Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11d02f
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.6  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.6  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    23   2.6  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   3.5  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   6.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   6.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.0  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 274 LVYNEACRETADKESNWVQ 218
           L Y E C E  +K+S W +
Sbjct: 307 LAYYEICPEILNKDSGWTK 325


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 61  TLHLFCLITVYFYCWLT 11
           TLHLFC++ V    +LT
Sbjct: 170 TLHLFCVLYVVLLHFLT 186


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 292 CISSPKLVYNEACRETADKESNWV 221
           C+ + K V++  CR T +   N++
Sbjct: 136 CVQTEKSVFDFLCRHTVEYFQNYI 159


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 140 TPVLLKFHNNETSVVISNTEISWMLGLN 223
           TP+   FH+  TSV+ S     W L LN
Sbjct: 95  TPLFF-FHSFMTSVLFSQVASRWPLFLN 121


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 61  TLHLFCLITVYFYCWLT 11
           TLHLFC++ V    +LT
Sbjct: 170 TLHLFCVLYVVLLHFLT 186


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 387 ALARLFFVRSKVYILLK*RIKT 452
           AL ++F  R  +Y+ +K R+KT
Sbjct: 103 ALYQVFVFRRSIYLQIKERLKT 124


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 230 GFLIGSFTARFVIDKFGRRYTLLASM 307
           GF  G+FT       FGR Y  ++S+
Sbjct: 14  GFHFGAFTCEGCKSFFGRTYNNISSI 39


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 418 LDRTKNSRAKAPQELRHHKHPAYCN 344
           +D T NS+   P ++R   +  YC+
Sbjct: 106 IDETLNSKPLKPVKIRTKVYLVYCS 130


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 418 LDRTKNSRAKAPQELRHHKHPAYCN 344
           +D T NS+   P ++R   +  YC+
Sbjct: 102 IDETLNSKPLKPVKIRTKVYLVYCS 126


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 316 SRWNGHSRIRYNR 354
           S W G+ RIRY +
Sbjct: 278 SNWFGNKRIRYKK 290


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,246
Number of Sequences: 336
Number of extensions: 3255
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)