Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11c22f
(657 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.08 |tbp1|tdf1, tbp, SPAC30.12|TATA-binding protein |Sch... 59 5e-10
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 39 6e-04
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 37 0.002
SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces... 31 0.11
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 31 0.15
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.59
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 29 0.78
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 27 1.8
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 27 1.8
SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synth... 27 3.1
SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr 1||... 27 3.1
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 26 4.2
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 26 4.2
SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo... 26 5.5
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 26 5.5
SPAC14C4.06c |||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 7.3
SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces... 25 9.6
SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe... 25 9.6
>SPAC29E6.08 |tbp1|tdf1, tbp, SPAC30.12|TATA-binding protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 59.3 bits (137), Expect = 5e-10
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +1
Query: 388 LQNCVATVSLGCELKLLDIYCRTRYSEYNPARFQGVVMKILDPRATALVF 537
LQN VATV+L C L L I R +EYNP RF V+M+I +P++TAL+F
Sbjct: 58 LQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKSTALIF 107
Score = 33.1 bits (72), Expect = 0.036
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 376 SSIKLQNCVATVSLGCELKLLDI-YCRTRYSEYNPARFQGVVMKILDPRATALVF 537
+ K+QN V + + ++L + Y +S Y P F G++ +++ P+ L+F
Sbjct: 144 TDFKIQNIVGSCDVKFPIRLEGLAYSHGTFSSYEPELFPGLIYRMVKPKVVLLIF 198
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 39.1 bits (87), Expect = 6e-04
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +1
Query: 100 TLNKMEVSQENRVEKEHEGSISEMYSTPKTPIKAQNFSKEDA-GVSGTNLSSQVVNGDVA 276
T NK + SQ++ S +T +T AQ + E+ SG NL++ + ++
Sbjct: 249 TANKTDASQQSTESTSSSASAYSYITTLQTATTAQQTTSENTYSTSGPNLTTSNTSPQIS 308
Query: 277 LTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSI 384
T ++SSF + + S ++ T + +AST A ++I
Sbjct: 309 STISSSSFIVESPSVALSTSSTTTITNASTPAANTI 344
Score = 26.6 bits (56), Expect = 3.1
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Frame = +1
Query: 175 STPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVA--LTPTNSSFTPQPLNPHNSMTAL-- 342
STP T N S S N S+ + + V TP SS P S+TAL
Sbjct: 2517 STPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSLTALNS 2576
Query: 343 -TPMPSASTQAKSSIKLQNCVATVS 414
TP+ S+S S+ + V S
Sbjct: 2577 STPITSSSVLNSSTPITSSTVVNTS 2601
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 247 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSIKLQNCVA 405
SS VVN +T + + T P+ + + + TP+ S ST SS + + A
Sbjct: 3374 SSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS-STVVNSSTPITSSTA 3425
Score = 26.6 bits (56), Expect = 3.1
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +1
Query: 175 STPKTPIKAQNFSKEDAGVSGTN-----LSSQVVNGDVALTPTNSSFTPQPLNPHNSMTA 339
STP T A N S S N SS VVN +T + + T P+ + +
Sbjct: 3381 STPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSTVVNS 3440
Query: 340 LTPMPSASTQAKSS 381
TP+ S+S S+
Sbjct: 3441 STPITSSSVLNSST 3454
Score = 25.8 bits (54), Expect = 5.5
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Frame = +1
Query: 175 STPKTPIKAQNFSKEDAGVSGTN-----LSSQVVNGDVALTPTNSSFTPQPLNPHNSMTA 339
STP T + A N S S N SS VVN +T + + P+ ++
Sbjct: 2565 STPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNT 2624
Query: 340 LTPMPSASTQAKSS 381
TP+ S+S S+
Sbjct: 2625 STPITSSSVLNSST 2638
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 247 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSS 381
SS VVN +T + + T P+ + + TP+ S+S S+
Sbjct: 3026 SSTVVNSSTPITSSTALNTSTPITSSTVLNSSTPITSSSVLNSST 3070
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +1
Query: 247 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSIKLQNCVATVS 414
SS VVN +T + T P+ + + + TP+ S+S S+ + V S
Sbjct: 1514 SSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTS 1569
Score = 25.4 bits (53), Expect = 7.3
Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Frame = +1
Query: 175 STPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVA--LTPTNSSFTPQPLNPHNSMTAL-- 342
STP T A N S S N S+ + + V TP SS P S T L
Sbjct: 2469 STPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNS 2528
Query: 343 -TPMPSASTQAKSSIKLQNCVATVS 414
TP+ S+S S+ + V S
Sbjct: 2529 STPITSSSVLNSSTPITSSTVVNTS 2553
Score = 25.0 bits (52), Expect = 9.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 247 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSS 381
SS VVN +T + + T P+ + + + TP+ S ST SS
Sbjct: 1058 SSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITS-STVLNSS 1101
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 247 SSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSAS 363
SS VVN +T + + T P+ + + + TP+ S++
Sbjct: 1574 SSSVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSST 1612
Score = 25.0 bits (52), Expect = 9.6
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +1
Query: 175 STPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVA--LTPTNSSFTPQPLNPHNSMTAL-- 342
STP T A N S S N S+ + + V TP SS P S T L
Sbjct: 2769 STPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNS 2828
Query: 343 -TPMPSASTQAKSS 381
TP+ S+S S+
Sbjct: 2829 STPITSSSVLNSST 2842
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 37.1 bits (82), Expect = 0.002
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +1
Query: 100 TLNKMEVSQENRVEKEHEGSISEM---YSTPKTPIKAQNFSKEDAGVSGTNLSSQVVNGD 270
+L+ ++S EN S++ STP T I N S S +SS +++
Sbjct: 510 SLSSSQLSTENFTSASSSLSLTNAKSSLSTPSTTIPTSNSSVSLQTSSSLIISSPIISSS 569
Query: 271 VALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSI 384
+ T T++ + P N+ + +PS+ST SS+
Sbjct: 570 LTATSTSTPALTHSITPSNTSYTSSLIPSSSTDYSSSL 607
Score = 28.7 bits (61), Expect = 0.78
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = +1
Query: 157 SISEMYSTPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQPLNPHNSMT 336
S ++ S + + +NF+ + +S TN S + + +NSS + L +S+
Sbjct: 504 SFTKFSSLSSSQLSTENFTSASSSLSLTNAKSSLSTPSTTIPTSNSSVS---LQTSSSLI 560
Query: 337 ALTPMPSASTQAKSS 381
+P+ S+S A S+
Sbjct: 561 ISSPIISSSLTATST 575
>SPAC3G6.04 |rnp24||RNA-binding protein Rnp24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 369
Score = 31.5 bits (68), Expect = 0.11
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +1
Query: 205 NFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSI 384
+F+ EDA S + +NG L +N+ F+ +P P N+++ + S+ + S +
Sbjct: 171 DFATEDALKLALQCSEKALNGRNILIKSNTDFSGRPSKPANTLSKTASIQSSKKEPSSIL 230
Query: 385 KLQN 396
+ N
Sbjct: 231 FVGN 234
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 31.1 bits (67), Expect = 0.15
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 115 EVSQENRVEKEHEGSISEMYSTPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNS 294
E + N + G S+ S+P+TP+ + SK+ N +S+ NG+ TP S
Sbjct: 502 EKNDNNDASLQSAGVASDGESSPETPLTKASKSKKAKASKLANDTSKNANGETKSTPKKS 561
Query: 295 -SFTPQPLNPHNSMTA 339
T + NS TA
Sbjct: 562 KKKTSKAQQEANSTTA 577
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.1 bits (62), Expect = 0.59
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 178 TPKTPIKAQNFS-KEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQP-LNPHNSMTALTPM 351
T +P+ + S + T S+ V V T T+S+ TP P + ++ T+ +P+
Sbjct: 273 TNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPL 332
Query: 352 PSASTQAKSSIKL 390
PS ST +S +
Sbjct: 333 PSTSTSCTTSTSI 345
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 175 STPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTP--QPLNPHNSMTALTP 348
STP P + + + T+ S ++ PT +S TP + P ++ + TP
Sbjct: 314 STPPPPASTSSTGTSSSPLPSTSTSCTT---STSIPPTGNSTTPVTPTVPPTSTSSTSTP 370
Query: 349 MPSASTQA 372
P AST +
Sbjct: 371 PPPASTSS 378
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 28.7 bits (61), Expect = 0.78
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 181 PKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNSS 297
P+TP+ F AG + +N+SS V +G+ N S
Sbjct: 951 PETPLDTAYFDSRGAGAAESNMSSSVNSGEEVSKDNNVS 989
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 160 ISEMYSTPKTPIKAQNFSKEDAGVSGTNLSSQV 258
+S+MY + + ++FSK D G+S NLS +
Sbjct: 272 VSDMYLSADERNRLEDFSKGDRGLSFVNLSPNI 304
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 223 AGVSGTNLSSQVVNGDV-ALTPTN-SSFTPQPLNPHNSMTALTPMPSASTQAKSSI 384
A V+ T+ SS ++T TN +S P P HNS T P P+ S +++
Sbjct: 42 ANVTTTSFSSASTETSTHSVTSTNITSIVPPPSTSHNSTTTTVP-PTTSMNTTTTV 96
>SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synthase
Ade3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1323
Score = 26.6 bits (56), Expect = 3.1
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +1
Query: 226 GVSGTNLSSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSSIKLQNCVA 405
G SGT + VNG ++ F + + HN TA++P P A+T + I+ + V
Sbjct: 272 GNSGTLFAP--VNGIWSMKDEPVEFLGK-VETHNHPTAVSPFPGAATGSGGEIRDEGAVG 328
Query: 406 TVSL 417
SL
Sbjct: 329 QGSL 332
>SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1101
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 158 EPSC-SFSTLFS*ETSILFNVYSRISIHK*QRRSDHV 51
+PSC SFS L + + FN YSR K +RSD V
Sbjct: 591 QPSCLSFSKLN--DFVVFFNNYSRFEYEKESKRSDIV 625
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.2 bits (55), Expect = 4.2
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 328 SMTALTPMPSASTQAKSSIKLQNCVATVSLGCELKL--LDIYCRTRY 462
S L P P ST A S L N A SLG E+K +D++C Y
Sbjct: 203 SFAGLLPSPYLSTYAGSKAFLSNWSA--SLGEEVKKQGIDVWCFNSY 247
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 26.2 bits (55), Expect = 4.2
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 136 VEKEHEGSISEMYSTPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQPL 315
V K + +Y +P++ + + + D N NG + S FT Q
Sbjct: 322 VSKPPSSATGPLYHSPQSSLTNSSVASADVQERTHN-----TNGASPIQDQISEFTDQHQ 376
Query: 316 NPHNSMTALTP--MPSASTQAKSSIK 387
NP N+ A T + +A TQ +S K
Sbjct: 377 NPSNNDAASTQSILKTAPTQLSASAK 402
>SPAC22E12.14c |sck2||serine/threonine protein kinase
Sck2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 646
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 202 QNFSKEDAGVSGTNLSSQVVNGDVALTPTNSSFTPQPLNPHNSMTALTPMPSASTQAKSS 381
++FS D + LSS V NG T ++S + HNS + + + S +K +
Sbjct: 568 RDFSSTDEMSTSAPLSSTVQNGFKGFTYIDASAMDEAFGYHNSNDSASSISSQDDYSKDN 627
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -2
Query: 188 VFGVEYISLIEPSCSFSTLFS*ETSILFNVYSRI 87
VF +Y++L+ CSF+ F L+ Y ++
Sbjct: 9 VFSAQYVALVHTICSFAAFFIPLALALYTHYYQV 42
>SPAC14C4.06c |||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 25.4 bits (53), Expect = 7.3
Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Frame = +1
Query: 115 EVSQENRVEKEHEGSISEMYSTPKTPIKAQNFSKEDAGVSGTNLSSQVVNGDVA----LT 282
++ + + +EKE + +S P+T I+ Q S + ++ ++ G V LT
Sbjct: 91 KIDEIDFIEKESTDKSQQSFSVPETSIQPQ--SSQTPNITSLREEKELPTGRVGQKLKLT 148
Query: 283 PTNSSFTPQPLNPHNSMTALTPMPSASTQAK 375
F P + + S + + A TQ +
Sbjct: 149 SQKQRFNPMAASFNYSKSVMPAAKRALTQTQ 179
>SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1155
Score = 25.0 bits (52), Expect = 9.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 186 FWC*IHFTDRTFMFFFNPIFLRDFHFI 106
FW ++FT R F +F + D F+
Sbjct: 7 FWIRLYFTFRFFCYFLTSVVASDVSFL 33
>SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 972
Score = 25.0 bits (52), Expect = 9.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 327 FYDCFNTYAKCIHSSKKQYQATKLC 401
F DC N ++KC K++ K C
Sbjct: 288 FNDCLNMFSKCFKFLKQKLSDRKSC 312
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,505,401
Number of Sequences: 5004
Number of extensions: 48768
Number of successful extensions: 250
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -