Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11c22f
         (657 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   7.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   7.8  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   7.8  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   7.8  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 393 KLCCHSQFRM*TKIIRYLLQNK 458
           K C   Q  +  K+I++L++NK
Sbjct: 77  KKCTDKQREVIKKVIKFLVENK 98


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 346 PMPSASTQAKSSIKLQNCVATVSLGC 423
           P+P  + + K+ +KL +   T+  GC
Sbjct: 413 PVPLIAREIKTDLKLASGDYTIPAGC 438


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 103 LNKMEVSQENRVEKEHEGSISEMYSTPKT 189
           LN+M  S  N ++KE +    E+ + PK+
Sbjct: 450 LNRMYKSYPNYIDKETKDMNLEISTRPKS 478


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 393 KLCCHSQFRM*TKIIRYLLQNK 458
           K C   Q  +  K+I++L++NK
Sbjct: 77  KKCTDKQREVIKKVIKFLVENK 98


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 393 KLCCHSQFRM*TKIIRYLLQNK 458
           K C   Q  +  K+I++L++NK
Sbjct: 77  KKCTDKQREVIKKVIKFLVENK 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,897
Number of Sequences: 438
Number of extensions: 3181
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)