Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c22r
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.5  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   3.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.7  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 357 HFLSTFSWWKVYTYVH 310
           H+LS +SW KV+   H
Sbjct: 151 HWLSRYSWAKVFLVEH 166


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 357 HFLSTFSWWKVYTYVH 310
           H+LS +SW KV+   H
Sbjct: 151 HWLSRYSWAKVFLVEH 166


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 98  FIYLFKCMSVLCYNSF 145
           F+Y+F  +SV CY ++
Sbjct: 136 FLYIFTYLSVTCYVTY 151


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 5/8 (62%), Positives = 5/8 (62%)
 Frame = -1

Query: 701 CKGYWICW 678
           C  YW CW
Sbjct: 112 CTRYWTCW 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,623
Number of Sequences: 336
Number of extensions: 3613
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)