Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d02f
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1045 + 23528768-23528879,23528979-23530399 47 1e-05
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391... 46 2e-05
05_07_0152 + 28044733-28045032,28045131-28045220,28045770-280458... 44 7e-05
01_07_0304 - 42628086-42628104,42628828-42630263 44 9e-05
07_03_1046 - 23531218-23532638,23532781-23532868 43 2e-04
03_02_0024 + 5079690-5081351 43 2e-04
03_02_0023 + 5065962-5066079,5066179-5067614 42 4e-04
12_02_0509 - 19829360-19830400,19831475-19831821,19831920-19832073 40 0.001
11_06_0493 - 24310412-24311362,24311437-24311783,24311857-24311989 40 0.001
04_04_0345 - 24542869-24543540,24543725-24543805,24543845-245439... 40 0.001
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 40 0.002
11_06_0491 - 24298220-24299058,24299085-24299519,24299606-24299747 39 0.003
03_01_0204 + 1611837-1611840,1611926-1612048,1614570-1614659,161... 39 0.003
10_06_0088 - 10538037-10539463,10539696-10539789 39 0.004
11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931 38 0.006
10_08_1053 - 22575281-22575409,22575516-22575653,22575786-225758... 38 0.008
04_04_0593 - 26480036-26481438,26481915-26482083 38 0.008
12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387 37 0.011
04_04_1601 + 34707975-34708209,34708598-34709970 34 0.075
11_06_0421 + 23331702-23331723,23332161-23332197,23333397-233335... 33 0.13
03_03_0040 - 13999040-13999179,13999524-13999638,13999759-139998... 33 0.13
04_04_0077 + 22568757-22568895,22568999-22569954,22570021-22570488 32 0.30
11_04_0293 + 15926561-15928834 32 0.40
05_07_0239 - 28599452-28599564,28599685-28599799,28600051-286001... 32 0.40
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 31 0.53
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 31 0.53
02_02_0155 + 7272563-7272630,7272934-7273031,7273491-7274057,727... 31 0.53
04_04_0481 - 25541355-25541849,25541933-25542535,25542730-255428... 30 1.2
04_04_1600 + 34704527-34704758,34705393-34706777 30 1.6
08_01_0646 + 5592386-5592493,5592736-5592807,5592882-5593046,559... 29 2.8
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 29 2.8
03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584 28 5.0
03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964 28 5.0
01_05_0334 - 21068575-21068642,21068723-21068813,21068955-210690... 28 5.0
12_01_0210 - 1593732-1593823,1594730-1594773,1594895-1594983,159... 28 6.5
01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 28 6.5
04_04_0087 + 22718930-22719068,22719165-22719484,22721406-22722500 27 8.7
>07_03_1045 + 23528768-23528879,23528979-23530399
Length = 510
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/123 (27%), Positives = 52/123 (42%)
Frame = +2
Query: 185 ISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWML 364
IS+ ++ ++G+ + LIGSF A D GRRYT++ + ML
Sbjct: 55 ISDGKVEVLMGILNLYSLIGSFAAGRTSDWIGRRYTIVFAAVIFFAGAFLMGFAVNYAML 114
Query: 365 MMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFISYQT 544
M +F+ G + +Y AE++ RG L+ N G LL + S
Sbjct: 115 MFGRFVAGIGVGYALMIAPVYTAEVSPASARGFLTSFPEVFINFGILLGYVSNYAFSRLP 174
Query: 545 LNL 553
LNL
Sbjct: 175 LNL 177
>05_07_0151 +
28038178-28038480,28038578-28038667,28039130-28039189,
28039274-28039339,28039562-28039627,28039719-28039794,
28039972-28040036,28040115-28040192,28040362-28040442,
28040526-28040610,28040702-28040748,28040969-28041028,
28041179-28041244,28041327-28041386,28041524-28041638,
28041733-28041845
Length = 476
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Frame = +2
Query: 185 ISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWML 364
+S +E S L+ +G ++G+ + + + GR+ +L+ + L
Sbjct: 97 LSISEFSAFGSLSNVGAMVGAIASGQMAEYIGRKGSLIIAAVPNIIGWLAISFAKDASFL 156
Query: 365 MMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFISYQT 544
M + L FG ++ +Y AEI+ ++ RG L + +G LL G F+ ++
Sbjct: 157 YMGRLLEGFGVGVISYTVPVYIAEISHQNTRGALGSVNQLSVTIGILLAYLLGMFVPWRL 216
Query: 545 LNL-----CLLFIPLTFLI 586
L + C L IP F I
Sbjct: 217 LAVIGSIPCTLLIPGLFFI 235
>05_07_0152 +
28044733-28045032,28045131-28045220,28045770-28045829,
28045912-28045977,28046161-28046226,28046330-28046405,
28046721-28046785,28046879-28046971,28047302-28047322,
28047600-28047692,28047939-28047998,28048157-28048222,
28048314-28048373,28048498-28048612,28048738-28048850
Length = 447
Score = 44.4 bits (100), Expect = 7e-05
Identities = 30/131 (22%), Positives = 59/131 (45%)
Frame = +2
Query: 194 TEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMT 373
+E S L+ +G ++G+ + + + GR+ +L+ + L M
Sbjct: 99 SEFSVFGSLSNVGAMVGAIASGQMAEYIGRKGSLMIAAIPNIIGWLAISFAKDSSFLYMG 158
Query: 374 QFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFISYQTLNL 553
+ L FG ++ +Y AEI+ +++RG L + +G LL G F+ ++ L +
Sbjct: 159 RLLEGFGVGVISYTVPVYIAEISPQNMRGALGSVNQLSVTVGILLAYLLGMFVPWRLLAV 218
Query: 554 CLLFIPLTFLI 586
+ +P T LI
Sbjct: 219 -IGILPCTVLI 228
>01_07_0304 - 42628086-42628104,42628828-42630263
Length = 484
Score = 44.0 bits (99), Expect = 9e-05
Identities = 29/108 (26%), Positives = 46/108 (42%)
Frame = +2
Query: 185 ISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWML 364
I++ E+ +LG+ + L+GSF A D GRR T++ + ML
Sbjct: 3 ITDVEVEILLGILNLYSLVGSFAAGRTSDWIGRRLTIILAAVIFFVGAIMMGLSVNYPML 62
Query: 365 MMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
M +F+ G + +Y AE++ RG L+ N G LL
Sbjct: 63 MAGRFVAGIGVGYAFMIAPVYTAEVSPASSRGFLTSFPEVFINFGILL 110
>07_03_1046 - 23531218-23532638,23532781-23532868
Length = 502
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/108 (26%), Positives = 48/108 (44%)
Frame = +2
Query: 185 ISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWML 364
I++ ++ ++G+ I L+GSF A D GRR+T++ + L
Sbjct: 47 ITDVQVEILMGILNIYSLVGSFAAGRTADWIGRRFTVVFAAAFFFARALLMGFSGDYATL 106
Query: 365 MMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
M+ +F+ G + +Y AEI+ RG L+ NLG LL
Sbjct: 107 MVGRFVAGVGVGYAIMIAPVYTAEISPASSRGFLTSFPEVSINLGILL 154
>03_02_0024 + 5079690-5081351
Length = 553
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/108 (25%), Positives = 46/108 (42%)
Frame = +2
Query: 185 ISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWML 364
IS+ ++ + G+ I L+GS A D GRRYT++ + ++
Sbjct: 91 ISDAKVEVLAGIINIYSLVGSLAAGRTSDWIGRRYTMVLASVIFFAGALIMGLAPSYAIV 150
Query: 365 MMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
M+ +F+ G + +Y AE+A RG L+ N G LL
Sbjct: 151 MLGRFVAGVGVGYALMIAPVYTAEVAPTSARGLLTSFPEVFINAGVLL 198
>03_02_0023 + 5065962-5066079,5066179-5067614
Length = 517
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/108 (27%), Positives = 44/108 (40%)
Frame = +2
Query: 185 ISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWML 364
I++T+I + G+ I L GS A D GRRYT++ + L
Sbjct: 57 ITDTQIEILAGVINIYSLFGSLAAGMTSDWLGRRYTMVLAAAIFFTGALLMGLAPNYAFL 116
Query: 365 MMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
M +F+ G + +Y AE+A RG L+ N G LL
Sbjct: 117 MAGRFVAGIGVGYALMIAPVYTAEVAPTSARGFLTSFPEVFNNSGILL 164
>12_02_0509 - 19829360-19830400,19831475-19831821,19831920-19832073
Length = 513
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/108 (28%), Positives = 43/108 (39%)
Frame = +2
Query: 185 ISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWML 364
+S+ EI ++G I L+GS A + D+ GRR T+ S + L
Sbjct: 69 VSDAEIEVLIGATSIYSLVGSLAAGWACDRAGRRRTIALSAAMFLAGSAATAAASGYAAL 128
Query: 365 MMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
M Q + V +Y AEIA RG L+ N G LL
Sbjct: 129 MAGQLVAGVACGFGLVVAPVYIAEIAPPSSRGFLASIPEIAGNSGILL 176
>11_06_0493 - 24310412-24311362,24311437-24311783,24311857-24311989
Length = 476
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/110 (27%), Positives = 44/110 (40%)
Frame = +2
Query: 179 VVISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGW 358
V +S+ +I + G + L+ A + D GRR TL+ +
Sbjct: 60 VGLSDAQIEVLAGSMNVFMLVSILAAGWAADVLGRRGTLVLANAYLMAGALAMSLGATYA 119
Query: 359 MLMMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
LM +F+ S G V +Y AEI+ RG LS N+G LL
Sbjct: 120 ALMAARFVTSVGVGFSLVVAPVYNAEISPASARGVLSSLLDMFVNVGILL 169
>04_04_0345 -
24542869-24543540,24543725-24543805,24543845-24543910,
24543991-24544098,24545101-24545436,24545516-24545586,
24546105-24546252
Length = 493
Score = 40.3 bits (90), Expect = 0.001
Identities = 33/118 (27%), Positives = 54/118 (45%)
Frame = +2
Query: 227 IGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAIL 406
+G +IG+ ++ D +GRR + L + ++L++ + L G I
Sbjct: 82 VGAIIGAAGGGWINDTYGRRKSTLVADMLFALGSLVMCAAGGPYILILGRLLVGLGVGIA 141
Query: 407 CTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFISYQTLNLCLLFIPLTF 580
+Y AE A +IRG L +ST N+L+I G F SY +NL +P T+
Sbjct: 142 SVTAPVYIAEAAPSEIRGGL-VST-------NVLMITGGQFFSY-LINLGFTEVPGTW 190
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/100 (26%), Positives = 47/100 (47%)
Frame = +2
Query: 209 MLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWS 388
++ ++ IG I + + V D FGRR L+AS ++L++ + +
Sbjct: 48 IVAMSLIGATIITTFSGAVADSFGRRPMLIASAVLYFVSGLVMLWAPNVYVLLLARLIDG 107
Query: 389 FGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
FG + T+ +Y +E A DIRG L+ ++ + G L
Sbjct: 108 FGIGLAVTLVPLYISETAPTDIRGLLNTLPQFSGSGGMFL 147
>11_06_0491 - 24298220-24299058,24299085-24299519,24299606-24299747
Length = 471
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/110 (25%), Positives = 43/110 (39%)
Frame = +2
Query: 179 VVISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGW 358
+ + + EI + G + L+ A + D GRR TL+ +
Sbjct: 63 MALRDAEIEVLTGSMNVFMLVSILAAGWAADVLGRRGTLVLANAFLMAGALAMSLGATYA 122
Query: 359 MLMMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
LM +F+ S G V +Y AEI+ RG +S N+G LL
Sbjct: 123 ALMAARFVTSVGVGFSLVVAPVYNAEISPASARGVVSTLFEMFVNVGILL 172
>03_01_0204 +
1611837-1611840,1611926-1612048,1614570-1614659,
1615529-1616095,1616235-1616959,1617065-1617252,
1617331-1617778
Length = 714
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/100 (22%), Positives = 49/100 (49%)
Frame = +2
Query: 209 MLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWS 388
+L ++ IG I + + + + G+R L + + +ML++ + ++
Sbjct: 94 ILAMSLIGATIITALSGMITNSIGKRPLLSVAAILYSISALIMFQASNEYMLLLARLIYG 153
Query: 389 FGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
FG+ ++ T +Y +E A ++RG L+ ++ +LG LL
Sbjct: 154 FGSGLVVTYAPLYISETAPTNMRGLLNTLPQFNGSLGMLL 193
>10_06_0088 - 10538037-10539463,10539696-10539789
Length = 506
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/107 (25%), Positives = 46/107 (42%)
Frame = +2
Query: 188 SNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLM 367
++T++ + G+ + L+GS TA V D GRR T+ + L+
Sbjct: 50 NDTQVQVLAGILNVCALVGSLTAGRVSDCVGRRLTISLAACIFLVGSVLMGLAPNFATLL 109
Query: 368 MTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
+ + G + +Y AEIA DIRG+L+ + G L+
Sbjct: 110 AGRCVAGVGVGYALMIAPVYAAEIASADIRGSLTSLPEICISFGILI 156
>11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931
Length = 478
Score = 37.9 bits (84), Expect = 0.006
Identities = 28/108 (25%), Positives = 42/108 (38%)
Frame = +2
Query: 185 ISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWML 364
+S+ EI + G + L A + D GRR T++ + L
Sbjct: 64 LSDAEIEVLAGSMNVFMLASILAAGWAADTLGRRGTIVLANAFLMAGALAMSLGATYAAL 123
Query: 365 MMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
M +F+ S G V +Y AEI+ RG L+ N+G LL
Sbjct: 124 MAARFVTSVGVGFARVVAPVYNAEISPASTRGVLTSLLDMFINVGILL 171
>10_08_1053 -
22575281-22575409,22575516-22575653,22575786-22575884,
22576281-22576361,22577171-22577233,22577473-22577520,
22577622-22577990,22578082-22578183,22578290-22578414,
22578500-22578566,22578817-22578895,22578928-22579079,
22579182-22579223
Length = 497
Score = 37.5 bits (83), Expect = 0.008
Identities = 31/112 (27%), Positives = 44/112 (39%)
Frame = +2
Query: 188 SNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLM 367
S IS + + G LIGS A + D GRR L+ S +++
Sbjct: 84 SGATISLKVSGSLYGALIGSILAFNIADFLGRRRELILSSVSYLIGALLTAAAPNFPIMV 143
Query: 368 MTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAG 523
+ +F + G + +Y AE A IRG L + LG LL AG
Sbjct: 144 VGRFFYGIGIGLAMHAAPMYIAETAPSQIRGMLISLKEFFIVLGMLLGYIAG 195
>04_04_0593 - 26480036-26481438,26481915-26482083
Length = 523
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/100 (26%), Positives = 40/100 (40%)
Frame = +2
Query: 209 MLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWS 388
++G + L+GS + D GR++T+ +LM+ + L
Sbjct: 82 LVGCLSVVSLLGSLSGGRTSDAIGRKWTMALGAIVFQAGAAIMTFAPSFTVLMIGRLLAG 141
Query: 389 FGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
G V +Y AEI+ RGTL+ NLG LL
Sbjct: 142 VGIGFGAMVSAVYIAEISPAAARGTLTSLPEICINLGILL 181
>12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387
Length = 487
Score = 37.1 bits (82), Expect = 0.011
Identities = 27/108 (25%), Positives = 44/108 (40%)
Frame = +2
Query: 185 ISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWML 364
+S+ +I + G I L+G+ A + D+ GRR T++ + L
Sbjct: 65 VSDAQIEVLSGAINIYSLVGALLAGWTSDRLGRRLTIVLTNGFFLAGPLVMSLAGGYAAL 124
Query: 365 MMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
M +F+ G + +Y AEI+ RG LS N G +L
Sbjct: 125 MAGRFVAGIGVGYALVIAPVYAAEISPASSRGLLSSLPEIFINGGVML 172
>04_04_1601 + 34707975-34708209,34708598-34709970
Length = 535
Score = 34.3 bits (75), Expect = 0.075
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = +2
Query: 185 ISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTL-LASMXXXXXXXXXXXXXTIGWM 361
IS + ++G L+GS A D GR++T+ LA+ + +
Sbjct: 96 ISEVQQEVLVGCLSFISLLGSLAAGRTSDAVGRKWTIGLAAAVFQAGAAVMTLAPSFA-V 154
Query: 362 LMMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
LMM + L G I V +Y +EI +RG+ + +LG LL
Sbjct: 155 LMMGRLLAGIGIGIGIMVAPVYISEITPATLRGSYASFPEIFISLGILL 203
>11_06_0421 +
23331702-23331723,23332161-23332197,23333397-23333533,
23333675-23334241,23335068-23335777,23335915-23336102,
23336489-23336918
Length = 696
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/97 (20%), Positives = 46/97 (47%)
Frame = +2
Query: 209 MLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWS 388
+L ++ G + + + ++D GRR L+ S ++L++ + +
Sbjct: 87 ILAVSVFGSIAITVFSGSLLDWLGRRAALIYSSLLLISGGLLMVWSPNIYILLLARLIVG 146
Query: 389 FGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLG 499
G+ ++ T IY +E + ++RG+L ++MF +G
Sbjct: 147 SGSGLVFTCVPIYISETSPPNMRGSLGTMPQFMFFVG 183
>03_03_0040 -
13999040-13999179,13999524-13999638,13999759-13999818,
14000007-14000060,14000274-14000333,14000418-14000480,
14000552-14000595,14000671-14000755,14000904-14001028,
14001368-14001432,14001460-14001518,14001678-14001743,
14001870-14001935,14002019-14002105,14002168-14002257,
14002378-14002440,14003153-14003419
Length = 502
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 359 MLMMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTR 481
ML + L F T IL V ++ AEIA K++RG L+ S +
Sbjct: 173 MLYFGRILLGFSTGILSYVVPVFIAEIAPKNLRGGLATSNQ 213
>04_04_0077 + 22568757-22568895,22568999-22569954,22570021-22570488
Length = 520
Score = 32.3 bits (70), Expect = 0.30
Identities = 23/91 (25%), Positives = 37/91 (40%)
Frame = +2
Query: 236 LIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAILCTV 415
L+ S A V GRR +L ML++ + L FG
Sbjct: 95 LVASLAAGRVTRWLGRRGVMLMGGALFFAGGAMTGGAVNVAMLIVGRMLLGFGVGFTNQA 154
Query: 416 QGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
+Y AE+A RG+L++ ++ +LG L+
Sbjct: 155 APLYLAEMAPPRFRGSLTVGFQFFLSLGILI 185
>11_04_0293 + 15926561-15928834
Length = 757
Score = 31.9 bits (69), Expect = 0.40
Identities = 21/87 (24%), Positives = 41/87 (47%)
Frame = +2
Query: 209 MLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWS 388
++ ++ IG I + + V D GRR L+AS ++L++ + +
Sbjct: 48 VVAMSLIGATIITTFSGPVSDLVGRRPMLIASSLLYFAGGLIMLWSPNVYVLLLARLVDG 107
Query: 389 FGTAILCTVQGIYFAEIADKDIRGTLS 469
FG + T+ +Y +E + +IRG L+
Sbjct: 108 FGVGLAVTLVPVYISETSPPEIRGRLN 134
>05_07_0239 -
28599452-28599564,28599685-28599799,28600051-28600116,
28600270-28600329,28600571-28600617,28601118-28601202,
28601554-28601646,28601727-28601791,28601942-28602017,
28602110-28602175,28603082-28603141,28603400-28603489,
28603594-28603893
Length = 411
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 422 IYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFISYQTLNLCLLFIPLTFLI 586
+Y AEIA + +RG L + +G LL G F+ ++ L++ L +P + LI
Sbjct: 153 VYIAEIAPQTMRGALGSVNQLSVTIGILLAYLLGMFVPWRILSV-LGILPCSILI 206
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 31.5 bits (68), Expect = 0.53
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 1/134 (0%)
Frame = +2
Query: 182 VISNTEISWML-GLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGW 358
V NT + M+ + G +IG+ + D++GRR ++L + T
Sbjct: 61 VDKNTWLQEMIVSMAVAGAIIGAAIGGWANDRYGRRTSILVADALFFAGAAVMASATGPA 120
Query: 359 MLMMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFISY 538
L++ + G +Y +E + IRG L +ST N L+I G F+SY
Sbjct: 121 QLVVGRVFVGLGVGTASMTSPLYISEASPARIRGAL-VST-------NGLLITGGQFLSY 172
Query: 539 QTLNLCLLFIPLTF 580
+NL P T+
Sbjct: 173 -LINLAFTKAPGTW 185
>03_03_0039 - 13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 31.5 bits (68), Expect = 0.53
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Frame = +2
Query: 185 ISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTL-LASMXXXXXXXXXXXXXTIGWM 361
+SN+E + IG +IG+ T+ + D GR+ T+ LA++ +GW
Sbjct: 1022 LSNSEYGVFGSVLTIGAMIGALTSGRLADSLGRKTTMGLAAIIGI-----------VGWF 1070
Query: 362 LMMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFISYQ 541
T V ++ +EIA KD+RG L+ S + G G +S++
Sbjct: 1071 -----------TIYFANVP-VFISEIAPKDLRGGLASSNQLFICSGCSAAYIIGALLSWR 1118
Query: 542 TLNLCLLFIPLTFLI 586
+L L L +P FL+
Sbjct: 1119 SLVLVGL-VPCAFLL 1132
>02_02_0155 +
7272563-7272630,7272934-7273031,7273491-7274057,
7275121-7276085,7276201-7276388,7276497-7276938
Length = 775
Score = 31.5 bits (68), Expect = 0.53
Identities = 23/100 (23%), Positives = 45/100 (45%)
Frame = +2
Query: 209 MLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWS 388
++ ++ IG I + + V D GRR L+ S ++L++ + +
Sbjct: 77 IVAMSLIGATIITTFSGPVSDWIGRRPMLILSSILYFLSSLIMLWSPNVYVLLLARLIDG 136
Query: 389 FGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
FG + T+ +Y +E A +IRG L+ ++ + G L
Sbjct: 137 FGIGLAVTLVPLYISETAPSEIRGLLNTLPQFSGSGGMFL 176
>04_04_0481 -
25541355-25541849,25541933-25542535,25542730-25542837,
25542925-25543260,25543391-25543461,25543692-25543824
Length = 581
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/130 (21%), Positives = 57/130 (43%)
Frame = +2
Query: 149 LLKFHNNETSVVISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXX 328
LL ++ T+V S ++ + G ++G+ ++ DKFGR+ ++L +
Sbjct: 51 LLYIRDDFTAVEKSTVLRETIVSMAVAGAIVGAGFGGWMNDKFGRKPSILIADSLFLAGA 110
Query: 329 XXXXXXTIGWMLMMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
+++++ + G + +Y +E + IRG L +ST N L
Sbjct: 111 LIMALAPTPFVIIIGRIFVGLGVGMASMTAPLYISEASPARIRGAL-VST-------NGL 162
Query: 509 VIGAGPFISY 538
+I G F++Y
Sbjct: 163 LITGGQFMAY 172
>04_04_1600 + 34704527-34704758,34705393-34706777
Length = 538
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +2
Query: 236 LIGSFTARFVIDKFGRRYTL-LASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAILCT 412
L+GS D GR++T+ LA++ + +LM+ + L G
Sbjct: 112 LLGSLAGGRTSDAVGRKWTIGLAAIVFQAGAAVMTLAPSFE-VLMVGRLLAGVGIGFGVM 170
Query: 413 VQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
+ +Y AEI+ RG+ + NLG LL
Sbjct: 171 IAPVYIAEISPAASRGSFTSFPEIFINLGILL 202
>08_01_0646 +
5592386-5592493,5592736-5592807,5592882-5593046,
5594218-5594454
Length = 193
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 202 IMDARTEPNWIPYRQFHGTLRYRQ 273
+ DA EP ++ RQ+HG LR RQ
Sbjct: 76 VTDAVVEPIYVNARQYHGILRRRQ 99
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 29.1 bits (62), Expect = 2.8
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 4/126 (3%)
Frame = +2
Query: 230 GFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAILC 409
G LIG+ FV DK+GRR LL S L+ +FL G
Sbjct: 263 GMLIGASGWGFVSDKYGRRICLLFSTLFASGMGFLSAFSPNYSCLLALRFLVGIGVG-GA 321
Query: 410 TVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAG----PFISYQTLNLCLLFIPLT 577
V +F E RGT + + +G +L +S++ L L L +P +
Sbjct: 322 HVFTSWFLEFVPAQNRGTWMVIFSCFWTIGTILEASLAWVVISVLSWRWL-LALTALPCS 380
Query: 578 FLIASF 595
LI F
Sbjct: 381 LLIPFF 386
>03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584
Length = 1218
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 468 ERVPLMSLSAISAKYIPWTVQRIAVPKLHKNCVIISIQPIV 346
+R+ L L A S KY+ W+ +V L K+ V+I+ + +V
Sbjct: 481 QRLILGELQAPSVKYVVWSSDMESVALLSKHAVVIANKKLV 521
>03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964
Length = 1218
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 468 ERVPLMSLSAISAKYIPWTVQRIAVPKLHKNCVIISIQPIV 346
+R+ L L A S KY+ W+ +V L K+ V+I+ + +V
Sbjct: 481 QRLILGELQAPSVKYVVWSSDMESVALLSKHAVVIANKKLV 521
>01_05_0334 -
21068575-21068642,21068723-21068813,21068955-21069071,
21069166-21069219,21069334-21070004,21070445-21070473,
21070576-21070643,21072382-21072621
Length = 445
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1
Query: 141 VGHAEHAPTAKKAKDTLNAARYCTFLLLSIYFA 43
V EH+ +A A +L+ +R C+F++L+ Y A
Sbjct: 205 VAAGEHSVSATSAAASLDLSRACSFVMLASYVA 237
>12_01_0210 -
1593732-1593823,1594730-1594773,1594895-1594983,
1595076-1595120,1595457-1595564,1595647-1595732,
1595872-1595959,1596159-1596335,1596531-1596606,
1596709-1596758,1596834-1596896,1597152-1597254,
1597337-1597439,1597559-1597619,1598119-1598159,
1599790-1599961
Length = 465
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Frame = +2
Query: 152 LKFHNNETSVVISNTEISWMLGLNPIGFLIG-SFTARF---VIDKFGRRYTLLASMXXXX 319
L F + V + +I + G +++G SF A F V D+ GR+ ++ S+
Sbjct: 68 LYFMVRDLQVAQTEEDIGYYAGFLGASYMVGRSFAAIFWGVVADRIGRKPVIVFSILSVV 127
Query: 320 XXXXXXXXXTIGWMLMMTQFLWSFGTAILCTVQ 418
T WM + T+F+ +L ++
Sbjct: 128 IFNTLFGLSTKYWMALTTRFVLGALNGLLAPIK 160
>01_01_0216 +
1843413-1843509,1844583-1844694,1844841-1844908,
1845165-1845297,1845404-1845503,1845562-1845722,
1846095-1846188,1846273-1846426,1846597-1846743,
1846819-1846892,1846985-1847073,1847161-1847275,
1847569-1847751
Length = 508
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 206 WMLGLNPIGFLIGSFTARFVIDKFGRRYTLL 298
W++ G GSFT + DKFGR T +
Sbjct: 94 WVVSTTLAGATAGSFTGGALADKFGRTRTFI 124
>04_04_0087 + 22718930-22719068,22719165-22719484,22721406-22722500
Length = 517
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +2
Query: 359 MLMMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNL 505
ML++ + L FG +Y AE A RG + + +GNL
Sbjct: 136 MLIVGRMLLGFGIGFTNQAAPVYLAETAPAKWRGAFTTGFQLFLGIGNL 184
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,090,210
Number of Sequences: 37544
Number of extensions: 326491
Number of successful extensions: 765
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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