNC 277
++LD +KI + N R+ S+KSN C
Sbjct: 128 KSLDDVKI-LRNDRIDSYKSNLKC 150
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,132
Number of Sequences: 438
Number of extensions: 3155
Number of successful extensions: 28
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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