Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11d02f
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical... 39 0.002
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 33 0.16
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 33 0.16
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 33 0.16
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 32 0.36
AF016425-10|AAB65334.2| 336|Caenorhabditis elegans Serpentine r... 31 0.84
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z67995-2|CAA91944.2| 458|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z99270-1|CAB16470.4| 500|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 29 2.6
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81527-2|CAB04270.1| 361|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z70203-5|CAA94108.3| 429|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z66567-7|CAC42386.3| 414|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical pr... 27 7.8
U97000-9|AAC47998.1| 345|Caenorhabditis elegans Seven tm recept... 27 7.8
U88170-8|AAB42244.1| 345|Caenorhabditis elegans Serpentine rece... 27 7.8
U28737-2|AAA68272.1| 455|Caenorhabditis elegans Patterned expre... 27 7.8
AF199013-1|AAG28557.1| 414|Caenorhabditis elegans organic catio... 27 7.8
>U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical
protein F48E3.2 protein.
Length = 488
Score = 39.5 bits (88), Expect = 0.002
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 12/142 (8%)
Frame = +2
Query: 119 GACSAWPTPVLLKFHN--NETS---VVISNTEISW----MLGLNPIGFLIGSFTARFVID 271
G +A+P + F NE++ +SN+E W ML + IGF GS + V D
Sbjct: 24 GYTNAYPNTAIGSFRIFLNESANEPYTLSNSEFEWAWSAMLAIYFIGFAAGSVISAGVAD 83
Query: 272 KFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMM---TQFLWSFGTAILCTVQGIYFAEIA 442
+ GR++TL I M +M ++ + S AI + F E +
Sbjct: 84 RIGRKWTLFLGTCGSLLSSLIALFAIILKMPLMFGFSRLVMSLSAAISMNGLILLFQESS 143
Query: 443 DKDIRGTLSLSTRYMFNLGNLL 508
+RG +S + F + NL+
Sbjct: 144 PSHMRGLISFNAEMAFVITNLI 165
>AC024843-10|AAF60845.2| 526|Caenorhabditis elegans Hypothetical
protein Y61A9LA.1 protein.
Length = 526
Score = 39.1 bits (87), Expect = 0.002
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Frame = +2
Query: 188 SNTEISWMLGLN---PIGFLIGSFTARFVIDKFGRRYT-LLAS---MXXXXXXXXXXXXX 346
S + W L LN PI + G F A ++ +FGR++T L+AS +
Sbjct: 86 STLHLLWSL-LNVCFPIATIFGQFLAGWMCSQFGRKHTALIASFLYIPGALLCAAAKWCF 144
Query: 347 TIGWMLMMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAG- 523
+L + + +WS + ++ E A IRG ++ + LG+LL G
Sbjct: 145 PAFELLFVGRIIWSLANGVNTVNATVWIVECAPPQIRGRMAAMQEFFMALGSLLTQAVGV 204
Query: 524 PF 529
PF
Sbjct: 205 PF 206
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 33.1 bits (72), Expect = 0.16
Identities = 27/125 (21%), Positives = 46/125 (36%)
Frame = +2
Query: 227 IGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAIL 406
IG +IGSFT + DK GR+ L + W+ + + F +
Sbjct: 155 IGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWWIYAILKAGTGFTQPGI 214
Query: 407 CTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFISYQTLNLCLLFIPLTFLI 586
V + E+ K R +++ +G +L+ FI L + IP I
Sbjct: 215 YGVAVVLGIELVGKKYRSFIAVIANVFGVIGGVLLAVMAYFIVDYRLLHASIAIPSLIFI 274
Query: 587 ASFWI 601
+W+
Sbjct: 275 TYYWM 279
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 33.1 bits (72), Expect = 0.16
Identities = 27/125 (21%), Positives = 46/125 (36%)
Frame = +2
Query: 227 IGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAIL 406
IG +IGSFT + DK GR+ L + W+ + + F +
Sbjct: 121 IGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWWIYAILKAGTGFTQPGI 180
Query: 407 CTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFISYQTLNLCLLFIPLTFLI 586
V + E+ K R +++ +G +L+ FI L + IP I
Sbjct: 181 YGVAVVLGIELVGKKYRSFIAVIANVFGVIGGVLLAVMAYFIVDYRLLHASIAIPSLIFI 240
Query: 587 ASFWI 601
+W+
Sbjct: 241 TYYWM 245
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 33.1 bits (72), Expect = 0.16
Identities = 27/125 (21%), Positives = 46/125 (36%)
Frame = +2
Query: 227 IGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAIL 406
IG +IGSFT + DK GR+ L + W+ + + F +
Sbjct: 155 IGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWWIYAILKAGTGFTQPGI 214
Query: 407 CTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFISYQTLNLCLLFIPLTFLI 586
V + E+ K R +++ +G +L+ FI L + IP I
Sbjct: 215 YGVAVVLGIELVGKKYRSFIAVIANVFGVIGGVLLAVMAYFIVDYRLLHASIAIPSLIFI 274
Query: 587 ASFWI 601
+W+
Sbjct: 275 TYYWM 279
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 33.1 bits (72), Expect = 0.16
Identities = 27/125 (21%), Positives = 46/125 (36%)
Frame = +2
Query: 227 IGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGWMLMMTQFLWSFGTAIL 406
IG +IGSFT + DK GR+ L + W+ + + F +
Sbjct: 121 IGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWWIYAILKAGTGFTQPGI 180
Query: 407 CTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFISYQTLNLCLLFIPLTFLI 586
V + E+ K R +++ +G +L+ FI L + IP I
Sbjct: 181 YGVAVVLGIELVGKKYRSFIAVIANVFGVIGGVLLAVMAYFIVDYRLLHASIAIPSLIFI 240
Query: 587 ASFWI 601
+W+
Sbjct: 241 TYYWM 245
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 31.9 bits (69), Expect = 0.36
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 227 IGFLIGSFTARFVIDKFGRRYTLL 298
+G + GSF + F+ DKFGR+ TLL
Sbjct: 109 VGGMFGSFCSGFLADKFGRKSTLL 132
>AF016425-10|AAB65334.2| 336|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 13 protein.
Length = 336
Score = 30.7 bits (66), Expect = 0.84
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 434 EIADKDIRGT--LSLSTRYMFNLGNLLVIGAGPFISYQTLNLCLLFIPLTFL 583
EI +K +R ++LSTRY + G I FISY L + L+ L FL
Sbjct: 214 EIKNKKLREVVDINLSTRYTLDQGRRSFIALKCFISYNCLMVSLITAGLMFL 265
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/105 (19%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Frame = +2
Query: 203 SWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASM---XXXXXXXXXXXXXTIGWMLMMT 373
S+++ + +G L GSF+ F+ + GR+ L S+ + + +++
Sbjct: 64 SFVVAVLFLGALAGSFSIPFIAEGVGRKNGLYISISVGVLAGGMSIASKFIPLFELYIIS 123
Query: 374 QFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLL 508
+ + + ++ + GI+ +E + K RG + + T LG ++
Sbjct: 124 RVVMGWSVSVSLGLSGIFLSEASPKQNRGAIGMMTGTAIQLGTVV 168
>Z67995-2|CAA91944.2| 458|Caenorhabditis elegans Hypothetical
protein M153.2 protein.
Length = 458
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +2
Query: 356 WMLMMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFI 532
W L + L FG +I+ T QG Y ++ K+ T S ++ ++ + ++G G F+
Sbjct: 101 WYLYASSALLGFGASIIWTGQGSYLSQNCTKE---TTSRNSSMLWAMSESSLLGGGIFL 156
>Z99270-1|CAB16470.4| 500|Caenorhabditis elegans Hypothetical
protein Y37A1A.3 protein.
Length = 500
Score = 29.1 bits (62), Expect = 2.6
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 5/127 (3%)
Frame = +2
Query: 155 KFHNNETSVVISNTEISW--MLGLNPIGFLIGSFTARFVIDKFGRRYTLLASM--XXXXX 322
K NN +S+ E W ++ + +G G+F + V ++FGR+ ++ S+
Sbjct: 61 KHSNNPDDNELSHLENEWSFIVAIFFLGSATGAFLIKTVAERFGRKKGVIVSLFAQVTSS 120
Query: 323 XXXXXXXXTIGWML-MMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLG 499
+ +L + +FL G I + ++ E + RG SL + L
Sbjct: 121 MLTIVSFWIVNHILFIFARFLMGVGITISMGIAAMFVTESSPAYCRGVSSLINGVLLQLS 180
Query: 500 NLLVIGA 520
+ +GA
Sbjct: 181 --ITVGA 185
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/104 (18%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Frame = +2
Query: 203 SWMLGLNPIGFLIGSFTARFVIDKFGRR---YTLLASMXXXXXXXXXXXXXTIGWMLMMT 373
S+++ + +G L GSF+ R + D GR+ Y +A + + + +
Sbjct: 64 SFVVAILFLGALAGSFSIRLIADWIGRKNGLYISIAVGVLAGGMSIASKFIPLFELYIAS 123
Query: 374 QFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNL 505
+ + + ++ + ++ +E + K RG + + T LG +
Sbjct: 124 RIVMGWSVSVSLGLSALFLSEASPKQNRGAIGMMTGTCVQLGTV 167
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 227 IGFLIGSFTARFVIDKFGRRYTLLASM 307
IG L+G+ F+ DK+GRR L+S+
Sbjct: 124 IGTLLGNIALGFLADKYGRRTIYLSSL 150
>U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical
protein F53H8.3 protein.
Length = 569
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 134 WPTPVLLKFHNNETSVVISNTEISWMLGLNPIGFLIGSFTARFVIDKFGRR 286
W + + S+ +SN S+++ IG ++G+ R + +K+GRR
Sbjct: 37 WINQTYIDRYKAPLSLTVSNVIWSFVVSSIAIGAILGASFTRIIGEKYGRR 87
>Z81527-2|CAB04270.1| 361|Caenorhabditis elegans Hypothetical
protein F35E12.2 protein.
Length = 361
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 460 HPLVVNKIHV*SWESSSHRCWPIHKLSNTKLVFAFY 567
H L+ H+ W S+ I+ +SNT +FA Y
Sbjct: 93 HILITPNQHIDQWSSAPSAILHINTISNTSQMFAIY 128
>Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical
protein K09E9.1 protein.
Length = 508
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 188 SNTEISWMLGLNPIGFLIGSFTARFVIDKFGRRYTLLASM 307
SN + M L G LIGSF F+ D+ GR+ L +
Sbjct: 111 SNQTTAMMSSLLMWGALIGSFVCGFLSDRLGRKPVYLGCL 150
>Z70203-5|CAA94108.3| 429|Caenorhabditis elegans Hypothetical
protein C05G5.5 protein.
Length = 429
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/35 (31%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 499 ESSSHRCWPIHKLSNTKLVFAF-YTVDFFDCLVLD 600
E++ +C P+ +S +++FA +TV +F+ +LD
Sbjct: 216 ETAEEQCNPVVSVSTNEIIFAIEHTVHYFEDKILD 250
>Z68296-1|CAA92589.2| 520|Caenorhabditis elegans Hypothetical
protein C46C2.2 protein.
Length = 520
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 227 IGFLIGSFTARFVIDKFGRRYTLLASM 307
+G LIG+ +V D+ GR+ T + SM
Sbjct: 117 VGVLIGNIILGYVADQIGRKKTFILSM 143
>Z66567-7|CAC42386.3| 414|Caenorhabditis elegans Hypothetical
protein ZK455.8b protein.
Length = 414
Score = 27.5 bits (58), Expect = 7.8
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 227 IGFLIGSFTARFVIDKFGRR 286
+G+L+G F F+ D++GR+
Sbjct: 28 LGYLVGCFVGGFISDRYGRK 47
>Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical
protein ZK455.8a protein.
Length = 757
Score = 27.5 bits (58), Expect = 7.8
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 227 IGFLIGSFTARFVIDKFGRR 286
+G+L+G F F+ D++GR+
Sbjct: 316 LGYLVGCFVGGFISDRYGRK 335
>U97000-9|AAC47998.1| 345|Caenorhabditis elegans Seven tm receptor
protein 135 protein.
Length = 345
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 530 ISYQTLNLCLLFIPLTFLIA 589
+ Q +NLCLLFIP F+ A
Sbjct: 128 VHLQGINLCLLFIPSIFVFA 147
>U88170-8|AAB42244.1| 345|Caenorhabditis elegans Serpentine
receptor, class h protein49 protein.
Length = 345
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 143 PVLLKFHNNETSVVISNTEISWMLGLNPIGFLI 241
P K + +E SV I + + W LG+ P G LI
Sbjct: 191 PCPTKLYFDECSVAIPSAKNIWALGVGPAGCLI 223
>U28737-2|AAA68272.1| 455|Caenorhabditis elegans Patterned
expression site protein23 protein.
Length = 455
Score = 27.5 bits (58), Expect = 7.8
Identities = 23/142 (16%), Positives = 54/142 (38%), Gaps = 4/142 (2%)
Frame = +2
Query: 188 SNTEISW---MLGLNPIGFLIGSFTARFVIDKFGRRYTLLASMXXXXXXXXXXXXXTIGW 358
+N + W ++ + +G +GS ++ D FGR+ S+ +
Sbjct: 74 TNVSVLWWENVIAIQQVGIFVGSILFGYISDHFGRQKVCQYSLLISSVILLVEGFLSSTI 133
Query: 359 MLMMTQFLWSFGTAILCTVQGIYFAEIADKDIRGTLSLSTRYMFNLGNLLVIGAGPFISY 538
++ + +F+ T + V E+ R +++ + G F +Y
Sbjct: 134 LIALCRFIIGTQTGAIIVVSWSLTTELISPRTRFLARAFANWVYR-RQFICYGKTVFSAY 192
Query: 539 Q-TLNLCLLFIPLTFLIASFWI 601
+ +L++C F L+ F++
Sbjct: 193 RISLHVCAAFTLFGALLYIFFV 214
>AF199013-1|AAG28557.1| 414|Caenorhabditis elegans organic cation
transporter protein.
Length = 414
Score = 27.5 bits (58), Expect = 7.8
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 227 IGFLIGSFTARFVIDKFGRR 286
+G+L+G F F+ D++GR+
Sbjct: 28 LGYLVGCFVGGFISDRYGRK 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,786,490
Number of Sequences: 27780
Number of extensions: 285654
Number of successful extensions: 812
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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