Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d02f
(603 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0) 51 8e-07
SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011) 44 1e-04
SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28) 42 5e-04
SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034) 39 0.004
SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042) 38 0.006
SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11) 34 0.10
SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073) 33 0.18
SB_18740| Best HMM Match : MFS_1 (HMM E-Value=1.1e-15) 33 0.18
SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012) 32 0.31
SB_28947| Best HMM Match : Sugar_tr (HMM E-Value=2.1e-06) 32 0.41
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 31 0.95
SB_3045| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_42962| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_58328| Best HMM Match : MFS_1 (HMM E-Value=0.072) 28 6.7
SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03) 28 6.7
SB_21873| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_11519| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_55336| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_1564| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 512
Score = 50.8 bits (116), Expect = 8e-07
Identities = 29/145 (20%), Positives = 63/145 (43%)
Frame = +2
Query: 167 NETSVVISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXX 346
++ SV ++ ++ SW L +G ++G+ + ++ FGR+ T++A
Sbjct: 76 SKESVKLTVSQGSWFSSLVTLGAILGAPLGGWTLEYFGRKGTIMACAVPFEVGWMLIAYA 135
Query: 347 TIGWMLMMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGP 526
+ML + +F+ ++ +Y AEI+ +RG L + +G LL G
Sbjct: 136 NSHYMLYIGRFITGLAVGMVSLTVPVYIAEISSPSLRGMLGSVNQLAVTMGLLLAYSMGV 195
Query: 527 FISYQTLNLCLLFIPLTFLIASFWI 601
+ ++ L P ++ F++
Sbjct: 196 VLKWRWLACSGAIFPALLVVLMFFV 220
>SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 968
Score = 44.4 bits (100), Expect = 7e-05
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
Frame = +2
Query: 230 GFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAILC 409
G LIGS + D+FGRR LL +L + +F F A +
Sbjct: 637 GMLIGSLVGGWASDRFGRRLCLLVGSAIMTILSFGTFFADCPSLLALLRFGVGFALASVM 696
Query: 410 TVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFI-SYQTLNLC--LLFIPLTF 580
Q +Y E+ R + ++LG++L FI ++ L LC L F+P F
Sbjct: 697 VCQYVYVIELVGPKARTMSGKVQDFFWDLGDILSFTCAYFIREWRMLILCVTLFFVPFFF 756
>SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011)
Length = 468
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
Frame = +2
Query: 230 GFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAILC 409
G LIGS + D+FGRR LL +L + +F F A +
Sbjct: 124 GMLIGSLVGGWASDRFGRRLCLLVGSAIMTILSFGTFFADCPSLLALLRFGVGFALASVM 183
Query: 410 TVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFI-SYQTLNLC--LLFIPLTF 580
Q +Y E+ R + ++LG++L FI ++ L LC L F+P F
Sbjct: 184 VCQYVYVIELVGPKARTMSGKVQDFFWDLGDVLSFTCAYFIREWRMLILCVTLFFVPFFF 243
>SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28)
Length = 456
Score = 41.5 bits (93), Expect = 5e-04
Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 1/136 (0%)
Frame = +2
Query: 119 GACSAWPTPVLLKFHN-NETSVVISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTL 295
G C + + + N N T + ++ EI+W L IG ++G F+ID GR++ L
Sbjct: 55 GYCMGYSSAATTQLENKNATDLYLNADEITWFGSLLNIGAMLGGPIQGFLIDLIGRKFAL 114
Query: 296 LASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLS 475
+ + ML +F+ G + +Y +E A RG +
Sbjct: 115 ILTSVPFCSGWLLIGFGKNAAMLNAGRFMSGLGVGMASLNVPVYISETASFSNRGAMGSI 174
Query: 476 TRYMFNLGNLLVIGAG 523
+ G L+ G
Sbjct: 175 NQLGITAGILISYAIG 190
>SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034)
Length = 363
Score = 38.7 bits (86), Expect = 0.004
Identities = 33/126 (26%), Positives = 47/126 (37%), Gaps = 1/126 (0%)
Frame = +2
Query: 227 IGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAIL 406
+G+L GSF + V D FGR+ TL S+ T L++ F A
Sbjct: 157 VGYLFGSFLSGTVSDAFGRKITLTVSVALQAAAFIGASFVTSHIALIILIFFAGLSLASS 216
Query: 407 CTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFI-SYQTLNLCLLFIPLTFL 583
Q E+ D R + + G LL+I FI ++T L L L
Sbjct: 217 IACQYTLIIEMIGPDHRTIAGIINELFWKAGWLLIILVAYFIRDWRTFMLIGAAPGLAIL 276
Query: 584 IASFWI 601
+ WI
Sbjct: 277 LFWKWI 282
>SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042)
Length = 277
Score = 37.9 bits (84), Expect = 0.006
Identities = 27/102 (26%), Positives = 38/102 (37%)
Frame = +2
Query: 227 IGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAIL 406
+G+L GSF + V D FGR+ TL S+ T L++ F A
Sbjct: 154 VGYLFGSFLSGTVSDAFGRKITLTVSVALQAAAFIGASFVTSHIALIILLFFAGLSLASS 213
Query: 407 CTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFI 532
Q E+ D R + + G LL+I FI
Sbjct: 214 IACQYTLIIEMIGPDHRTIAGIINELFWKAGWLLIILVAYFI 255
>SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11)
Length = 302
Score = 33.9 bits (74), Expect = 0.10
Identities = 30/126 (23%), Positives = 46/126 (36%), Gaps = 1/126 (0%)
Frame = +2
Query: 227 IGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAIL 406
+G+L GS + + D FGR+ +L S+ T L++ F A
Sbjct: 63 VGYLFGSLLSGTLSDAFGRKISLTVSVALQAAAFIGASFVTSHTALIILIFFAGLSIASS 122
Query: 407 CTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFI-SYQTLNLCLLFIPLTFL 583
Q E+ D R + + G LL+I FI ++T L L L
Sbjct: 123 IACQYTLIIEMIGPDHRTIAGIINELFWKAGWLLIILVAYFIRDWRTFMLIGAAPGLAIL 182
Query: 584 IASFWI 601
+ WI
Sbjct: 183 LFWKWI 188
>SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073)
Length = 582
Score = 33.1 bits (72), Expect = 0.18
Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 4/147 (2%)
Frame = +2
Query: 170 ETSVVISNTEISWMLG-LNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXX 346
E +V ++ +WM + G+ IG+ + DK+GR L S
Sbjct: 397 EFDLVCDHSFTAWMANSMLFFGWAIGAIFLGIIADKYGRCSVLFPSAILVMGLSLAMAFV 456
Query: 347 TIGWMLMMTQFLWSF---GTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIG 517
W++++ +F F G + V A + + GTL +++ L+V+
Sbjct: 457 KKAWLVLVLRFFIGFFEGGGFLSMFVLATELVGPAKRALAGTLV----WIYFTAALMVLA 512
Query: 518 AGPFISYQTLNLCLLFIPLTFLIASFW 598
F LC++ I I FW
Sbjct: 513 LKAFFIRDWSTLCIISIAPFVFIVLFW 539
>SB_18740| Best HMM Match : MFS_1 (HMM E-Value=1.1e-15)
Length = 839
Score = 33.1 bits (72), Expect = 0.18
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
Frame = +2
Query: 230 GFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAILC 409
G L+GS V D+FGRR + S+ + ++ +F+ A
Sbjct: 128 GLLVGSLVFSAVSDRFGRRIGVFISIALLAVCGTTSGFSNCLSLFILLRFVTGMANAGCL 187
Query: 410 TVQGIYFAEIADKDIRGTLSLSTRYMFNLG-NLLVIGAGPFISYQTLNLCLLFIPLTFLI 586
V+ ++ E+ + R + T +LG ++L + A YQ L L + +P L+
Sbjct: 188 LVRYVFCMELISINHRTAVGFLTNIFVSLGFDMLSLLAYLIRDYQYL-LLAVSLPAAPLV 246
Query: 587 ASFW 598
FW
Sbjct: 247 L-FW 249
>SB_53613| Best HMM Match : Sugar_tr (HMM E-Value=0.00012)
Length = 466
Score = 32.3 bits (70), Expect = 0.31
Identities = 29/96 (30%), Positives = 35/96 (36%)
Frame = +2
Query: 227 IGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAIL 406
IG L GSF V D +GR+ L +FL FG +
Sbjct: 119 IGMLFGSFLTGMVSDAWGRKNCLFLFTGIMLAAGVASALVDCVSFFAFLRFLVGFGLSGA 178
Query: 407 CTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVI 514
Q IY EI R TL+ Y+F G LVI
Sbjct: 179 MLSQFIYLTEIVGPK-RRTLTGYVAYLFWGGFGLVI 213
>SB_28947| Best HMM Match : Sugar_tr (HMM E-Value=2.1e-06)
Length = 624
Score = 31.9 bits (69), Expect = 0.41
Identities = 25/120 (20%), Positives = 41/120 (34%), Gaps = 1/120 (0%)
Frame = +2
Query: 230 GFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAILC 409
G +GS + D FGRR + S +L + +F F A
Sbjct: 66 GMAVGSLLGGLISDAFGRRLCMFLSCGILVISGVAASFADCLSLLGLLRFCIGFSLASFM 125
Query: 410 TVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFI-SYQTLNLCLLFIPLTFLI 586
IY E+ R + ++ G L G F+ ++ LN+ +P F +
Sbjct: 126 LSSYIYMIELIGPQYRTMGGQISHVFYSPGYCLTALIGYFVRDWRYLNMTCCLLPAFFFL 185
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 30.7 bits (66), Expect = 0.95
Identities = 27/116 (23%), Positives = 41/116 (35%), Gaps = 1/116 (0%)
Frame = +2
Query: 170 ETSVVISNTEISWMLG-LNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXX 346
E +V + +SW + G+L G+ + DK+GRR L S
Sbjct: 82 EWDLVCEYSSLSWATNSIMFTGWLFGNIVFGILSDKYGRRKVLFISSCMVCWVAFASSFV 141
Query: 347 TIGWMLMMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVI 514
W+ + +F FG + I E R T Y F G L++I
Sbjct: 142 PYYWLYAVFRFFIGFGLGGSIVILFIMATEFVGPQKRAMAGTFTWY-FWTGALMLI 196
>SB_3045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 322 WNGHSRIRYNRLDAYDDAILVELWHGYS 405
W+GHSR R Y + +WHG+S
Sbjct: 414 WHGHSRTRGMSYTRYSTVTVHAVWHGHS 441
>SB_42962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 187 FQYGDIMDARTEPNWIPYRQFHGTLRY 267
FQ I+D+ P+W+ Y +G +RY
Sbjct: 42 FQIHTILDSMELPHWLMYGSIYGAMRY 68
>SB_58328| Best HMM Match : MFS_1 (HMM E-Value=0.072)
Length = 260
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 188 SNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLAS 304
SNTEI+ + ++PI +L+ +++D G R ++L S
Sbjct: 76 SNTEIAVLASMDPITYLVTMLFFSWMMDVKGLRKSMLVS 114
>SB_27872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 188 SNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLAS 304
SNTEI+ + ++PI +L+ +++D G R ++L S
Sbjct: 257 SNTEIAVLASMDPITYLVTMLFFSWMMDVKGLRKSMLVS 295
>SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03)
Length = 201
Score = 27.9 bits (59), Expect = 6.7
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +2
Query: 236 LIGSFTARFVIDKFGRRYTLLAS---MXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAIL 406
+IG+ ++FGR+ +LLA+ +L + +F+ +
Sbjct: 1 MIGALAGPLFANRFGRKRSLLANNGLAIVGALLMFLSYFAKTSPLLTVGRFVIGINCGMN 60
Query: 407 CTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIG 517
+ IY +E+A +RG SL T F + + L++G
Sbjct: 61 TAIAPIYLSELAPIHLRG--SLGTLNQFGIVSGLLVG 95
>SB_21873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 27.5 bits (58), Expect = 8.8
Identities = 24/124 (19%), Positives = 50/124 (40%), Gaps = 4/124 (3%)
Frame = -1
Query: 477 VDNERVPLMSLSAISAKYIPWTVQRIAVPKLHKN--CVIISIQPIVXXXXXXXXXXXXTI 304
++NE S S K+I W + ++N C +++I ++ I
Sbjct: 173 IENETFDKQSQSLYHIKWIQWKGLNTPIITQNENGPCPLLAIINVLLLQRRVSIPPMQEI 232
Query: 303 LANNVYL--LPNLSITKRAVKLPIRNPIGFSPSIHDISVLEITTEVSLL*NFSNTGVGHA 130
++++ + L + + + +LP + + ++HD + + L N TGVG
Sbjct: 233 ISSSQLMEYLGDCILAQAPERLPEGAQLNYEQNMHDAIGIMCKLQTGLDVNVKFTGVGDF 292
Query: 129 EHAP 118
E P
Sbjct: 293 EFTP 296
>SB_11519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 464 LSLSTRYMFNLGNLLVIGAGPFISYQTLNLCLLFIPLTFLIASFW 598
+++ RY+F+ G F ++FIP+ F+IAS++
Sbjct: 161 VAIGERYIFHPGKCFCFQENSFKPSTLFVSVIVFIPMCFIIASYY 205
>SB_55336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 771
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 380 LWSFGTAI--LCTVQGIYFAEIADKDIRGTLSLSTR 481
+WSFG + +CT+ G + IA KDI L R
Sbjct: 623 VWSFGVVLYEICTIGGEPYPGIAGKDIPDCLETGYR 658
>SB_1564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 416 QGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFISYQTLN 550
+G+ F E K + +S + N N ++ +GP IS+QT N
Sbjct: 691 KGVAFNENGYKSLPRKISKRRTAVVNRYNYCLVSSGPAISHQTAN 735
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,787,886
Number of Sequences: 59808
Number of extensions: 400764
Number of successful extensions: 2775
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2774
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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